Chanodichthys erythropterus (predatory carp): 137029728
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Entry
137029728 CDS
T10334
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137029728 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137029728 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137029728 (pcdh1a)
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137029728 (pcdh1a)
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Protocadherins
137029728 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
137029728
NCBI-ProteinID:
XP_067255493
LinkDB
All DBs
Position
10:49537716..49630641
Genome browser
AA seq
1190 aa
AA seq
DB search
MDLPVVLFLLWGLLLDLLSGAVGGILYRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVG
APYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIE
VQDINDNTPQFPSPVLTLSVPENTHMGSLFSIPLATDKDTERNGVADYTLTAGPEAVALF
GLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNA
PTFEKSSYEAEVAENSPIGHSVLQVKANDSDMGPNGEIEYTLHQAIDPVPKLLRIDRSSG
IIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTH
SDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYF
LQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAE
ENQPGEKVVDVVASDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKER
YEFRVTAADKGVPSHRGTATVIIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQ
DMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSS
YVGVTINVLDENDNAPVVTKPSNSSFMRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIA
GGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVVKVSDRGKPSRHAIALVHIYVNETIA
NVSHVEALVGHSLYTPLDMDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIVVVVFIRHR
LQREAKSGYQAGKKETKDLYAPKQGPKSGKGRKGKKGKPPKSPKPLGEDEEVSLQKSLKF
NLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQELPAAN
TFVGTGGDDNSTGSDQYSDYSYKTNQPKYSTKTLPHRRVTFSTANPVQDQQDSSQQSYYD
SGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPETDIRSLPDVAMTGNC
SQECSELGHSDACWMPGQPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGGEENRP
RLPPSRSAYSSSDHTPSDHAPLEEVPLSVTSEFPPTSPPSNHASKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctgtggtgttgtttctgctgtggggactgttactggacttgctgagtggt
gcggtgggaggcattctataccgtgtacatgaggaacagcctccaagcacactgattggc
agcctggcggctgaccaggggctaccagacactggacacctgtacaaactagaggtgggc
gctccctatctgcgggtggatggcaaaactggagatatctttaccactgagatccccata
gacagagagacactgaaggattgtcgtaataaaggcaagccctgcttcctggagtttgag
gtgtccgtcacagaccttattcaaaatcagagtccacggctgatagagggaaggatcgag
gtgcaggatatcaatgataatacaccacaattcccctcacctgtccttaccctctcagtt
ccagagaacacccacatggggtcactcttttcaattccactggccactgacaaagataca
gagaggaatggagtagctgactacaccttaacggcaggaccagaggctgtagcactcttt
ggtctgcaagttgcagaggaccgaggtgaaaaattgcctcaactcattgtgttgggaagt
cttgatcgagagctgaaagactcctatgacctcaccatcaaagctgtggatggaggcaat
ccacctcgctacagcagtgccttgctgagggttgtcattgctgatgccaacgacaatgca
cccacgtttgaaaaatcctcctacgaagcagaggttgcagagaacagcccaatcggacac
tctgtgttacaggtgaaggctaatgattcagacatgggtcctaatggcgagattgaatac
acattacatcaggccattgatcctgtgccaaaactgctccggatagaccgctcatcaggc
atcatatatgtcaaaggcccattggatcgtgaggaaatcaacaatttgaaattttatgtc
gttgcacgagataaaggcccctcacccaaaagttctaaaacgtatgtttctattgatgtg
acggaccagaatgacaatgcaccagcagtggagattcgaggcattggtcttgtgactcat
agtgatggggtagcaaacatttcagaggacatgccagttggcactgcagtggcattggta
caggtttcagataaggatgagggagagaatgccgtggtgacctgtgtggttgcaggtgat
gttcctttccagcttcggccagcaagtgattcatcagttgacaacaagaggaagtacttt
ctgcagacgacaacacctctggactatgaaagagttagggactaccgggtagagatagtg
gcagtggattcaggtaatccagctctgtccagcactaactcactaaaagtccaagtgact
gacacaaatgacaattcccccattttctcaccaaccctgtttgaagtggagtttgctgag
gagaaccaaccaggagaaaaggtggtagatgtagttgcctcagatgcagacagtggcacc
aatgcagagcttgtctacagcattattgcagactcttcaacaagggggctttttgagatt
gaccccagctcaggcgaagtacgtgctcgaagccctcttgatcgtgagcacaaggagcgc
tatgagttccgtgttactgcagctgataaaggggttcccagtcacaggggaactgccaca
gttataatcaaagtacttgatcggaatgacaatgatcctaagttcatgttgagtggctac
agcttctcagtcttggagaacatgccacctcttagccctgttggcatggtaacagtacag
gacatggatgagggcgagaatgctcaagttcaactttctgtggaaccggatgtgggcaaa
tttgtgatccagaatggtactggcactattctgtccagtatctcatttgacagagagaag
gagagcagttacacattccggttgaaagctgtagatggaggggacccacccaggtcatcc
tacgttggagtgacaatcaatgtcctcgatgagaatgataatgcacctgttgtcaccaaa
ccatctaactcatcctttatgcgtctgtctcccatggctgctccagacagtgttgtagaa
gtggttgaagcagaggacattgattctggttccaatgctgaactagtatacagcattgct
gggggaaatccacatgaccttttttacatctctccatctaatggcgagatcacactaacc
aaggaactaactcgaaaacatagtggtctgcatcgactggtggtaaaagtgagtgacagg
ggcaaaccatcccgtcatgctattgccttggtacacatttacgtaaatgaaaccattgct
aatgtaagtcatgtggaagcacttgtggggcatagcttgtacaccccactggatatggac
attgcaggagacccagattatggtttggctgcccagaggagcaacattgtatatggcagt
ttagctggagtggcgggagtggtcactgtgattgttgtggtggtcttcatcaggcatcgc
cttcaaagagaagctaagagtggttatcaggctggcaagaaggagaccaaagatttgtat
gcccccaagcaagggccaaaaagtggcaaggggagaaagggtaaaaaaggtaagccacca
aagtcacctaaacctcttggagaggatgaggaagtcagccttcaaaagagtctgaaattt
aatcttgatggggtcaacgacagccccaggatccatttgcctctgacatatccacctggg
agccctgacctaggcaggcactaccgttccaattccccattgccctccatccagctccag
gcccagtccccatctgcctcccaaaagcatcaggctgtccaggagctccctgctgccaac
acctttgtgggaacaggcggtgatgacaactccaccggctcagaccagtactcggattac
agctacaagaccaatcaaccaaaatacagcacaaaaacgctcccgcatcgcagagtgacg
ttctccacagccaatcccgtgcaagatcagcaggactcctctcagcaaagttactatgac
agtggcttggaggagtccgagacccccagcagcaagagctcttcaggaccccgtatcggc
cccctcgccctgcccgaggaccactacgaacggaccacccctgatggcagcatcggagag
atggaacacccagaaactgatatccgctcattgcctgatgttgccatgacgggaaactgc
agccaggagtgcagcgagcttggtcattcagatgcctgttggatgcccggtcagccttcg
cccgtccgcaagacccgcaacccccctaaactgtccacgtttgtgccttatcaggagagg
gggagcctgggacgcctggccaatgggagcgtgaggctgggaggagaggagaacaggcca
cgcctcccaccttcccgtagtgcctactccagtagtgaccacacccccagtgaccacgcc
ccactagaggaggtgcctctaagcgtgacatcagagttcccgcctaccagccccccctcc
aatcacgcctcaaaaagagagatatacctgtga
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