Chanodichthys erythropterus (predatory carp): 137030878
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Entry
137030878 CDS
T10334
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04512
ECM-receptor interaction
Brite
Lectins [BR:
cery04091
]
C-Type lectins
Lecticans
137030878 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137030878
NCBI-ProteinID:
XP_067257477
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Position
11:complement(52515158..52566473)
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AA seq
2168 aa
AA seq
DB search
MTAIDRTYLPFLLLGLLHHIQGSLVKTNLGVKVKRGQSVFLQEGDLQFHIPRDKDACKLE
VVLNEPITQRVGTLSPQVFDCHFLADEVKYTHNGCPILKEDTVKLRLYRFTETETFSELF
SLSVEIMEPDCNVIRFGSQNLEVPEFYGLSNILDGNIVSFHYEHRHNIECTVRVTTLETH
LPVHGQLVTGEPEKPEGPRGDEPDSFVPLRRQLDNKARAHCKSDDCLKGLKLLKITKVPC
NDFLMMGIRYQHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEQAWIPVTIKGAMPNQPPKP
AFMSMFILEVDQFILTPLSTATLDAEDEETPKQRLVFNITNPPNEGFITHLSDHTKPISS
FTWMDLNDMLISYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPVMVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQLQIVDNDNLKAVKIITVDGLQHGRLTVRGGKGFMFTVNDIK
DGAVHYHHDDSDTTKDYIVFRITDGLHQTRHKFSINVLPKDDSPPFLITNLVLELSEGQT
GLLRGSILQACDMDSSDDYIMFNITRPPQAGEIMKMPGPGITGYPVTRFLQKDLFHSIIY
YRHSGSEVFDDSFEVVLSDFHDPPNLSEPQVIVIQIQPVPDQPPQEAPGVTRHLVVNETD
VTYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYGGSDAGRLFLVDSIPKFNKDPNAPM
LRLFTQNAVNYMKVAYMPPILDIGPYPQHIQFVLSVTNQQGSMTAGICFNITILPVDNLA
PEVHVRQMTVDEGGESWVSEEHMRLTDQDSLEDSLHVKLMTEPQHGSIYLDGTPMSPGQT
FTVRDLKNLKVRYHHDSSETEHDDIKFIATDGINIADFVLHVKVTLVNDEVPVLVAGLKA
ILACAEGQEVVISVEYICATDPDSDDSTLMYLIAQQPYHGVVQRNGIVVDRFIQADITAG
LISYRHTGQEIGLQPRHDVVTFVISDGESGLLPSCCSDKATLFSAQTPGVQNSLPVYDLN
ITVYPVNNQPPSIAVGEVFKVDEGGSASITVTHLRVEDQDSAPEDLKLILVAPPQFGYIE
NILPSPGFEKSNMGISIACFTYRDVLNGHINYVQSRHQRMEPTTDQLMLHVSDGKQQSSS
VPFYIIIIPTNDEIPEFLARNITVREGDMKELDPSIISAVDLDVPRDHLIFSIVQQPQHG
SIMSVPHGNDVTHYKRGSEIPVEHFTMDDLRSGMTLIYMHDDSESEKDGFIVQLSDGKHQ
LQKHVQVKVLPVNDEEPQIIRNTGIEIEAGESRLISSAVLSAHDKDTSSSNIIYVFESIP
SHGVIQMKVGTDWVSVSAGMNCSQQVLDMNLLRYLHTSHPGAPAADFFVFHLLDGKNRSP
AQHFHITVKELEKGDIALFLKPVRSSRGERVVLTTDVLLAVDGADKPEELLYIITVPPAH
GHVEYIKHTGVQIQSFSQLDVAANLVCYVHDNRATSPKETLRFVVSNGISTRNGTLEILV
ELTDKVLPTLVHNTGLRVPQGSTITLTPDALFLSDPDSPHTALSYKVVHLPQYGQLLLKG
QPLVAGSRFTQQNIQDLAVAYRHSGGASQIDRFRFTASDSTERGFLLDGKVQTEPVFFTL
QIEALDSSAPQIAVLETLWKVELLKDGRYGIFISSRELKAQDTNSANGDLIYHILRSPYF
GYLENCTNGEFVRHRFSQRDLNRRNILYIINSALDALTDSLEFAVSDALGNTGPSHKLEF
SWASVELTRTEYIICESQGSVSLTIQRKGNVQDSSYVTVKVKEITASAGHDFIPASSLIQ
FDPGMVSRVWKVEIVQDRLEEVDEKFEVTLASPVGAVLKDKSKATIFIKDTNGQCRENRI
KAGTSIQGQEVQPGPYPQHGSIQVETLPFSQGYIRGDGDIIVEAPSTTKKRLRVIGNGKV
VQPSETINHGSDVIYRYHGIVSMAVEEDKADSRTDRMAQVQVTSWGQQSSPAVRTKLQQT
ASHANSRVSQPFLTQPSSKPCTPELTGFLHYNDSLGQLFRCNGDSWRPWTPTNETVKAQK
CPRGWTYHNNYCYILSTERKATWSAAVRACRERFNGNLVSVLSKGDMDWLWDFSERKPFW
IGLNDRESKGRWEWVGGEPVTYTNWRQSPPKNRKKGTRKCVLVWRKTKWQIRDCKKGKGH
RYVCYVKM
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatagacaggacatatttgcctttcctcttgctgggacttctccaccatatt
cagggctctctggtaaaaaccaatcttggtgttaaggtgaagagggggcagtcagtcttt
ctgcaggagggggacttgcagtttcatatacccagagacaaggatgcctgcaagctggaa
gttgtgctgaatgagcccattacacagcgggtcggcacattgtccccacaggtttttgac
tgtcactttttggctgatgaagtgaaatacactcataatggatgtccgattttaaaagag
gatactgttaaacttcgtctgtacagatttacagagacagagaccttcagtgagctgttc
tctctcagtgttgaaatcatggagcctgactgtaatgtgattaggttcggatcgcagaat
ctcgaggtgccagagttttatggcctctccaatatcctggatggtaatattgtgtccttc
cactatgaacatcgacataatattgagtgcacagttcgggtgacaactttggagacacat
ctacctgttcatggtcaactagtcactggggaaccagagaaaccagagggaccgagaggg
gatgaaccagatagttttgttcctcttcgaagacagctggataataaagctcgagctcat
tgtaaaagcgatgactgtctgaagggtcttaaactgctcaagatcaccaaagtaccatgc
aatgatttcctcatgatgggcatccgctaccaacacattgaccctccatctccagacata
gattacatcgccattagactggacctcacagacactcgcagcaggagcataattcagtcg
gagcaggcctggatcccggtaaccattaaaggtgctatgcccaatcagccgcccaaacct
gctttcatgtccatgttcatcttagaggtggaccagttcatcctgactcctctttccacg
gcaactctggatgcagaggatgaagagacgcccaaacagaggctggtgttcaacatcact
aacccccctaatgagggcttcattactcatctgtctgatcacacgaaacccatctcctcc
ttcacctggatggatctcaacgacatgctgatcagctaccagcctccaaactccagtcac
acacagcgtaggaactatgaggtggagtttgaggtgcatgatttctactttgagaaaagc
cagcctgtgatggtacatgtgtcaatcaggacagctgataccaatgcaccaagagtatca
tggaacatgggcctcagtctgttggaaggtcagtctcgtccaatcacatgggatcagttg
cagattgttgataatgacaacctgaaggctgtgaagatcatcactgtggatggcctgcag
catggcagactaactgttagaggtggaaaaggtttcatgttcactgtgaacgatattaag
gatggtgcggtacactaccatcatgatgacagtgacactactaaagattatatagttttc
cggattactgatggcttacatcagactagacacaagttttccatcaacgtcctgcccaaa
gatgacagtccacccttcctcattaccaatctggtgctggagctgtctgaaggtcagact
ggtcttttgagaggatccattttgcaagcttgtgatatggactccagtgatgactacatc
atgttcaacatcaccagacctcctcaggcaggggaaatcatgaagatgcctggtcctggg
ataacaggataccctgttacccgttttcttcagaaggacctctttcattcaatcatctac
tatcggcactcaggcagtgaggtgtttgatgactcttttgaagtggtgctctctgatttt
cacgaccctcctaatctttcagagcctcaggtcattgtgattcaaatccagccagtacct
gatcagcctccacaagaggcaccaggtgtgaccaggcacttggttgtcaatgagacagat
gtcacctacttgaccaagcaacagctgcactttgttgacttggagtcaccagatagtgag
ctcacatacaccgtcaccaccccacctttctacagcaccacctatggagggtctgatgca
ggaaggttgtttctggttgatagcatcccaaaatttaacaaggacccaaacgccccaatg
ctgagacttttcactcagaatgcagtcaactacatgaaagttgcttacatgccccccatc
ctggacattggaccctacccccagcacatccagtttgtcctgtcagtgaccaaccagcaa
ggcagcatgaccgctggaatctgcttcaacataacgattctgccagtggataacctggca
ccagaggtacatgtgaggcagatgacggtggatgaggggggagagagctgggtgagtgaa
gaacacatgcgtctaactgaccaggactcgctcgaggactctctgcatgtgaagctgatg
acggaacctcagcatggcagtatttacctggatggcacacccatgagtccaggccagact
tttacagtcagggatctgaaaaacttaaaagttagatatcaccacgacagttctgagaca
gaacatgatgatattaaattcattgccacagatgggattaatattgctgactttgtacta
catgtcaaggtgacgctagtcaacgatgaggtgccagtgctagtggcaggtttgaaagcc
attttagcctgtgcagagggacaggaagtggtcatctccgtggagtacatctgtgccaca
gatcctgacagtgatgatagcacattgatgtatttgatcgcccaacaaccatatcatggg
gtggttcaaagaaatggtatcgtggtggaccgcttcattcaagcagatataactgctggc
ttaatttcctatagacacacaggacaagagattgggctacaaccacgtcatgacgttgtc
acgtttgtgatctctgatggagaatcagggctacttccttcctgttgcagtgataaagcc
acattattcagtgcacaaacacctggagtacagaactccctgcctgtctatgaccttaat
atcaccgtttatcctgtgaacaaccaaccaccatctattgctgttggagaggtgtttaag
gtggatgagggagggtcagcctccatcacagtgacccatctgagagttgaagaccaagac
tctgctccagaggatcttaagctcatcctggttgctcctccacagttcggctacatagag
aacatcctgcccagtccaggatttgaaaagagcaacatgggaatcagtattgcctgtttc
acctacagggatgtgttgaatggacacattaactatgtccagtctagacaccagaggatg
gagccgaccactgaccagctcatgctacatgtgtccgatgggaaacagcagtcctcttca
gtaccgttctacatcatcatcattccgaccaatgatgagattccagagttcctggccaga
aacatcacggttcgagagggagacatgaaagagttggacccatctataatcagtgcggtg
gatcttgatgttcccagagaccatttaatattcagcatagtccagcagcctcagcacggc
tccatcatgagtgtcccacatggcaatgatgtgacacattataagcgcggatctgagatc
cctgtggagcacttcaccatggatgacctcaggagcggcatgactctgatatacatgcat
gacgactctgagagtgagaaggatggatttattgttcagctctctgatggaaaacaccag
ctccagaaacatgtgcaggtcaaagtactgcctgtcaatgatgaggagccacaaattata
cggaacactggcattgagatcgaggctggggagtccagactgatctccagtgctgtgctt
agtgctcacgacaaagatacttcttcttctaacatcatctatgtgtttgagagcataccg
agtcatggtgtcattcagatgaaggttggcacagactgggtgtctgtatctgcaggaatg
aactgctctcagcaagttttggatatgaacctgttacgttaccttcacaccagtcatcct
ggagcacccgctgctgacttctttgtcttccatctgttggatggcaagaaccgctctcct
gctcagcacttccacattacagtcaaagagctagagaaaggagacatagcattgttcctg
aagcctgtgaggtctagtcgtggggagcgtgtggttctcaccacagacgtcttgctggca
gtagacggcgctgacaagccggaggagctgctctacattatcacggtacctccagcacat
ggacatgtggagtacatcaaacacactggcgtgcaaattcagtcgttcagtcagctggac
gtagcagcaaacctggtgtgttatgtacacgacaacagagccacttcacctaaagagacc
ttgcggtttgtggtcagcaatggcatatcaactcgcaacgggacactggagatcttagtg
gaattgactgataaggttctgcccacactagtgcataacactggtctacgggttccccag
gggtccaccataactttgacacctgatgccttattcctgtctgaccctgacagcccacac
actgccttgagctacaaggtggtccaccttccccagtatggccagttgctcttaaaagga
cagccactggttgctggtagccgttttacccagcagaatattcaggatctggctgttgca
tacagacactctggaggagcttctcagatcgatcgcttcagattcacagcctccgacagc
acagaaagaggcttcctgctggacggaaaagtgcaaactgagccggtcttcttcactctg
caaattgaagctctcgacagctctgctccacagatagcagtgctagaaaccctgtggaaa
gtggagctcctcaaagatggtcgttatgggatctttatttcatccagagagcttaaggct
caggatactaactctgcaaatggtgacctgatctatcacatcctcagatcgccttacttt
ggatacctggaaaattgtaccaatggtgagtttgttaggcatcgtttctctcagagggat
ctgaacagaaggaatattctctacatcataaactctgctctggacgctttaactgacagc
ctggagtttgctgtttctgatgcactgggcaacactggaccctctcacaaattggagttc
agctgggccagtgtagagttgaccaggactgagtatataatatgtgagagtcaggggtca
gtctcactaaccatccagaggaaggggaatgtgcaggactcgtcttatgtgactgtaaag
gtgaaagaaataacagcatctgctggacatgattttataccagcttcatctttgattcag
tttgacccagggatggtcagtcgagtatggaaagtggagattgttcaagatcgtttggag
gaagtggatgagaaatttgaggttaccttggcatctccggtgggtgcagtgctgaaagac
aaatcaaaagccaccatcttcataaaggacacaaatgggcagtgcagagagaaccggatc
aaagcaggcactagcattcaaggccaagaggttcagccagggccgtaccctcaacacggc
tccatccaggtggaaacattacctttctctcaaggctatatcagaggtgatggagatata
atagttgaagctccctccactacaaagaaaagactcagagtcattgggaatgggaaagtg
gttcagccttcagaaaccattaatcatggatctgacgtcatttacagatatcatggtatc
gtatcgatggcagtggaggaggacaaagctgactcaaggactgacagaatggcacaggtg
caggttaccagctgggggcagcaaagctctcctgcggtcaggacaaaactacagcaaact
gcctcacatgcaaacagcagagtttcgcagccttttctgactcagccttcctctaaaccc
tgtactccagagctcactggctttctccattacaacgacagcttaggtcagctgtttcgc
tgtaatggtgactcctggaggccctggacacctactaatgagactgtgaaagcacagaaa
tgtcctcgaggatggacgtaccacaacaactactgctacatactgagcacagagcgcaaa
gccacgtggagcgctgcggtgcgggcctgcagagaaagattcaatggaaacctggtcagt
gttttgtcaaaaggagacatggactggctgtgggacttcagtgaaagaaaacccttttgg
attggtctgaatgatcgtgaaagtaaaggccgctgggagtgggtgggtggagagcccgtc
acttacactaactggaggcaaagccctccaaaaaacaggaagaagggaacaaggaagtgt
gtcctggtctggaggaagacgaaatggcagatacgagactgtaagaaaggaaagggacac
cgctatgtgtgttatgttaaaatgtga
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integrated database retrieval system
