KEGG   Chanodichthys erythropterus (predatory carp): 137030301
Entry
137030301         CDS       T10334                                 
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery04382  Cornified envelope formation
cery04510  Focal adhesion
cery04512  ECM-receptor interaction
cery04518  Integrin signaling
cery04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cery00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137030301 (col4a6)
   04518 Integrin signaling
    137030301 (col4a6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137030301 (col4a6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137030301 (col4a6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137030301 (col4a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cery04147]
    137030301 (col4a6)
   00536 Glycosaminoglycan binding proteins [BR:cery00536]
    137030301 (col4a6)
Exosome [BR:cery04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137030301 (col4a6)
Glycosaminoglycan binding proteins [BR:cery00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137030301 (col4a6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137030301
NCBI-ProteinID: XP_067256625
LinkDB
Position
11
AA seq 1715 aa
MRLWTFVLPVVLYAVSAQGGSKLQEPCAGRDCRGPCPCLPLKGSRGRPGELGQVGSNGPE
GFMGGPGPVGPKGEKGHVGRKGPSGLNGDKGPMGVPGFSGNDGVPGHPGQEGPRGPPGLD
GCNGTQGDPGARAVDGFPGIPGAPGYPGQKGQKGEPYYRLPPFLTDGPPGPAGFPGPLGP
QGPDGFPGLPGPPGPPGPPGSPGQGYKGEPGEKGDVGLPGLRGNPAVQFNAPAISTINKG
EKGEVGQPGDPGLPRGNGVVEFVGFPKGDKGTKGEKGYAGNPGLPGRPGPTGPFGYKGET
GEKGILGLPGLRGPPGLNGPPGLPGRKGFTGNPGFPGQSGFTGPKGDRGDPGPPGPILEP
TNGIKGPQGDPGFPGYPGQTGDTGFPGFPGPPGPPGPPGIPTFISGRPGISGFPGSRGPK
GQRGNPGRDSYGPEGLPGSQGLSGPPGPPGPPGSTLNAFSNALPGFRGQPGPRGSPGDRG
YKGFKGENGDCNCLGGGTTGAQGLQGPPGIPGFRGSNGVKGEIGDQGFPGLRGPQGFDGR
AGERGFYGRKGEKGNSFIPQGKGQKGDLGQQGLAGPLGASGNPGRDGSPGFPGQPGPPGD
PGFGVTGDKGFPGIPGFKGRPGASGDPGFGYPGVPGFKGSQGDPGFNGLPGTPGLKGSAG
DSCGQAGLNDASLEEGGTPVPCRIFGEQGYPGFPGRPGVPGPKGRPGSQGVNGRPGFDGP
KGEIGEPGSGGQPGPQGFPGPRGDPGLPGTTNAGSPGFPGRDGFPGVPGAKGEPGVVLGA
TPGGPGSPGRPGEPGDKGQPGTPGLPGRPGNDGRNGFPGVKGERGVDGKPGLVGPIGPPG
EIPSGGIPGPRGPAGAKGFQGHQGCQGSPGLKGMRGDLGPPGPGGIKGIPGLPGVPGPQG
YRGPPGPPGIAARPGTPGRPGIKGVKGSSGLLGFPGSLGFPGIPGDPGVKGLPGFTGLDG
LPGEVGSKGLKGDRGTPGLPGPSFPEFQIELAKGDTGYRGADGLPGFTGPRGDKGFPGRP
GREGFPGSPGVAGQVKGLPGQPGIPGFPGPSGFPGSKGFPGVMGFPGSAGLRGDDGVPGL
QGFPGTQGQSGVKGEKGDSYELSGPPGPKGALGNPGFRGGPGLPGEPGDSGFPGALGFQG
QKGFLGEPGAPGFSGSPGLPGIRGLPGYPGLKGRDGDPGRPGASGSPGEKGFPGSPGLDG
LNGLPGSKGQPGVPGVIEDARPGAPGVNGRKGERGSSQPGGPGRPGEKGFKGDTGAPGSR
GYPGNPGPPGPPSPSNIPGPPGDPGLPGLDGREGPVGPPGLRGPPGPGTVQGDRGDPGFP
GLQGIPGARGDPGAFGASGFQGNPGLKGQRGDPGFSGVRGPPGFPGEPGYYGRNGLKGLK
GFPGPKGLPGVLYPNNITGNMENGDPGQPGDDGLVGQTGMPGLPGSPGVPGPKGFRGPVG
RLGPVGPAGSPGSFGDTGPPGIQGPTGNQGPRGNPGLPGLPAPPVRSSGIGYTLVKHSQS
SQMPMCPQGMSKLWEGYSLLYVEGQEKAHNQDLGLPGSCLPHFSTIPFLYCTVNEICHYA
SRNDKSYWLSTTAPIPMMPVADQQISEYISRCSVCEAPSQAIAVHSQDLSIPTCPQGWRS
LWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTT
VEQDEQFVQGPSQETLKGDQYRSRISRCQVCMKIL
NT seq 5148 nt   +upstreamnt  +downstreamnt
atgagactttggacttttgtgttacctgttgtcttgtatgcagtatctgctcaagggggg
tcaaagctgcaggagccatgtgcgggccgggactgtagaggaccgtgtccgtgtttgccc
ttaaagggtagcagggggcggccgggggaacttggacaagtgggcagcaatggtcctgag
ggtttcatggggggcccaggaccagttgggcccaaaggagaaaagggccatgtaggacgc
aaagggccctctggactaaatggagataagggcccaatgggtgttcctgggttttctgga
aacgatggtgttcctggacaccctggtcaggaggggcccaggggacccccaggtctcgat
ggctgtaatggcacacaaggtgacccaggtgccagagctgttgatggatttcctggtatt
cctggtgctcctggataccctggtcagaaaggtcaaaaaggagagccgtattataggtta
ccaccatttttgactgatggccctccaggtccagcaggatttccaggtccattggggccc
caaggtccagatggatttcctggtctacctggtccacctggtcctcctggacctccagga
agtccaggtcaaggatacaaaggggagccaggcgaaaagggggatgttggtctaccggga
ctcaggggcaatccggccgttcagtttaacgcaccagcaataagcactatcaacaaagga
gagaagggagaagtgggccagcccggtgacccaggcctccctcggggcaatggagtggtg
gagtttgttggctttccaaaaggagacaaaggaactaagggtgaaaaaggctatgccggt
aatccaggtcttcccgggagaccaggaccaacaggcccatttggttataaaggtgagact
ggagaaaagggaatcctgggcttgccaggcttgaggggtccacctggtctaaatggtcct
cctgggctcccagggagaaaaggcttcactgggaatccaggttttccaggccaatcaggt
tttactggcccaaaaggtgacagaggagacccaggtccacctggaccgattttagaacca
acaaatggaattaaaggtcctcaaggtgatcctggctttcctggttatccggggcaaact
ggggatacaggttttccagggtttcctggtccgcctggtcctcctggtcctcctggaata
cctacttttatctcaggtcgccctggcatttctgggttccctgggagtcgtggacccaaa
ggacagaggggaaacccaggtcgggattcttatggtcctgaaggtcttcccggaagtcag
ggactttcaggacctcctggtccccccggaccaccgggcagtacattaaacgcattctca
aatgcactacctggtttccggggtcagcctggtccaagaggatctcccggagacagaggc
tataaagggtttaaaggagaaaatggtgattgcaactgtttgggtggaggaacgacgggt
gcacaaggacttcaagggcctccagggatcccaggtttccgaggatctaatggtgtgaag
ggagaaattggtgaccaaggcttcccaggacttcgtggaccacagggctttgatggtcga
gcgggtgagagaggcttttatgggcgtaaaggagagaaaggtaattctttcatccctcaa
ggaaaaggacaaaaaggtgatttgggtcagcagggtcttgctgggccacttggagcaagc
ggcaaccctggaagggatggatctcctggcttccctggacaaccaggtccacctggggac
cctggttttggggttactggagataaaggttttcctgggatcccagggttcaaaggtcgt
cccggtgccagtggcgatcctggttttggctatcccggtgtacctgggttcaaagggtca
caaggtgatcctggattcaatggtcttcctggaacacctggacttaaaggttctgcaggt
gacagctgtgggcaggcggggcttaatgatgcctctttggaagagggaggaacaccagtg
ccctgtagaatttttggtgaacaaggatatccaggattccctggacgccctggggtgcca
gggccaaagggtaggcctggttcccaaggagtaaacggtcgaccagggtttgatgggcca
aaaggtgagataggagaaccaggctctggaggacagccaggacctcagggtttccccgga
cccagaggagatccaggtttaccaggaacaactaatgctggttcaccagggtttccagga
agagatggttttccaggtgtgcctggagctaaaggagaacccggtgtggtgcttggagcc
acccctggaggtccaggttctccagggagaccaggagagccaggagacaagggtcaacct
gggacacctggtttacctggaaggcctggtaatgatggacgcaatggttttcctggcgta
aagggtgagcgaggtgtggatggaaaacctggtctcgtaggtcccataggtccaccagga
gaaatcccttccgggggtatacctggtcccagagggccagctggagctaaaggatttcaa
ggacatcaaggctgccaaggttcccctggacttaagggtatgagaggagatctggggcct
ccagggcctggtggaataaaaggtataccaggacttcctggcgtcccagggccacaggga
tataggggacctcctggaccccctggaattgcagcacgtccaggcacaccaggaagacca
ggaataaagggggtgaaggggtcttctgggcttttggggtttccaggatcacttggtttt
cctggaatcccaggtgacccaggagttaaaggtttacctggtttcactgggctggatggc
ttaccaggggaagttggatcaaaaggactcaaaggggatcgtggtactccgggtcttcct
ggaccctcttttccagagtttcaaatagagctggcaaagggtgatacaggttacagagga
gctgatggactgcctggtttcacaggaccaagaggtgataagggttttccagggcgacct
ggacgtgaaggttttcctggatcacctggcgttgcaggccaagtaaaaggtttacctggc
cagcctggaatcccaggttttcctggcccctctggcttccccgggtctaaaggttttcct
ggagtaatgggcttccctggctcagcaggccttaggggtgatgatggtgtgcctgggctt
caagggttcccgggcactcaaggacaatctggtgtcaaaggtgagaaaggtgactcatac
gaattatctggaccccctggaccaaagggtgcactcggaaatcctggattccgaggtggt
ccaggacttcctggtgaaccaggtgattcaggtttcccaggagcgttaggatttcaaggc
cagaaaggttttcttggtgagccaggagcaccaggattttctggctcaccaggccttcca
ggcatcaggggccttcctggatatccaggactaaaggggcgtgatggagatccaggccgt
cctggagcttcaggttcaccaggagagaaaggttttccagggtcacctggtttagatgga
cttaatggtcttccaggatccaaggggcagcctggagttccaggtgtgattgaagatgct
cggcctggagctcctggtgtgaatggtcggaagggagagagaggctcatcacaacccggt
ggacctggccgccctggagagaaaggattcaaaggagacactggtgctcctggttctaga
ggctaccctggtaatccaggcccccctgggccacctagtccttctaatatcccaggtcct
cctggagaccctggacttccaggattagatggacgagaaggtcccgttggccctcctggt
ctccgtggtccaccaggccctggaacagtccaaggagacagaggagatcctggatttcca
gggctacaaggaataccaggagcacgtggagaccccggtgcttttggagcctctggattt
caaggcaaccctggtttaaaagggcaaagaggtgaccctggctttagtggtgtacgtgga
ccaccagggttccctggagagccaggatattatggcaggaatggacttaaaggattaaag
ggttttcctggtcctaagggacttccaggtgttttgtaccctaataatataactggcaat
atggaaaatggggatccgggccaaccaggtgatgatggattagttggccagacaggaatg
ccaggcttgccaggcagtccaggagtcccaggtcccaaaggatttagagggccagtgggt
agactcggtccagttggtccagctggatctccgggatcttttggtgacactggacctcca
ggaatccaaggacccacaggaaaccaaggaccccgtggcaatccagggttgccaggtctt
cctgctccaccggtgcgcagtagtggtattggttatactttggtgaaacacagtcagtcc
agccagatgcccatgtgtcctcaaggcatgtccaagctatgggagggatacagtttgctg
tatgtggaggggcaggagaaagcgcacaaccaggacctgggattgcctggctcatgtctg
ccacatttcagcactatccccttcctgtactgcacagtcaatgaaatctgccactacgct
agccggaatgacaaatcctattggctgtccaccactgcacccattcccatgatgcctgtg
gcagatcagcagatatctgagtacattagccgttgctcagtgtgtgaggctccttctcaa
gcaatcgctgtccatagccaagatctcagcattccgacctgccctcagggctggagaagt
ctatggattggatactccttccttatgcacacagctgcaggtgcagaaggaggcggtcag
tcattggtgtctcccggttcttgtctcgaagatttccgcgccactcccttcatcgagtgc
aatggtgcccgcggcacctgccactactttgccaacaagtacagtttctggttgaccaca
gtcgagcaggacgaacagttcgtccagggtcctagccaggagacgctgaagggagatcag
taccggtcacgcatcagtcgctgtcaagtctgcatgaagatcttgtag

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