KEGG   Chanodichthys erythropterus (predatory carp): 137029228
Entry
137029228         CDS       T10334                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery03018  RNA degradation
cery03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cery00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137029228 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137029228 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cery03019]
    137029228 (lsm7)
   03041 Spliceosome [BR:cery03041]
    137029228 (lsm7)
Messenger RNA biogenesis [BR:cery03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137029228 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137029228 (lsm7)
Spliceosome [BR:cery03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137029228 (lsm7)
SSDB
Motif
Pfam: LSM InhA-like_MAM
Other DBs
NCBI-GeneID: 137029228
NCBI-ProteinID: XP_067254889
LinkDB
Position
10:complement(19918283..19921640)
AA seq 108 aa
MGFINKHDKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYM
RDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 327 nt   +upstreamnt  +downstreamnt
atggggtttataaacaagcatgataaagataagaaaaagaaggagagtatttttgatttg
tcgaaatacatcgacaaacatataagagtaaagttccaaggaggtcgagaagcaagtggt
gtcttaaaaggcttcgacccgctgttgaatcttgtgttggatggcactattgaatacatg
cgagatcctgatgatcagtacaagctgaccgaagacaccaggcagctcggtctggtggtt
tgtcgagggacgtccgtcgtgcttatctgtccacaggacgggatggaggccattccaaac
cctttcattcaacagcaggatggataa

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