Chanodichthys erythropterus (predatory carp): 137030909
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Entry
137030909 CDS
T10334
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137030909 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cery03310
]
137030909 (rorc)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137030909 (rorc)
Nuclear receptors [BR:
cery03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
137030909 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CTNNB1_binding
Motif
Other DBs
NCBI-GeneID:
137030909
NCBI-ProteinID:
XP_067257536
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Position
2:complement(13355986..13399560)
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AA seq
508 aa
AA seq
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MENDEPESPDPNHDNTQSKRGNSVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LFAEVERHRQQQRLQANSVQEPQSLPAYRSSKEPREQSSHLIPPLPPAYPYSVEPELPGC
PPEVHAYLECRIGEAQAQSLAYRSSHRRGESNSLSAGRGFDSTRSTPEAILNMNGSEMGF
RPFDPESSFFSYPTPLHIEEISASIVRSHRETTQYRLEELQALRWKVFSREEIHAYQSKS
VDEMWQHCAVRLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTE
NNTVFFDGKFAGTELFKSLACSDLIAAVFDFAHNLCALRLTEQQMAVFTALVLINAVDRP
CLEDRERVQKVRRDVELALSHILHRDNQESLLHKLYQRVPVLKSLCALHIEKLRWFRQLY
PLTVHSLFPPLYKELFGSDTDIQTLTTH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgagcccgaatcgccggacccgaaccacgacaacactcagagtaaaaga
ggaaattcagtgcacaagaaatcccatctgactcagattgaggtgatcccatgtaagatc
tgtggagataaatcttcaggggttcattatggagttatcacttgtgagggctgcaagggc
ttcttccgcagaagtcagtcctccagcgttcagtactcgtgctccaggcagagcaactgc
cccattgaccgcgccagccgtaaccgctgccaaagctgccgcctcaaaaaatgtgtcgct
caggggatgagccgtgacgctgtgaagtttggccgcatgtccaagcgtcagagagactcg
ctgtttgcagaagtcgagagacatcgacaacagcagcgtcttcaggccaactcagtccaa
gagcctcagtctctcccagcctaccgatccagcaaagagcccagagaacagtcatcacat
ctcatcccgcctctacctccagcctacccttattctgtagagcctgaactgccaggctgc
ccaccagaggtacatgcatacctggagtgtcgcataggcgaggcccaggcacagagtctg
gcctacaggagctcccacaggagaggtgagagcaacagcttgtcagctggtagaggattt
gactctacacggtctacaccagaggctattttgaacatgaacggcagtgaaatggggttt
cgtccttttgaccctgagagctcgtttttttcctatccgacccctctgcacatagaggag
atctcggcaagtatcgttcgttctcacagagagacaactcagtatcgactggaggaactg
caggctctcagatggaaggttttcagcagggaggagatccatgcttaccagagcaaatcg
gtggatgagatgtggcagcactgtgcggtgcggttgacagatgctgttcagtatgtggtg
gaatttgctaaacgtatcccaggattccgtcagctttgtcagaatgatcaaattgctctc
ctcaagagtgggtccatggaagttgttctggtccggatgagtcggatgtttaacacagaa
aacaacacagtattttttgacggcaaatttgcaggaacagaacttttcaaatctctcgca
tgtagcgatctaatagctgctgtatttgactttgctcacaatctgtgcgcgctgagactg
actgaacagcagatggcggtgttcactgcactggtcctcattaatgcagtagatcgacca
tgtctggaagacagagaaagagtgcagaaagtaaggagagatgtggagcttgctcttagt
cacatcctgcacagagacaatcaggagagtctactgcataagctgtatcaaagagtgccg
gtgctgaagtctctgtgtgcgctgcatattgagaaactgcgatggtttcggcagctttac
cctctcacggtgcattccctcttccctccactatacaaagagctgttcggctctgacacg
gatatacagacattgactactcactaa
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