Chanodichthys erythropterus (predatory carp): 137030048
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Entry
137030048 CDS
T10334
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137030048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cery04990
]
137030048
Domain-containing proteins not elsewhere classified [BR:
cery04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
137030048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
PDZ_2
Motif
Other DBs
NCBI-GeneID:
137030048
NCBI-ProteinID:
XP_067256113
LinkDB
All DBs
Position
11:52375133..52398852
Genome browser
AA seq
1574 aa
AA seq
DB search
MGTGEFVCVTLRGGAPWGFRLRQSAHDPQHPLQVHEIEDGSPAALAGLCENDELVSLNGK
PCSNLSLSEAIDFTEASADCLQLLVKRCCSQPQESFEVVSTTFQIPSPSRLHGPQELYVS
ESQDEAYYGETDSDGECPVGTRLVRTQVQIPASRNKGRGTCAQGGGDTSLDVTPGSVVEL
QLSLSKTTLEEPDCTALGSACGLVGHIHHGKTDESINYTTTAFSSDRPIYIPRRDRQPLG
QWGVLVSKPRQVEVTVHQLSGSSSGKEGVEASERLDSGGEEGGHIEEAPTSSSVSFGLPS
EEWDSESEKEVNQPNKHRARHARLRRSESLSEKQVKEAKSKCKRIALLLSAPAPNPNNKG
VLMFKKHRQRAKKYTLVSYGTGEDEPDYKDDEDDKEEHAVEFTVLATSETEIDEDFFTNA
SVQKSIVSFDWDTGLLEIERKLDNKQDMEALPETKGKGALMFAQRRQRMDEIVAEHEEMR
RKGIPVEAIQDPETHQTYQNMEEITYMHAQETQNYMDVNLHSISAQKQQQQQHHQYQDQY
YQQQQQQQQQYQDYQQQLQYQQQQQPYQQQQDYQQQKMYQNIQTYNPQQHFQQQQVQQYS
HHMNGMFDQQVQNEIQPSVTNRSAKPFSIQNRVAAPFSSALSADNQEQSGYSLGQGEQIA
SRDERISVPAIKTGILQDTKRRSASKPMFTFKESPKVSPNPALLNLLNRNDKKAGVESCP
EEDYLSLGAEACNFLQSPKMKHKIPPPVAPKPHINPASPPWSIQEETTDQPIPQQTANSV
PKPAEAPVTKVEAAPAPATGAPTMSEVGPSVAPESQNVQHSPEHLAPSNAWKHPDPQMEL
NQQPETWNEKQPQLQMNSAHPVAPPVTQSDPSARSWDPAPTQGHQQLPVSTWGPNEVQLQ
VPSQNQSQTQPQWMTQSQGPLEVQLQVPSKTQSQPSWVTQSQTSPPTKHQPQPQSQINSW
VPSPNQSTPQAPWSQPHEPAQPPINVWHQDQNQAQEQPPWTQQQQFQESQLVPHWASPPQ
QQPQPSWSQPQRQSQPQPPWVSQAKQQEPTQPSANVWTQPQSPVQAQPPWAQQTQPPPQP
TAPVQQPMNPWPPMPAQSQPHPQWGQEPASQQHPQQVMNTWTPEQNQIQPPWAQPLPPTQ
PQAHPPWVPKPQQQVSPPPVSQWVPPQSQSQPAVNAWAPQHQEGSVGNTAQTATQKLPPQ
PIKPWSPSQTTQPTPPRRMNSYTTGTKVPSPVPTSSTMSPSGYGSAFEMPALRGKGAELF
AKRQSRMEKYIVDSTTVQSNKARPSSPTPSLPNSWKYSPNCRAPPPLAYNPIHSPSYPPG
AIKQPPPSSPSTTNKNKSKEKGKPAPKPLHVLDVMKHQPYQLKSSLFTYGPAAEKLAAEK
EAAEKLAAQKAAEAQAQAQAQIQAQALGAPNQNQQMTYNQGPPPYGFMPQQAQQPYGMAG
QSPMHEGLYHQVPPDTYQPVLNAYQQHPHQVPFQQEYNPQQTYQQPPLNPYQQAPSPPYQ
QPSPPSYQAGPNPVYQAGPALTYQPPPSSYVVPSFPVAARADSASGGSIIAAPKPKFSAK
KSAAQVWKPSTAEK
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggagtttgtgtgtgtgacgctgcgtggcggcgcgccgtggggattcaga
ctccgccagagcgctcatgaccctcaacatcctctccaggtgcatgagatagaggatggt
agtcccgctgccctagctggattgtgtgagaatgatgaactggtgtcattgaatggaaag
ccttgctctaacctcagtctttcagaagctattgatttcactgaggcctctgctgactgt
ctacagctgcttgtcaaaagatgctgtagtcaacctcaagagagctttgaagtggttagt
accacttttcagatcccttctccatccaggcttcatggcccccaggaactatacgtctct
gagtcccaggatgaagcatattatggggaaacagacagcgatggagagtgtcctgtgggg
acacgattggtccggacgcaagttcaaatacctgcttctaggaataaaggtagaggcacc
tgtgcccagggtggtggagacaccagtttggatgtaaccccaggatctgtggtcgaattg
cagctctcgctctccaagaccaccctggaagagccagattgtactgcattaggcagtgct
tgtggacttgtgggacacatccatcatggaaagacggatgagagcatcaactataccacc
accgcattttcttcagatagacctatatatataccccgacgagaccggcaaccccttggt
cagtggggtgtgttggttagcaaaccaagacaggtggaggtgacagtgcaccagttatct
ggaagcagttctggaaaggagggggttgaggccagtgaacggttggattctggtggggaa
gaaggagggcacattgaagaagctcccacctcctcttctgtgtcctttggacttccctca
gaggagtgggactctgaatcggagaaggaggtcaatcagcccaacaagcaccgggcaagg
cacgccaggctccggcgaagtgagagcctttcagagaagcaggtgaaagaggccaagtcc
aaatgcaagcgcattgctctcctgctgtctgcccctgcccccaaccctaataacaagggg
gtgttgatgtttaagaagcatagacagagggccaagaagtatacactcgtaagctacggt
actggtgaggacgagccagattataaggacgacgaagacgacaaggaggagcacgctgtt
gagttcactgttctagccacaagtgaaacagaaattgatgaagatttctttaccaatgcc
tcagttcagaaaagcattgtgagctttgattgggataccggattacttgagatagagcgc
aagcttgacaacaagcaggatatggaagcactacctgagaccaaggggaaaggagccctc
atgtttgcccagcgcagacagcgcatggatgagatagtagctgaacatgaagagatgaga
cgtaaggggatccctgttgaagcgatccaggaccctgagacacatcaaacataccaaaac
atggaggaaatcacttatatgcatgcgcaagaaacacaaaattacatggatgtaaatcta
cacagcatatctgcacaaaaacaacaacagcaacaacatcatcagtaccaagatcagtac
tatcaacaacagcagcagcagcagcagcagtatcaagactaccagcagcagctacaatac
cagcaacagcaacaaccgtaccaacaacagcaagactaccagcaacaaaaaatgtatcaa
aacatccaaacatataatccgcaacaacacttccaacagcagcaagtgcaacagtattca
catcatatgaatggcatgttcgatcagcaagtgcagaacgaaatacagccatcagtcaca
aacagaagtgccaaaccattttcaattcaaaatagagtggccgctccattttcctctgcc
ttaagtgcagataatcaagaacaatctgggtattcattgggacaaggtgaacagattgct
tcccgtgatgagcgtatatctgtgcctgctatcaagactggtatcttgcaagatacaaag
aggaggagtgccagtaaacctatgttcactttcaaagagtctccaaaggtttcacctaat
cctgctctgttgaatctcctcaacaggaatgacaagaaggcaggtgttgagtcttgccca
gaagaagattatttaagcttaggagctgaagcctgcaactttcttcagtctcctaagatg
aaacacaaaattccaccaccagtagctcctaaacctcacattaaccccgcttctccccca
tggtcaattcaagaggaaactactgaccaacccataccacagcaaaccgcaaacagtgtc
ccaaaacctgctgaagctccagtcaccaaggttgaagctgctcctgcccctgccacaggg
gccccaaccatgtctgaagtaggaccttcagtggcccctgaatcccaaaatgttcaacat
tctcctgaacatcttgctccaagtaatgcatggaaacatccagatcctcagatggaactg
aaccagcaaccagaaacctggaatgagaaacaaccccagctccaaatgaattctgctcat
cctgttgcaccacctgttacgcagtcagatccatctgccagatcatgggatccagctcca
actcaaggtcatcagcagcttcctgtaagtacttggggtccaaatgaggtccaattgcaa
gtcccatctcaaaaccagtctcaaacacagccacaatggatgacacagtctcagggtcct
ttagaagtacaattgcaagtgccttctaaaacacagtcccagccttcttgggtaacacag
tctcaaacttcacccccaaccaagcatcaaccacagcctcagtcccaaatcaattcttgg
gtaccaagtccaaatcagtcaacaccacaagccccatggtctcagccccatgagccagca
caaccacctattaatgtttggcatcaagatcaaaatcaagctcaggaacagccaccctgg
acccaacaacaacagttccaagaatcccagttagtgccacattgggcatcaccccctcag
caacagccacaaccttcttggtctcaacctcaaaggcagtcacagccccaaccaccttgg
gtctctcaggccaaacagcaagagccaacacagccatctgcaaatgtgtggactcaacca
cagagtccagttcaagctcagcctccatgggctcaacagactcaaccaccacctcagccc
acagcaccagtgcagcaacccatgaatccttggccaccaatgccagcccagtcccaacca
catccacagtggggacaagaacctgcttctcaacaacatcctcaacaagtaatgaacact
tggacacctgaacagaatcaaattcagcctccctgggctcagccattgccaccaactcag
cctcaggcgcatcctccatgggtaccgaaaccccaacagcaggtatcaccaccacctgtg
agccaatgggtaccaccacaatctcagtctcaaccagctgtaaatgcttgggcaccccaa
caccaggaaggttcagttggaaacacagcccaaactgcaacccagaagttgcctccccaa
ccaatcaagccatggagtccatcacagaccacacagcccactcctccacgacgaatgaac
tcatataccactgggacaaaggtaccgtcccctgttccaacaagtagtactatgtcacca
tctggttatggatcagctttcgagatgccagccttgagagggaaaggagctgaacttttc
gccaagaggcaatccagaatggagaagtacattgtggattctaccacagtgcagtcaaat
aaggcaagaccatcttcacctactccttctttgccaaattcctggaaatattcacccaat
tgccgggctcccccgcctttggcatataatccaattcattcaccgtcatatccaccaggt
gctatcaagcagcctcccccctctagcccttcaacaacaaacaagaacaaaagcaaagag
aagggaaaacctgccccaaaacctcttcatgttcttgatgtcatgaaacatcagccctat
cagctgaaatcctctcttttcacctatggcccagcagcagagaaacttgctgcagaaaag
gaggcagctgaaaagctagctgcccagaaagcagctgaagcccaggctcaggcccaggcc
caaattcaagcccaagcactaggtgctccaaatcaaaaccagcaaatgacatataaccaa
ggtcctcctccttatggttttatgccacaacaggcccagcaaccctatggaatggctggt
cagtcacctatgcatgaaggcctttaccaccaagtccctcctgatacatatcagcctgtc
ctaaatgcttatcaacaacaccctcatcaagtcccatttcagcaagaatacaacccccaa
caaacttaccaacaacctcctttaaatccttaccaacaagcaccaagtcctccctaccaa
cagccctccccaccctcctatcaggcaggtcctaatccagtatatcaagctggacctgca
ctgacctaccaaccaccccctagttcttatgttgtgccatctttcccagtagcagcaagg
gctgactctgcctcaggaggcagtattattgctgctccaaagcccaaattttcagccaag
aagagtgcggcccaggtgtggaagccaagcactgctgaaaaatag
DBGET
integrated database retrieval system
