Chanodichthys erythropterus (predatory carp): 137030943
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Entry
137030943 CDS
T10334
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03015
mRNA surveillance pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137030943 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
137030943 (acin1b)
03015 mRNA surveillance pathway
137030943 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137030943 (acin1b)
03041 Spliceosome [BR:
cery03041
]
137030943 (acin1b)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137030943 (acin1b)
Spliceosome [BR:
cery03041
]
Complex C
Other components
EJC/TREX
137030943 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
137030943
NCBI-ProteinID:
XP_067257583
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All DBs
Position
11:9518009..9542120
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AA seq
1260 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHQ
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADGPVDPEEDDLISTKG
STSFLPEKHHIVHSHLTVTQPGGGGLPQDPGLMGSHRLDTGPVPVSQESPDTKAGRIWHP
SFLPGHEEVATPSPPRAVASLSVRVVGQPERQGLPIMMPRSQEREGTAPVEAGLAHSVLQ
LSRSAGAAACSQVDSDDDEDDDDDDSEDDDEWGPSSHGKKDVRAPPVHPPPVAAPQRSRR
KLQPPQHIPPQPQPVHQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEPAEAEDAA
PGAGMVSPPSLKRQESSSSSRSSSPEPPSTRRPGPLSLLVRKMESEGVFGAQKEGMEGEG
EMEVEEQEDGEPAAQGSAQQLSGSEVPMSVPTVAPAEQDAQDSELEKEREEEKSEEKENE
KADETSAPFHLTSATTLPPRRKQIFSEVPPPESLKSPKSPSKPEQISVLTTGPKCSEDIA
METEDPKAMAESKHEEDKEVKVLEKEAPEQSPKPAEESKKALKSPHATGGGEMEKTRKSS
LREKSPGRRSSTSSQTSSSDTDSESSSSRSSSPSQEKSSLLSQKKDEKKNRRADEEENKA
QSFREVKQEALSEPAGQVAMELEGRSHSESAIHQPDHQGAESSDSHPEESSTAKSFAARK
ISLSSKTEIASSESEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQEAV
VELHPDEGRLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMEEEEDDN
EEETKWTGGEKEMHRKQESSPHASIETQEGDSKKVTPNDSLVRRSISQQKSGVSITIDDP
IRTGRQLSPPRGKTSKIIHVCNLVRPFTLGQLKELLNRTGTLVEEGFWIDKIKSHCYVTY
CSIEEAAATREALHGVKWPTSNPKVLRVDFCEQDELDFHKGLVSSDRAGVGHDPQASGTS
GRPAAHPPLPPANHEKEKERERERDGGASAVKDQWAERERAMERRERTRSEREWDRDKVK
DFGRDDRNDRTRRSRSRDRRRRERGKSKEKRVEKKDKPEEPPVKLLDDLFHKTKAAPCIY
WLPLTDEQATQRALERAERKKEREKRRKELQDEEDKKREEWKERAKGRDREGGNTGGAGA
AVVRRSTEGERDRGKERERERGREAEKRRDGHRGRGSDSKTAGGSRHSQSRSSTSRDRRH
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggcaaaccgcttcattcgcttcgtgtggcg
gatttaaaagctgccctggagcaaagagggctcgccaaaagtggacagaaaaatgcactt
attaaaaggctgaaaggggctcttatgttggagaacctccagcgaacatcaacccatcaa
attggtcttcagcccaactcacagattggagaggagatgagtcagaacagctttataaag
cagtacctggcaaaacagcaggagctcctccgacagagactggagagagaagcccgggag
gccaccgaggcagatggtcctgttgaccctgaggaggatgacctcatttcgaccaagggt
agcacttcctttctgccagagaagcatcacattgtacactctcatctgactgtaacccag
ccgggcggaggagggttgccgcaggaccccgggttaatgggatcacacaggttggataca
ggtcctgttcctgtgtctcaagaatcacctgacactaaagctgggaggatctggcatcct
tcgttcctccccggccacgaggaggtcgcaacaccctcccctccacgagcagttgcctcc
ttgtctgtgcgcgtggttggacaaccagagcgtcaaggcctgccaatcatgatgccccgt
tcccaagaaagagagggaacagcgccagttgaagcaggtcttgcccattccgtgttgcag
ctcagccgttctgcaggggccgcagcttgttctcaagttgatagcgacgatgatgaggat
gatgatgatgatgacagtgaagatgatgatgaatggggcccttcgtcacatgggaaaaag
gacgtccgtgctcctccggtacaccctccaccagttgcagcccctcaacgatcccgtcga
aagcttcagcccccacaacacatccctccccagcctcaaccagtccaccagccgcctctg
caactccgtcagcctactcctcccccatcaccacctccagagctctctttcccactgcct
gacactcccaaacagagcccgcatgaccaagatgagccagccgaagcagaagatgctgca
ccaggggctggcatggtctctcctccatccctcaaaagacaagagtccagctccagttct
agatccagcagcccagaaccaccatccacacggagacctggtccccttagcctgctggtc
cgaaaaatggagtctgagggcgtgtttggtgcacagaaggaagggatggagggagaagga
gagatggaagttgaagagcaggaggatggtgaaccagcagcacaaggctcagctcagcag
ctttccgggtcagaggtgcccatgtcagtacccacagtggcccctgctgaacaagatgct
caagactctgagttggagaaagagagagaggaggaaaaaagtgaggagaaagaaaatgag
aaggcagatgagacctctgcaccattccatttgacatcagccacaactctcccacctagg
agaaaacaaatcttctcagaggtcccaccacctgagtcacttaagtcacccaagtcaccc
tccaaacctgagcagatttcagtcctcaccacagggccgaagtgctctgaagacattgct
atggagacagaggaccctaaagcaatggctgaatcaaaacacgaggaggacaaagaagtg
aaggttctagagaaagaggctcctgaacagtcacctaaaccagcagaagaaagtaaaaaa
gccctaaaatcaccacacgctactggaggaggtgaaatggaaaaaacaagaaaaagttca
ctgagagaaaaatctcctggacgacgctcctcaacgtcaagtcaaacatcatcatctgac
acagattcagaatcatcatcctctcgttcaagttctccttcccaggaaaaatccagccta
ctcagccaaaagaaggatgagaaaaagaacagaagagcagatgaagaagaaaataaggct
cagtctttcagggaggtaaagcaggaagctctctctgagcctgcaggccaagttgctatg
gagctggagggccgctcacattcagagagtgctattcatcagcctgaccaccagggggca
gaatcaagcgactcccatcccgaggagagctccactgcaaaatcgtttgctgcccgaaag
atctccctgagcagtaaaacagagattgcatcatctgagtcagagcctgtgggtggagcc
agcaggaagagaaggtgggggtctagtacagcagtcactgccaagaagccttcaatcagc
atcaccactgaatcactgaagacactgattccagacatcaagcccctacaggaggcggtg
gtcgaactgcacccagatgaggggcgtctctctgtggatgaggactcatccgggcctcgt
gagcgagaggaaccagaggaggatcagggactcaagatcagacgcacagtgacacagatt
gttccatctgatggacatgagaatgggcagaaagaaatggaggaggaggaggatgataat
gaagaagagacaaaatggacaggaggagagaaggaaatgcataggaaacaggagagctcc
cctcatgctagcatagaaacacaggaaggtgattccaagaaagtcactcccaatgattct
ttggtgcggcggtccatcagtcaacagaaatcaggtgtgtccataactattgacgaccca
ataaggacgggtcgccagctgtctcctcctcgtggaaaaacttctaaaatcatacacgta
tgcaacctggtgcgacctttcaccttagggcagctgaaggagttgttaaatcggactggt
acattggtggaggagggtttctggattgacaagatcaaatctcactgctatgtcacatac
tgctctatagaggaagcagcagccactcgagaagcactgcatggtgtgaaatggcctacg
agtaatcccaaagtactacgtgtggatttttgcgagcaggatgagttggacttccataaa
ggtctcgtgtccagtgaccgtgcaggtgtaggtcacgaccctcaagcctcaggaacgtca
ggccgccctgccgcacatcctccactcccacctgcaaatcacgaaaaagagaaggaacga
gaaagggagcgagacggaggggcttcagctgtgaaagaccagtgggccgagagagagaga
gcgatggagagaagagagaggacccgttctgagcgggagtgggaccgggataaagtgaag
gatttcgggagggatgaccgaaacgacagaacaagaaggtcacgatcgcgggaccgaaga
cgcagagagagaggcaagagcaaagagaagagagtggaaaagaaagataaaccagaagaa
cctcctgtaaaacttcttgatgacctgttccacaaaactaaagcagctccctgtatatac
tggttacccctcacagacgaacaggcgacacagcgagctctggagcgtgcagagcgcaaa
aaggagcgagagaagaggaggaaggaactccaggatgaagaggacaaaaaacgagaagaa
tggaaggagagagcaaaaggccgtgacagagagggagggaacacaggaggagcaggggca
gctgttgtgagacgttcaactgagggagagcgagacagaggcaaggaaagagagcgagaa
aggggcagagaggcagaaaagaggagagacggccacagaggccgcggtagcgactccaaa
actgcagggggaagcagacattcacagagccgtagcagcacctccagagacagacgccac
tga
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