Chanodichthys erythropterus (predatory carp): 137031306
Help
Entry
137031306 CDS
T10334
Symbol
snx1b
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137031306 (snx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137031306 (snx1b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cery04990
]
137031306 (snx1b)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Macropinocytosis
Sorting nexins
137031306 (snx1b)
Domain-containing proteins not elsewhere classified [BR:
cery04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
137031306 (snx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
DH_Alsin
FAM92
4HB_MCP_1
Tiam_CC_Ex
Motif
Other DBs
NCBI-GeneID:
137031306
NCBI-ProteinID:
XP_067258305
LinkDB
All DBs
Position
11:27371669..27381162
Genome browser
AA seq
525 aa
AA seq
DB search
MSGSCGRNPPPFPDNEDQEAELDTRVLDSDEYDDEGEDIFTGARSKPITPTSPPDEDDIF
SEEGSFIRTDVHHATNGLHSDEELDLFTEATVELTLTNTTSQGRREIIGPTASACNTTHV
PNSILKPSIVTKTMEELEEEESGDQFELNIAVTNPEKIGDGMNAYMSYKVSTQTTLPMFH
NKTFTVRRRFSDFLGLYEKMLAKHSLLGCIIPPPPQKSVVGMTKVKVGKEDSSSAEFVEK
RRAALERYLQRVVAHPSLLQDPDVREFLERDELPRAVNTQTLSGPGLLKMINRASDAVNK
MTIKMNESDNWFESKLQEVENEEQLLRRLHAAVDSLVNHRKELCSNTAVFSKSVAMLGSV
EENTALSRALSQLAEVEDKMEQLHQQQAFSDFFILAELLADYVRMLGAVRCCFEQRMKVW
QRLQEAQSTLQKKREAEAKLLWANKPEKLQQAKDDINEWESKVSQYERDLERVTCTVRKE
VLRFEKEKARDFKQHIVKYLESLLHTQHRLVKCWEAFLPEAKAIA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagttgcgggcggaatcctcctcctttccctgataatgaagatcaggaggct
gaattagacactcgagtgctggacagcgacgagtatgatgatgaaggcgaggacatattc
accggcgcgagaagtaaaccgatcacaccgacatcacctcctgatgaggacgatatcttc
agcgaggagggctctttcatcaggaccgatgtccatcacgccactaatggccttcactct
gatgaagagctggatctgttcactgaggccactgtcgagttgacgctcaccaacaccact
agtcaaggcaggagagagattattggcccgaccgcatcggcttgcaacaccacacatgtc
cctaattccatactcaaacccagcattgtcaccaagaccatggaggagttggaggaggaa
gagagtggagaccagtttgagctgaacattgcagtcacaaaccctgagaaaattggagat
gggatgaatgcctacatgtcttacaaagtttcgactcagactacactgcccatgttccat
aataagactttcacagtgcgtcgacgtttcagtgatttcctgggactttatgagaagatg
ttggccaaacactccttgctgggctgcatcatcccacctccacctcagaagagcgtagtg
ggaatgactaaagtaaaggtagggaaggaggattcatcctcagcggagtttgtggaaaag
agacgagcagcactggagaggtatctacagagagtagtggctcatccatctctgctgcag
gacccggatgttcgagagtttttagagagagatgagttgcccagggcagtaaatactcag
actttgagtggacccggcctgctaaagatgataaacagagcgtcggacgcagtaaataag
atgaccataaaaatgaatgaatcagataattggtttgagagtaagctgcaggaggtggag
aatgaggagcagctgttaaggaggctgcatgctgctgttgactcattagtaaaccacagg
aaagagttgtgtagtaacacagcagtgtttagtaagagtgtggccatgctgggcagtgtg
gaggagaacactgcattgtctcgggcactgtcacagttggcggaggtggaggataagatg
gagcagctacatcagcaacaggccttcagcgatttcttcatcctcgccgagctcctggcc
gactacgtcagaatgctgggggctgtgaggtgctgttttgagcagaggatgaaagtgtgg
cagcgtctgcaggaagctcagagcacgctgcagaagaaacgagaggctgaagccaaactg
ctctgggcgaacaaacctgagaaactgcagcaggccaaagatgacataaatgagtgggag
tctaaagtcagtcagtatgagagagatttagaaagagtcacctgtactgtgcgcaaagaa
gtgctcagattcgagaaagagaaagccagagatttcaaacagcacatagtgaaatacctg
gagtcccttcttcacacacagcatcggctggtgaagtgttgggaggccttcctgcctgag
gccaaagccatcgcctga
DBGET
integrated database retrieval system
