Chanodichthys erythropterus (predatory carp): 137030408
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Entry
137030408 CDS
T10334
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137030408 (lingo1b)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
137030408 (lingo1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
Ig_VEGFR-1-like_5th
LRR_RPS2
LRR_Zer-1
V-set
Motif
Other DBs
NCBI-GeneID:
137030408
NCBI-ProteinID:
XP_067256806
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Position
11:complement(20192851..20196433)
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AA seq
621 aa
AA seq
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MTSLVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCHR
RKLMALPEGIPIDTRLLDLSKNRLKAINPEEFLNYPHLEELQLNENTISVIEPGAFSNLL
GLRTLGLRNNKLKLIQLGVFTGLSNLTQLDISENKIVILLDNVFQDLYNLKELEVGDNDL
VFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLMTLRLRHLNINTIRDFSFRRLY
RLKVLEIANWPLLETLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPI
EVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNKLSTLEESAFHSVG
NLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCETPEFLQGKEFKDFPDVLPTNYF
TCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPVPMIIWQSPKKQFITTKSIGRLSVSPD
GTLEVRYAQIQDNGTYMCIAINAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPNDN
SANGTGATDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYVP
RKVDGENSPTEGSHKISMKMI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacctcactcgttaccatcaaaatggtggccagagaggcaagtgggcacagctacctg
gtggcatgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctctgcc
actggctgcccctctcgctgtgagtgcagtgcccaagagcgctcggtcgtgtgtcatcgc
cggaagctgatggccctccccgagggaattcccattgacacaaggctgttagatctcagc
aagaaccgtttgaaagccatcaatcctgaggaatttctcaattacccacacctagaggag
ctacagcttaatgagaacaccatttccgtcattgaaccaggggccttcagcaacctcctt
ggcttgcgaacactgggactacgcaacaacaagctgaagttgattcagctgggtgttttc
actggcctcagtaacctcactcagttagatattagtgagaataaaattgtcattttgttg
gacaacgtgtttcaagacctctacaacctgaaagagctggaggtgggggacaacgacctg
gtgttcatctctcaccgagcttttcatggcctcagcagcctagagcagctcactatggaa
agatgcaacctgacctctgtgccaacagaagccttcagtcatctgcacaacctgatgacc
ctcaggctgcggcatctgaacatcaacaccattcgagacttttccttcaggaggctttat
cgactcaaagtcttagagatagcaaactggcctcttttagaaaccttgaccgcgaagtcc
ctccatggactgaacatcacaaccttgagcatcacaaactgcaatctcactgccgtccct
tacgtggccattcagcacctggtgtaccttcgatttttcaacctgtccttcaatccgatt
gaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcttttcacttggtt
gggggccggctagtcagcatcgagccttattccttcagaggactcaactaccttcgtgtt
ctcaatgtatccagcaataaattaagcactttagaagagtctgcctttcactcggtcggc
aatctggagacactggctcttcatgacaaccccttagcatgcgactgtcgtctcctctgg
gtctttcgccgtcgatggagacttaatttcaaccgccagcagccatcttgtgaaacacca
gagtttttgcagggtaaagagttcaaagacttcccggatgttctcccgacaaattatttc
acttgtcagaaatctaagatccgagatcacaaagccattcatagatttgtggatgagggg
accactgtccaattcccttgccaagcagatggagaccccgttcccatgattatatggcag
tctccaaaaaagcaattcatcacaactaaaagcattggccggctgtcggtgtctcctgat
ggcaccctagaggttagatatgcccaaattcaagacaatggcacatacatgtgcattgcc
atcaatgcaggaggtaacgacacccgtttggctcacctacatgttcatagctactctccc
aattggccccatcagcctaataagacctttgccttcatttcaaaccagcccaatgataac
agtgccaatggaactggtgcgacggatccctttccctttgatatgaagactctcataatc
gctaccaccatggggtttatctctttcttgggagtggtgttgttctgtctggtgctcttg
ttcctctggagtcgagggaaaggcaatgccaagccaaacattgagattgagtatgtgcca
cggaaagtagatggagaaaacagcccgactgagggatctcacaagatcagtatgaagatg
atttaa
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