| Entry |
|
|---|
| Symbol |
pdcd11
|
|---|
| Name |
(RefSeq) protein RRP5 homolog
|
|---|
| KO |
| K14792 | rRNA biogenesis protein RRP5 |
|
|---|
| Organism |
cery Chanodichthys erythropterus (predatory carp)
|
|---|
| Brite |
Ribosome biogenesis [BR:cery03009]
Eukaryotic type
90S particles
Other 90S particles
137031489 (pdcd11)
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
12:40341143..40367282
|
|---|
| AA seq |
1821 aa
MASMEEDFPRGGAEKKTTEPKRVKTHDVGNLFENRETAVKKKKKNVEQDEEGKIKRQKVV
DEKLKLNTATTVEILHLWNLNIGTLILGCVKEVSEFEVVVGLPSGLIGYLPIYNICDSYT
NILNNRLDSEDSLEAVVPLSELLTPGMLVRCVVSSLDSAKEGHVSLKVSINPKEVNKVLS
SGTLKPGMTLSGCVESVEDHGYLVDIGVSGTKAFLPKKSTASKQDLNVGQYMSILIEEVK
NDGRVVRLTQNPQALAKAFITIQHGWTLDTLLPGLLIRARVKKVTPHGLIVTFLSSFTGV
VDFLHLDEDKASTYSQGQEVLARVLHVEPSTRHVSLSLHSHLLPPGGGVLDKYFSEWVGE
VVQGCKMTVLHYHSGALMKLPDGTTAFVHKNLMKEPNEEFNPNRLLSQSEHTLRIIDYSP
MEQIHLATLRRSTIETPFFRYQDVKVGQIVEGKVTGLHQHGVNVRITDHIRGMIPRTHLA
DVVLQNPEKRFFEGLKVKCRVLSVDAQNKRLILTKKKALVESTLPLFQSYSDARVGRISH
GFIVCVKKFGCIVHFYEDVKGLVPVKELSTERVDNPEGLFFIGQVVQAKVLSCDPENKKL
CLSFKAVSEGDIKESQTEKFDFVVGKTVNARVCCKVVDGLEVSIVPEEVPAFIPTVHLSD
HVSNCFPLWMALEEGDTVSNIMCLSKNKKKGITLTKKPLLKACLEDSKVPQQFSDLQVGM
QMLGWVKNIMPYGVFVGFPHGLFGLAPKDAMADQFITNTSGIFEIGQTVVAKVTNLDEEK
QRFLVSLKVSELSLFEEGGHARFLQGLKERKDIFEMVTCRGESDVLQQLSAVSLGDKIKM
IVGDTREDGSVTLSSDRLSKVTVLASKFHTEGVNVTPGCKFSAVILHVDLLKSEVHVSLL
PELITKKKLLTKDSKLTATIQYTDKDFAVISLGDTGHLTIIPLRTQLNKILDSKKFSVGS
CLNVIVEDPSSEELGGIPLVAHQQPNAKHDKTKSKSNGQSSNFTLGEVMTVTVKKVKPTS
VLVTLPSGTSGSIHVSEIEESPEVGSFPTASLKIGTEVEASVIGGHTVRGNKFLPISHPN
FGVSLTELSLLPRKLKDAGKQSVDTMKIYTPGDEVLCFPSKYDEKTKTLEVHVKHNVTGT
VELLAMINKPGQAKHPKNLFKPGQTVSAKVVHTGSIKSSRLCLSLTGMYKLEPGLVTMAT
VWKVVPCQGLLLKLPFGNWGFASVLDVSDVYADNPLEPYKQGQLVRCYIIEKARVRNFKV
SLRPSRLHKDHHKNVTDPEIQSISDIKEGQVIRGYVTSTNDKGVFVRLSRVITGRVKLQH
TTKYFMDDPKVLSKHITPNALVTAKVLSVNTEDSHVNLSLLSEDTGKPDLLPESLDLKLR
LTGEKKAEYDEKVAKRKRALSESQQRENEKQKIKRKKVEGCPVKGECTGEKKTLKEKKKK
TKTEDSDSGVDVFFREKEETTSNKKCDQVKGKHEKTEPKRLQVTFGFPWESTLCSLTPFA
AVDDTHESSEDEQEVKSQPVKKSRKELKQEQQNAEQKLSKLEVELMDTSVRPDSSTMFER
LLLSSPDSSLLWLQYMAFHLQATEIEQARVVAERALKTISFREEQEKLNVWVAMLNLENM
YGTQESLQKVFERATQYCEPLPVYQQLADIYAKSDKIKEAESLYKNMVKRFRQEKAVYLS
YGTFLLRQRQSDAANALLQRALQSLSNKEHVDLITKFARLEFQYGNTERAKSMFDKVLST
YPKRTDLWSVFIDLMVKHGSQKEVREIFDRVIHLSVSVKKIKFFFKRYLEYEKRNGTPET
IQAVKQKAIEYVESKGAEATS |
|---|
| NT seq |
5466 nt +upstreamnt +downstreamnt
atggcatctatggaggaagatttcccccgtggcggagcagagaagaagaccactgagccc
aaacgtgttaaaacacatgatgtgggcaatctttttgaaaaccgtgaaacagcggtgaag
aagaagaagaagaacgtggaacaagatgaagagggaaaaataaaaagacagaaagtggtt
gatgagaagttaaagctcaatactgccactactgtggaaattcttcatctttggaatctg
aatattggcactctgatactgggttgcgtgaaggaagtgtcagagtttgaggtggtagtt
ggtctcccaagcggtctcattggttacctgccaatctacaacatctgtgactcgtacacc
aacattcttaataacagactggactctgaagacagtttagaggcagttgtccctctctca
gaactacttactcctggaatgctggtcagatgtgttgtgtcgtctttagactctgctaag
gagggtcatgttagtcttaaagtgtcaatcaacccaaaagaggttaacaaggtgttgagt
tcaggcactttgaaacctggaatgactctgagtggttgtgtggagagtgtggaagatcac
ggctacctggttgacattggagtcagtggcactaaagctttcctgcccaaaaagagcaca
gcttcaaaacaagatctgaatgtgggtcagtacatgtcgatcctgatagaggaagtcaag
aacgatggacgtgtggtccgtctgacccagaatccccaggctctcgcaaaagcctttata
acgattcagcatggatggactctagacactctcctgcccggactcctaatccgcgcacgc
gtaaagaaggttactcctcacgggcttatcgtgacgtttctttcatctttcaccggagtg
gttgattttctgcaccttgatgaggacaaggcatctacctacagccaagggcaagaggtt
ctggcacgggttctgcacgtggagccatccacgcggcatgtgagcctgtccctgcacagc
catcttctgccaccagggggcggtgtgctggataagtacttcagcgagtgggtgggtgag
gtggtgcagggctgtaagatgacagttttgcactatcactcaggagctttgatgaagttg
cctgacggtaccacagcttttgtgcataaaaacctcatgaaggagccaaatgaagagttc
aacccaaaccgcttgctctcccaatctgaacacactctgagaatcatagattacagtccc
atggagcaaattcacctggctacactgcgaaggagcactattgaaacgcccttcttcaga
tatcaagacgtcaaagtgggacaaattgttgagggtaaagttacaggtttgcatcaacat
ggcgttaatgtgagaatcacagaccacatcagaggaatgatacccagaactcaccttgcc
gatgtcgtcctacagaacccagagaagaggttttttgagggtttgaaagtcaagtgcagg
gtattatcagtggatgctcagaacaagaggttgatcctgaccaagaaaaaggcccttgtt
gagtccacactccctctcttccagtcctactctgatgccagggtgggccgcatctctcac
ggcttcatcgtatgtgtgaagaagtttggctgcatcgttcatttctatgaagacgtgaag
ggtctggttcctgtaaaagagctgtccactgagcgtgtggataatccagaaggtctcttc
ttcattggccaggttgtccaggccaaagtcttgagttgtgacccagaaaataagaagctg
tgtttatccttcaaggccgtttctgagggagatataaaggagtcgcaaactgagaaattt
gactttgtggttggaaagacagtcaatgctagagtatgctgcaaagtagtggatggtttg
gaggtctccattgttcccgaggaggtgccagctttcatacccacagtgcatctctctgac
catgtgagcaactgctttcccctgtggatggcgctggaggagggcgacaccgtctctaac
ataatgtgtctcagcaagaacaagaaaaagggcattactctcaccaaaaaacccctactg
aaggcctgtctggaggacagcaaggtcccgcagcaattctctgacctccaggtgggaatg
cagatgcttggctgggtgaagaacatcatgccttatggagtcttcgtcggtttcccgcac
ggactcttcggccttgctcctaaagatgccatggccgaccagttcatcacaaacacatca
ggcatctttgagatcggccagacagttgttgccaaagtgaccaatctggatgaagaaaag
caaaggtttttggtcagcctgaaagtgtcagaattgagtctcttcgaggaaggaggacat
gccagattccttcagggtctgaaggaaaggaaggacatctttgagatggttacttgcaga
ggggagtctgatgtcctacaacagctctctgctgtatcactaggagataaaataaagatg
atagtgggtgataccagagaggatggctcggtcacactgagttcagatcggctcagtaaa
gtcactgtattggcctcaaagttccacacagaaggtgtgaatgtgactcctggctgcaaa
ttcagtgcagtgattctccatgtcgaccttttaaagtctgaggtacatgtgtcgctgctt
ccagagttgatcacgaagaagaagctgttgacaaaggactccaaactcactgcaacaatc
cagtacactgataaagactttgctgtcatctcattgggtgacactggtcacctgaccatc
attccccttcggactcaattaaataaaatcttggattccaagaaattttcagttggttcc
tgtctgaatgtcatagtggaggacccgagcagcgaggaattaggaggaattcctcttgta
gcacaccagcaacctaatgccaaacacgataagaccaaatccaagagcaatggtcaatcc
agtaacttcactcttggggaagtgatgacagtcacagtaaagaaggtgaagcccacgagc
gtgctggtgacgctgccatctgggacctcaggaagtatccatgtgtctgagatagaggag
tctcccgaggttggcagcttcccaacagcatccctgaagatcgggacagaggtcgaagcc
agcgtgattggagggcacacagttcgtggcaacaagttcctgccaatctctcaccccaac
tttggtgtttccctcactgaactcagtcttctgcctagaaaactgaaagatgctggcaag
cagtcagttgacacaatgaaaatatatacacctggagatgaagtcttatgcttcccatca
aaatacgacgaaaaaacaaaaaccttagaagttcatgtgaagcacaatgtcactggaacc
gttgagctgttagccatgattaacaaacctgggcaagctaaacacccaaagaatcttttt
aaaccaggacagactgtttctgcaaaggttgtccatactggttccatcaaatcttctcgg
ctttgcctgtcactcacagggatgtacaagctggagccagggttggtcactatggcgacg
gtttggaaagttgtgccttgtcagggacttttgctcaaactcccatttgggaattggggt
tttgcttcggtattggatgtctctgatgtatacgcagacaacccactagagccctacaaa
cagggccagctagtccggtgctatattattgagaaggctagagtcaggaacttcaaagtt
tcattacgtccctccagattgcataaggaccaccataagaatgttacagacccagaaatt
cagtcaatttccgatataaaagagggccaggttatcagaggatatgtgacatccacaaac
gataaaggcgtgtttgtgaggttatcaagggtcatcacaggaagagttaagttgcagcac
actacaaaatatttcatggatgacccaaaagttctttccaaacacattaccccgaatgca
ctggtgacagccaaggttctcagtgtgaacacagaggacagtcacgtgaacctgtctctg
ctgtcagaggacactgggaaaccagatctacttccagaatcccttgatctaaaactgcgt
ctgacgggagagaagaaagcggaatatgatgaaaaagtcgccaagaggaaacgagctctt
tctgagagccaacaacgagaaaatgagaaacaaaagataaaaaggaagaaagttgaagga
tgcccagtgaagggagaatgcacaggagaaaagaaaaccttaaaagagaagaaaaagaaa
acaaaaacagaggacagtgacagtggtgtagatgtgtttttcagagagaaggaagaaact
acatcgaataaaaagtgtgaccaagtaaagggtaaacatgagaaaacggaaccaaaacgg
ctgcaggtgacatttggtttcccatgggaatcaacattgtgctctttaacaccttttgcc
gcagtagacgacacccacgaatccagtgaggatgagcaggaagtcaagagccagcctgtg
aaaaagtcccgtaaggagctaaagcaggagcagcagaatgcggagcagaagctcagcaag
ttggaggtagaactcatggacacgtctgtacgaccagacagctcgactatgtttgagcgt
ctgctcttgtcgtctccggacagctccctcctctggctgcagtacatggctttccatctg
caggccacggagatcgagcaagcgcgtgtggtcgccgagagagccctcaaaaccatctca
ttcagagaggaacaggagaagctgaacgtgtgggtggccatgctgaatttggagaacatg
tacgggacacaagagagtttgcagaaagtctttgaacgggccacccaatactgtgaacct
cttcctgtgtaccagcagttagccgacatttatgccaagtcggacaagatcaaagaggca
gagagtctttataaaaacatggtgaaacgcttcagacaggagaaagctgtatatctgagt
tacggcaccttcctgctacgacagcgtcagagcgacgctgcaaatgccctcctacagagg
gcgctgcagagcctgtccaataaagaacatgtggacctgatcaccaaatttgcccggttg
gagtttcagtacgggaatactgagagagccaaatccatgtttgacaaggtcctgagcacc
taccccaaacgcacagatctgtggtccgtcttcatagacctgatggtgaagcacggttct
cagaaggaagtgagggagatttttgaccgtgtgattcacctaagtgtgtcggtaaagaag
atcaagttcttcttcaagcgttacctggagtacgagaagaggaacggcacacctgagacc
atccaggcggtcaaacagaaagctatagagtatgtggagtcgaaaggagccgaagccacc
agctag |
|---|
