Chanodichthys erythropterus (predatory carp): 137029872
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Entry
137029872 CDS
T10334
Symbol
copb1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137029872 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137029872 (copb1)
Membrane trafficking [BR:
cery04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
137029872 (copb1)
Exosome [BR:
cery04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
137029872 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
Cnd1
HEAT_2
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
137029872
NCBI-ProteinID:
XP_067255707
LinkDB
All DBs
Position
11:complement(36149980..36165946)
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AA seq
955 aa
AA seq
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MTAAENVCYTLINVTNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQVYDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVI
VLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAA
DVLEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTE
VRRSMGEIPIVENELKKEAGEVKPEEEMTATPAPKLVTEMGTYVTQSALSTSRPSKKEED
RPPLRGFLMDGDFYVAASLATTLTKVALRYVALAEDKKRQNSFVAEAMLFMATVLHLGKS
SLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEKLSQKKES
EKRNVTVQADDPISFMQLTAKNEMASKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQ
LTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLA
PHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDA
EFRQMWAEFEWENKVTVNTNITDLNEYLLHILRSTNMKCLTPEKALSGICGFMAANLYAR
SIFGEDALANVSIEKPIHMGPDAPVSGHIRIRAKSQGMALSLGDKINLSQKKSLS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcggagaatgtgtgttacaccctcatcaatgtcaccaatgactctgaaccg
ccatcagaagtcagcttaaaagctgatttagaaaagggagaaatcaaagccaagacagag
gctttgaagaaggtcatcatcatgatccttaatggagagaaactgccaggcctgttaatg
accatcatccggtttgtgctgcctctgcaggaccacacaattaagaaattactcctagtt
ttttgggagattgttcccaaaactactcctgatggcaaacttcttcaggagatgatcttg
gtctgtgatgcctataggaaggatctccagcatcccaatgagttcatccgtggctccact
ctgcgcttcctgtgcaagctgaaggaatctgagctgctggagccccttatgccagcgatc
cgcgcctgtctggagcaccgtcacagctacgtacgacgcaatgcagtcctggccatctac
actatctacaggaactttgagcatttaatcccagatgctcctgagctgattcatgatttt
cttgtaaatgagaaagatgcaagctgcaagagaaatgcgtttatgatgctgattcatgca
gatcaggatagagctctggactaccttagcacatgtattgatcaggtgcatactttcgga
gacattctccagctcgtcattgtggaactaatttataaggtctgtcatgccaacccctcg
gagagagctcgtttcatccgttgtatatacaatctgctgcagtcgtctagtcctgctgta
aaatatgaagcagctggaactctggttactctgtccagcgctcccaccgccatcaaggct
gctgctcagtgctacattgatctgatcattaaagagagtgacaacaatgtaaagctcatt
gttctggaccggctgattgagctgaaggaacaccccacacatgagcgtgtgctgcaggta
tacgaccttgtgatggatattctgagggttttgaccactcctgatcttgaggtccgcaag
aagaccctacagctggccttggacctggtgtcctcccgcaatgtagaggagctggttata
gtgctgaagaaagaagtcatcaaaaccaacaatgtaacagagcatgaagacacagacaag
tacaggcagctgcttgttcgcactctccactcgtgtagtgtgcgcttccctgacatggca
gccaatgtcatccctgtgctgatggagttcctgagtgacactaacgaggcggccgcagct
gatgtgctggagtttgtgcgtgaggcgattcagaggtttgacaaccttagacctctcatc
attgagaagatgctggaggttttccatgctatcaagacggtcaagatttacagaggagct
ctgtggattttgggtgaatattgcagcacgaaagaggacatccagagtgtcatgacagaa
gtccgcagatctatgggagagatcccaattgtggagaatgaattgaagaaggaagcggga
gaggtgaaacctgaggaagagatgactgcaactccagctcctaagctggtgacagaaatg
ggcacctacgtcactcagagtgccctgagcaccagcaggccatccaagaaagaagaggac
aggcctcctctaaggggtttcctgatggatggagacttttacgttgctgcctcattggcc
accactctcaccaaagtggccctgcgctatgttgctcttgccgaggacaaaaaaagacaa
aattcatttgtggccgaggccatgctgttcatggccactgtgctccatctgggcaagtcg
tctctacccaagaagcccatcactgatgatgacgtggacaggatctcgctatgcctcaaa
gtcctgtctgaatgctcgcccctcatgaacgacatcttcaacaaggagtgccgcagatcc
ctgtcccatatgcttgctgtcagactggaggaggagaaactgtctcagaagaaagagtct
gagaagcgtaacgtgactgttcaggcggatgatcccatctccttcatgcagttgaccgct
aagaacgagatggcgtccaaagaagatcaattccaactcagtctgctggccgctatgggc
aatactcagaggaaagaagctgcagaccctctggcatctaaacttaataaggtcacccaa
ttgactggtttctcagatccagtgtatgcagaagcttatgtccacgtcaatcagtatgac
attgtcctggatgtcctggttgttaatcagacaagcgacaccctccagaactgtaccttg
gagcttgcaacacttggtgatcttaaattggttgagaaaccatctcctctcacattggct
cctcacgactttgccaacattaaagctaatgtgaaagtggcctccacagagaatggcatc
atatttggaaacatagtatatgatgtatcaggagcagccagtgacaggaactgcgtagtc
ctaagcgacattcacattgacatcatggattacattcagccggcttcctgcacagacgct
gagttcagacagatgtgggctgaatttgagtgggaaaataaggttaccgtcaacaccaac
atcacagatctgaatgagtatctcctacacattcttaggtccaccaacatgaagtgcttg
accccagagaaggccctgtccggcatctgtgggttcatggcagcaaatctgtatgctcgc
tctatatttggagaggatgcccttgcaaacgttagcattgaaaagccaatccacatggga
cctgatgccccagtcagtggacatattcgcattcgagccaaaagccagggtatggctttg
agcttgggtgacaagatcaacctctctcagaagaagtctctctcgtaa
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