Chanodichthys erythropterus (predatory carp): 137029907
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Entry
137029907 CDS
T10334
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137029907 (focad)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137029907
NCBI-ProteinID:
XP_067255790
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Position
11:complement(37542935..37625777)
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AA seq
1807 aa
AA seq
DB search
MTETLKTRFEFPCSLIQAQAVRTLVTAVLKEKGQNEKICQTSTKGQALESLWEQCSSDST
VVRSACCNALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA
RFTCPYSIRSFPHPYITVLENRPDCWPALLQEIDDFLQLATDKDEPVYVEMLVPFLRYLY
CEPQRLPENALLRHSLLRVLLQPRGAPELDSLQEKGASGTRVVRELIRSLFDLLPYMLVD
SITAVVEFSSFAESLTSALLTDPGFWRKELTQLALQLLCACQLSVHLKGELMSLLHTLHQ
IIPAHAEELPSEQVIIGISLLLLSASTSQQTALLELAVKIVPPEVPPPWGASLLVMPLLQ
VLSCSSLMEALTDTQTHTKNLKLANSLLQMVQRESSDQKEDSTQLSLPLSTWYIELQVAT
SVLQRISLDSMSSVEWLYSLQSSLPACEHVPDTVCLLVSHVIVSSYGDLCRLALETAAAI
AEADPSKVPCLLPVLMFKLGRVSDPDLSLSVLYTLPRLGTHKFCIPQVLHVLQTLGSSSR
LRPVALRLLALLWKKQDRVYPDLQRLMSQLEKSSVVMGKDTQWEQILARAACVRDICKER
PYQHGGDMLAAISDTLLQFSRKDQATPAALALQGLQELCRAEVVDISSTWKALSPKLCCD
TRPLVLKATAELLALVPALNVKTEEYEKFRNEAVSVLWGYALSQDPEVASQGFKALSEYP
EPSHTILHLPEQARPIPKQPDEEDEEKENENEKDEDISVPGASYLKLVCLTPQSILPALE
TFLTSLARQEMNQMPRGVYHSALTRGNLRTDQGKTVSGIPSFMLKTYEKNKQPGLKPGLA
AGLLLCYDLPVQTDKDGRPINRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWR
GFMSRAYHAVLQGRKAELEMLQKQGKESPEELQFKQHYAWLWVRDQLTDVVKSAAKDSPV
VQGNSILALSGLAVVLTRYESNLPTQSESGFEVGPDTLPTVHWLSMVTDTLLSIVSSSSN
PKGQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSRRESVPAILGTLAAGLPD
SPTADESQAVQFHSGLALGMFLAWLHDERVSDISGQSVAELLLKHLERLEMCCFNPNLEY
NAGCVLGVGLVLSSLSSSSQSERDRAHVSLILDRLLQTLQDSSSMSRMLQEVLAYSVACI
GVSAFNSGIIEASKAEESMNTLRSLTEESQQTPGFALALGLTVFGLSSFGHGKAMDIQPR
LLAAWTKILLAEGCPTMQRLSALNGLIALVGSETALIQLKSETEESSQQQGRLNEVIRAI
TQIITFSGTIGLQSNGACLLGHLHLAHMCSSHSRTAVPQDFSYLPERSVIRASVDFITEA
GRKGPEFTAPILVKTVLATLGAVGGSFQYPPVNWSAVLSPLMRLGFGEEVQHHCLELAVS
QAQSSQSASLFLSIWLVPPLVHSLSLRTRAYLYECLSSWMKHVAEDKLQVYVDSLAVQQF
EPDTRAQRLPLCLSILRGLSKAMAVPNPPQNCWTALCSATEKIYNLLPDNIPAAEVDLYE
ATCSCLSELSDPEIDRIIKVNEANVEKTAFILTYLTSKGRVPLLGLNDVISTILQVGNIK
RISWLLLQGLHQSRFASSPNTGVSKRIEWLLELMGHIRNVAYGSPSAKCVNVIEGTDFLL
GVFAAAVASWADHCTPLLIGIRTQWFPWQQSSQITELTHALYVSPATTELSVASCQSAIP
YSIKQLLAKEPWKSQSQKFIDWLFSITEGPKLSFSETAVLTARAALMALRSTSEFKKKGV
WTRAYGW
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactttgaagacaaggtttgagttcccctgctccctcattcaagctcaggct
gtgaggacactggtcactgcagtgttgaaagagaaaggccaaaatgaaaagatttgtcaa
acttccactaaagggcaagcgctggagtctctgtgggagcagtgcagcagtgatagtact
gtcgtccgctcggcttgctgtaatgctttggtgctactcgtggaacaggggcatgcagat
ctgccatatgtgctcaacaccaccctaaacctcctgccctcggcacggaatgttcaaggg
ctgatcaaagtggttgggaggctgctgcagatccaggcaagtcagcgggacaacggagca
aggttcacctgtccatattcaattaggagctttcctcatccctacatcacagtgctggaa
aaccgccccgactgctggcccgctctgctccaggaaattgatgactttcttcagctggct
acggacaaagatgagccagtgtatgtggaaatgctggtaccgttccttcgttacctgtac
tgcgagccccagaggttgcctgaaaatgctctgctcagacacagcctcctcagggtcctg
ctccagccacgaggggctcctgagcttgacagcctgcaggaaaagggggcgtccggcact
agggtggtccgggagctgatccgcagcctctttgacctgcttccatacatgctggtggac
agtataacagcagtggtggagttcagctcatttgctgaatctctgacatcggctctgctc
accgatccaggcttctggaggaaggaactgacccagctggctcttcagctcctgtgtgcc
tgtcagctcagtgttcatctgaagggagaactgatgtctctccttcacacactccaccag
ataatacctgcacatgcagaggaactcccgtctgagcaagtgatcatcggaatctccctg
ctactgctaagcgcctccacttctcagcaaactgccctcctagagctcgctgtgaagatt
gtcccacctgaggtgccacctccctggggtgcatctttgctggttatgcccttgttacag
gtgctgtcctgctccagcctcatggaagcccttacagacacgcaaacacacacaaagaac
ctaaaactggccaattcactgttgcaaatggttcaaagagaatcctccgatcagaaagag
gactccacacagctgagtttgcctctcagcacttggtacatcgagcttcaagtggccacc
agcgtcctacagcgaatttctctagactccatgtcttctgtggaatggctttactccctg
cagtcatctctccctgcctgtgaacacgtcccagatactgtttgtcttttggtctcccat
gttatcgtcagcagttacggggatctctgcaggttagcgttggaaacagccgctgccatt
gccgaggccgatccttctaaggtgccatgtctacttcctgtcctgatgtttaaactgggc
cgagtgtctgatccagatttgtctctctctgttctctataccctgccaagactgggaacc
cacaagttctgtatcccgcaggtgcttcatgttctccagactctgggcagttcatccaga
ctgaggccagtggctctgcggctcttggctctgttatggaaaaaacaggaccgtgtgtat
ccagacctgcagagactgatgtcacagcttgaaaaatcctcagtggtcatgggaaaagat
acgcagtgggagcagatattggccagagcagcttgcgtcagggacatctgcaaagagaga
ccgtaccagcacgggggagacatgctggctgccatcagtgacacactgctgcagttctcc
aggaaggatcaggccactcctgctgctctggcactgcagggcttacaggagctctgtagg
gctgaggtagttgatatcagctccacgtggaaggcactctctcctaagctgtgctgtgac
accagacccctggtcctgaaggccacagctgaacttctggcactagtacctgctttaaat
gtcaaaacagaagaatatgagaaattcagaaatgaggcagtgagtgttttatggggctat
gctctcagtcaggacccagaggttgcaagccaaggttttaaagccctctcagagtatcct
gaaccatctcacaccatcctacacttaccagaacaggccaggcccataccaaagcagcct
gatgaggaggatgaagaaaaggaaaatgagaatgagaaggatgaagatatttcagtacca
ggagcgtcatatctgaaactagtttgtctcacaccacaatccattttaccagcccttgag
accttcctaacatctctagcgaggcaggagatgaaccaaatgccccgcggcgtgtaccat
tcagcactgactagggggaatttgcgcactgaccagggaaaaactgtatctggaattcct
tctttcatgctgaaaacctatgagaagaataagcagccaggtcttaaacctggcttagca
gctgggcttctcctatgttatgaccttcctgttcagactgacaaagatggacgtccaatc
aaccgcttccttgtcagcagagggcggagttatcaacaaatgttagccacccttattcat
gaggtgaacatccagccatctgagtggcatcgctctctgcttttgcctcaggcctggcgg
ggcttcatgagccgggcttaccatgcagttctccagggtcgaaaggcagagctggagatg
ctacagaaacagggtaaagagagtccagaggaactgcagttcaaacagcactatgcctgg
ctctgggtcagagaccaactgactgatgtggtcaagtctgccgccaaagatagtccagtc
gttcagggtaattctattttagcactaagtgggctggctgtcgtcctaaccagatacgag
agcaaccttcctacacagtctgaaagtggatttgaggtgggtccagacacccttcccaca
gttcactggctgtctatggtgactgacacactgctcagcattgttagcagtagcagtaac
cctaaaggacaagtcttcccatggttcattcatcgctcatactccggtgagaacacagcg
agtgtgatcgcgcgatcctgtgctgctctcggtctggcgttgctggtgcccgtgttggtg
acctcacgcagagagagcgttcctgctatactgggcactctagcggcgggactgccggac
tcccccactgcagacgaatctcaggcagttcagtttcacagcggcctggctctgggcatg
tttctagcatggctgcatgatgagagggtcagtgatatatctgggcagtcagttgcagag
ctgctattgaaacatctggaacgactggaaatgtgttgcttcaatcccaatctggagtac
aatgctggttgtgtgttaggtgttggtttggtcctgagttctctcagtagcagtagtcag
tctgagcgggaccgtgcgcacgtgtctctgattctggacagactcctgcagaccctgcag
gacagcagcagtatgagccgcatgttgcaggaggttttggcctattctgtggcatgtatt
ggagtttcagcatttaactcaggcattattgaggccagtaaagccgaggaaagcatgaac
acacttcgctccctgacggaggaaagccaacagacaccaggttttgctttggcgttagga
ctgactgtgtttggactgtcttcttttggtcatggtaaagctatggacatccaaccccgt
ctgctggccgcctggaccaagatactgctggcagagggttgtccaacaatgcagaggctg
tccgccctcaatggactgatcgcattagtggggtctgagacggctcttattcagttgaag
agtgaaacagaggagtcctcacaacagcagggcagactgaacgaggtcatccgagccatt
acacagatcatcaccttctcaggaaccataggcctgcagtctaatggagcatgtctgctg
ggacacctgcatctggcccacatgtgcagcagccacagtcgaaccgcagttcctcaggac
ttcagttatctcccagagagaagtgtgatccgagcgagtgtagacttcatcactgaagca
ggaaggaaagggcctgagttcactgctccaatccttgtgaagacggtgctggcaacatta
ggcgcagttggtggaagcttccagtatcctccagtcaactggagcgccgtcctctctccg
ctgatgagactcggcttcggtgaggaggtgcagcatcactgtttagagttggctgtcagt
caggcccagtcctcccagagtgcctcacttttcctcagcatctggcttgtgcctcccctg
gtgcacagcctgagtctccgcactagggcttatctgtacgagtgcctgagctcctggatg
aagcatgtggctgaagacaagctgcaggtgtacgtggatagtctggcagtccagcagttt
gagcccgacacacgtgctcagcgcctgccactatgcctgtccatcctgcgtggcctgtcc
aaagccatggcggtccccaaccctccccaaaactgctggactgccctgtgctctgccacg
gaaaagatctataacctcttacctgataatataccggctgctgaggtggacctctatgaa
gcgacgtgttcatgtctgtctgaactgagcgaccctgagatagaccgcataatcaaagtc
aatgaggctaatgttgaaaaaacagctttcatcctaacctacctgacatctaaaggcaga
gtccctctcctcggactcaatgatgtcatcagtaccatcctccaggttgggaatataaaa
cgaataagctggcttcttctgcagggcctccaccaatcacggttcgcctctagtcccaat
acaggggtctctaaacgaatagagtggctgctggagttaatgggccacataagaaacgtt
gcatatggatctccctccgctaaatgtgtcaacgttatagagggcacagacttcctccta
ggtgtgtttgctgcagcagtggcatcttgggctgaccattgtaccccgcttctcattggc
atcaggacccagtggtttccgtggcaacagtcctctcagataacagaactgactcatgct
ctctatgtcagccctgctaccactgagctgtcggtcgcgtcatgccaatctgcgatccca
tatagcataaagcagctactcgccaaagagccgtggaagtcccagtcacagaagttcatt
gactggctcttcagtattactgaaggtcctaaactaagtttctcagagactgctgtactt
acagccagagcggcattaatggctctgagatccacctcggagttcaagaagaagggcgtg
tggaccagagcgtatggctggtga
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