Chanodichthys erythropterus (predatory carp): 137030425
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Entry
137030425 CDS
T10334
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137030425 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137030425 (dis3l)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137030425 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
137030425
NCBI-ProteinID:
XP_067256826
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All DBs
Position
11:31293828..31306116
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AA seq
1062 aa
AA seq
DB search
MDDSVIIKTEKVLHLNSSKGRKVRVVREHYVRQQVPCGNSFCQANCHNVGKVLSSDVTHY
VVPDVGVVRDFLEILEFRELQGIVLTQTAYQTVQHTRGRRHYNRLRALLKDPRHDCVLFA
NEFQQYSYCPRDKGEPQDKWNTRKVYNAAVWYYNHLAGLRPVVMITEDADTISEYSALNS
GVYVISTQEYLLSFWPELQAARDLYSSIAQTLQERESEGAEKVYAEHLPAEVLEAGIKSG
RYIQGILSVNKHRAQNEAFVRYEGSASKNTELNSDVLISGVKHRNRAVHGDMVVIELLPR
NEWKGRTIALTEGQGEERVQEEIQSQPLPTGRVVGILQRNWRDYVVTFPPLEEVQSQSRN
SQKILVIPWDYRIPKIRISTQQAEALQDQRVIVRLDSWESTSVYPNGHCVKVLGKAGELE
TEIQTILVENCIHVPPFSEAQLREMPVNTEENPWKMDSREVSSRRDLRETHLVFSIDPKG
CEDVDDTLSVRILPGGKRLELGVHIADVTHFVREGSLTDLEARSRATTYYLADRRYDMLP
AVLSADLCSLLGGVDRYAMSVLWELDAESLDVCTVWYGRTLIRSSYQLHYELAQSLLNGE
EVEVPELGQLKGSQRDQKLAELMQALETLTRVARHLRAQRDKGGALELEGVEVTAQLDEE
KNITALVPKQPLEVHETVAECMIHANHWVARKIQESFPHQALLRHHPPPKQEFFNQLIDS
AKARGFSIDTRSNRALADSLERAVDPQDPLVNRMLRMMATQAMSNALYFSTGACPEEQYY
HYGLALDRYTHFTSPIRRYADVLVHRLLMAAVQLEKEGSLSKALDSNKELEELAQHINNK
NRAAQHAQKQSTELFQCLYFRDKDSNTDERCVADAVIYAVRANGFLAFVPQYGVKGAVYL
KDREGQVVSVDGDGRCEWKAGILQRYPDRINTCTSTGTHTFHLFDHVTVRISVEPSRCHA
DSLCLQLISNKPHCAVKPESQPAGRGRSELVQEVVRWAEEASLQAEEEKGRKPKLSREER
KFKQSRTPNLYVLLQEISELALLDLSLCQLRNTEEQTCTASA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcggtcatcatcaaaaccgagaaagttttacatttgaacagctctaaggga
agaaaggtccgtgtggttcgggagcattatgtgaggcagcaggtgccgtgtggaaactcg
ttctgtcaagcgaactgtcacaacgttgggaaggtgctgtctagtgatgtaacccactat
gtggttccggatgtgggagtagttcgggatttcctggagattctggagttcagggagctg
cagggtatcgttttgacccagacagcctaccagactgtacagcacactcgtggacgcagg
cactataacagactgcgtgctttactgaaggaccctcgccacgattgtgtgctgtttgca
aatgagtttcagcaatattcctactgtcccagagacaagggtgaacctcaagacaaatgg
aatacaagaaaagtgtacaatgcagcagtttggtactataatcatctggctggactccgg
ccagtggtcatgattacagaagatgctgacactatttcagaatatagtgccttaaacagc
ggagtgtatgtcatctcgactcaggagtacctgttaagtttctggccggagctgcaggct
gcccgtgatctgtacagctccattgctcagacccttcaagagcgagagagtgagggagca
gagaaggtgtacgctgaacacctgcctgcagaggtgcttgaggctggtataaaatctggc
aggtacatccagggcatcctcagtgtgaacaaacatcgagcacagaatgaagcgtttgtt
cgttatgagggttcagccagcaaaaatacagagctaaacagcgatgtgctgatcagtgga
gtgaagcaccgtaaccgagcggtgcatggagatatggttgtcatagagcttttgccccgt
aatgagtggaagggcaggactattgcgctaacagaaggtcagggggaggagcgggtacag
gaggaaatccagagtcagcctttgcccacaggcagggtggtgggtattctgcagaggaac
tggagagactacgttgtgacatttcctcctcttgaggaggtgcagtcccagagccgaaat
tcacagaagattctggttattccatgggactaccgcatacctaaaatccgtatcagcaca
cagcaggctgaggcactgcaggaccaaagagtaattgtgcgtctggattcgtgggagagt
acttctgtctacccaaatggccattgtgtgaaggttctgggaaaagcaggtgagctggag
actgagattcagaccatcctggtggagaactgcatccatgttccaccattctccgaggca
cagttgcgagagatgccagttaacacagaggagaacccatggaagatggacagcagagag
gtgtcttctcgacgggacctgagagagactcatctagtgttcagtattgatcctaagggc
tgtgaggacgtggatgacaccttgtctgtacggattttgcctggggggaaacggttagag
ctgggtgtccacattgctgatgtcactcactttgtcagggaaggctctcttacagaccta
gaggcacggtccagggcaaccacttactaccttgctgaccggagatatgacatgctgcca
gcagtgttgagtgccgacctgtgctccctccttggaggagtggaccgatatgccatgagt
gtgctgtgggagctggatgccgagtctctggatgtgtgtacagtttggtacggtcgcact
cttatccgctcctcctatcagcttcactatgagctggcccagagcctgctgaatggcgag
gaggtcgaggtgcctgagctaggccagctcaagggttcacagcgggaccaaaaactagct
gagctcatgcaggccctggagactctgacgagggtagccaggcacctccgggcacagaga
gataagggtggtgctctggagttggaaggggtggaggttacggctcagctggatgaggag
aagaacattacagcccttgtgcctaaacagcctttggaggttcatgagactgtagcagag
tgcatgatccatgccaaccactgggtggcacgcaagatacaggagagctttccacatcaa
gctcttctgcgtcatcacccaccacccaaacaggagttcttcaatcagctaatcgacagt
gccaaggcccgtggcttcagtattgatacaaggtcaaacagggctctggctgattctctg
gagcgagctgtggatcctcaggaccccctggtgaacaggatgttgagaatgatggccaca
caggccatgtctaatgctctttacttctctacaggagcctgtccagaggaacagtactat
cactatggtcttgcactggatcgatacactcactttacctctccaatcagacgctacgct
gatgtattagttcaccggctgctcatggctgccgttcagctggagaaggaaggatcacta
agcaaagctttggacagtaacaaagaacttgaggagctggctcaacatatcaacaataaa
aacagagcagcgcagcatgcgcagaagcagtccacggagctcttccagtgcctctacttc
agagacaaagactccaacacagatgagcgctgtgtggctgatgctgtgatctatgctgtc
cgagctaatggttttcttgccttcgtaccacagtatggtgtgaagggagctgtgtacctt
aaggatcgagagggtcaggtggtcagtgttgatggagatggaagatgcgagtggaaggct
gggatattgcagagataccctgacaggatcaacacctgcactagcactggaactcatacc
tttcacctcttcgaccatgttacagtccgtatctctgtagaaccgtctcgttgccatgcc
gacagcttgtgtctgcagcttatcagcaacaagccccattgcgctgtgaaacccgaatcc
cagccagctggtcgtggtcgatccgaactggttcaggaagttgtgcgctgggcagaagag
gcctctctccaggcagaggaagagaaggggaggaagcccaaactgagcagggaggagagg
aagttcaaacagagcagaacaccaaacctctatgtcctgttacaggagatcagtgaactt
gccctgctggatctgtctttatgccaactcagaaatacagaggaacagacttgtactgca
tctgcttag
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