Chanodichthys erythropterus (predatory carp): 137030678
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Entry
137030678 CDS
T10334
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137030678 (trim71)
04121 Ubiquitin system [BR:
cery04121
]
137030678 (trim71)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137030678 (trim71)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137030678 (trim71)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137030678 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_2
Ig_GEX2_N
Invasin_D3
zf_RING_Vps8_fungal
BBP1_C
DUF4094
Motif
Other DBs
NCBI-GeneID:
137030678
NCBI-ProteinID:
XP_067257218
LinkDB
All DBs
Position
2:11863261..11898128
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AA seq
824 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSSTSSTRR
LHVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDSLPSSNFLFSNLLDVV
VSAEEQGKNGRSSSVVHHGGLLRPQQLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLLESFHLANRTNNSNTPVNISQSFHNSFSMLNVFQERMEFCQQHDNA
VLRFFCDSCAVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAIQLSIE
KAQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HQNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCFLQPQEDDRIMFTPP
DQALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKPASFTVVGYDHDGEPRLSGGDSV
SVVLMSPDGNLSSADVSDHQDGTYTVSYLPKSEGDHLLSVLICNQHIEGSPFKVMVKSGR
SYGGVGLPIATFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDIQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVAVDFGNNRILVF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattctgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcgtcctcccagacctccaactcctcatctacctcatccaccaggaga
ctgcacgtcctgccctgtctgcacgccttctgcaggcagtgcctggagggccaccggagc
cccggtgaccctctgaagctcagatgccccacatgcgaccaaaaagtgtctttgtcggaa
tcaggcgtggactcgctgccctcctccaactttctcttcagcaacctgctggatgtggtg
gtctctgctgaggaacagggcaagaacggtcggtcttcatcggtggtccatcacggtggt
cttttgagaccccagcagctctcagaccctcagtgcagctcgtgtgacgagggcaacccc
gctacctcccactgcctggactgccaggagtacctgtgcgacaactgcgtgcgggcccac
cagagggtccgactcaccaaagaccacttcatcgaggggctgctggagagctttcacctg
gccaaccgcaccaacaactccaacaccccggtcaacatctcccagtccttccataacagc
ttctccatgctgaatgttttccaggagaggatggaattctgccagcaacatgataacgcg
gtgctgcgttttttctgcgacagctgtgctgtgccgatctgtagggagtgcagcttgggc
agacatgcaggtcacagtttcacctacctgcaggaagcactgcaggactccagagcgctg
acaatccagctgctcgcagacgcacagcagggcagacaggctatacagctgagcatcgag
aaagcccaagccattgcagaacaggtggagctgaaggctaaggttgtgcagtcagaagtg
aaaacgatcactctacgtcataagaaagctctggaggaacgagaatgtgagcttctctgg
aaggtggagaagatccgccaggtgaaggcaaaatcactttacctgcaggttgagaaacta
caccagaatctcaccaaactggatagtactatcgccacagtgacgcaggttttagaagaa
ggccgtagcatagacgtcctactagcacgcgagcacatgttaaatcagctacaggagctt
aaatccctccgctgcttcctacagccccaagaagatgatcgcatcatgtttacccctcca
gaccaggctcttctgattgccatcaagtccatgggcctcatcagcagtggagccttcgcc
acagcttccaaagctcacggtgaaggcctcaaaagagcactgcaaggaaagccagcttcc
tttactgttgtagggtatgatcatgatggtgaacctcggttgtccggtggtgacagcgtc
tcagttgtgcttatgagtccggatggtaatctgtccagtgcagatgtttctgatcaccaa
gatggaacgtacacagtcagttatctgcccaagagcgagggtgaccatttgctctcggtg
cttatatgcaatcagcacattgagggaagtcccttcaaagtgatggtcaagtccggtcga
agttacggtggtgttggcttgcccattgcaacctttggaggagagggtgatggggatggg
caactgtgtcggccttggggaatttgcgtggataaggagggctatgtggtggtcgctgac
cgaagcaacaaccgtgtgcagatcttcaagccttgtggcacgttccaccacaagtttggc
actttgggatcacgaccgggccagtttgaccgcccagctggggtcgcctgtgacatccag
agaagaatcattgtggcagataaggacaatcaccgcatccagatcttcacattcgatggc
cagtttcttctgaaatttggcgagaagggaaccaaaaatgggcagttcaactacccatgg
gatgttgccgtcaactctgagggaaagatcctggtttcggatacccgcaaccatcgcgtg
caactctttgggcctgacgggactttccttaacaaatacggattcgaaggtgccctctgg
aaacatttcgactctcctcgcggtgtggccttcaatcaggaaggccacctcgtcgtgacc
gacttcaacaatcatcggctgcttgtcatcaggcccgactgccagtcagctcgcttcctt
gggtcagagggaaccggaaatggccagttcttgcgcccgcaaggtgtagccgtggaccag
gaggatcgtattatcgtggctgactcccgcaaccatcgcattcaggtgtttgaacccaac
ggcaactttttatgcaagtttgggactcaaggaagtggctttggccaaatggatcgcccc
tctggtatagcggttaccccagatggaatgattgtggccgtggactttggaaacaaccga
atcctcgtgttctga
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