Chanodichthys erythropterus (predatory carp): 137031614
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Entry
137031614 CDS
T10334
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137031614 (htt)
04131 Membrane trafficking [BR:
cery04131
]
137031614 (htt)
03029 Mitochondrial biogenesis [BR:
cery03029
]
137031614 (htt)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
137031614 (htt)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137031614 (htt)
Mitochondrial biogenesis [BR:
cery03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
137031614 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_ECM29
OKR_DC_1_N
Motif
Other DBs
NCBI-GeneID:
137031614
NCBI-ProteinID:
XP_067258784
LinkDB
All DBs
Position
12:complement(34205080..34267182)
Genome browser
AA seq
3184 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPLSAEELVQKQKKDLATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI
MSALGHFANDGEIKMLLKAFVANLKSSSPTIRRTAASSAVSVCQHSRRTHYFYTWLLNVL
LGLVVPVDEEHSSHLILGVLLTLRYLMPLLQQQAPNTSLKGSFGLVRKEADVTPAPEQLI
QVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLNALITCGKITHTSVFREETECRA
RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFTASVGGDSSSE
APSSSGVSSLGTSDIITEQPRSSQHALQPGDSVDLSASEQGVGPDTPDEEDEEDMLSRSS
SGGAGVVSTSGDLLTDVNQMSVGAASSSPPSDSSQTTTEGPDSAVTPSDCAELVSVTSTS
RRYRNYSPPSPTPTEGPDTHSESESSIYRPSSSSSSTSSSSSTFSAISSSSSSDQVLDGS
ESQYSGMQIGTLQDEEEEGAAPQPDKPPEPFSQSALALSKPHLLEGKGHNRQSSDSSVDR
FIPKEEVLEPAELDNKPSRIKGDIGHYTHPKEEPLVHCVRLLAASFLLTGQRNGLVPDNE
VRVSVKALAVSCVGAAAALLPEAFFNLLYLQPIDGQQPDEQQYISDVLQYIEHGDPQIRG
ATAILCGALIQAIQLKTRYNTEIWLSQIHCVTGNSVTVENFVPLLQRSLKDESSVTCKMA
CAAVRHCIMALCNGSLSELGLQLLIDLMTLKDCSYWLVRTELLETLAEIDFRLISFLERK
TEKLHKGEHHYTGLLRLQDRVLNDVVLYLLGDDDPRVRHVAANTIGRLVPRLFYDCDQAQ
TDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLCQNAPDVTIENNLSRVI
TAISHALTSSTSRAMTFGCCEALYLLSSTFPVCTWSTGWHCGFVSSSVFHLNRSSQYRSR
GRSFSLSQSGSSEEVRRSLTVGVAGMVLSLLSSAWFPLDLSAHQAALLLAGNLLAAIAPK
CMKSPWAGEEESNPTPSKVEEPWPALNDRSLVVMVEQLFSHLLKILNICAHVLDDTPPGP
AVKATLPSLANTPSLSPIRRKGKEKEMTEPSNTPMSPKKGGETNTGRAADSTATAAVNKS
TTMGSFYHLPPYLKLYDALRATHANYKVTLDLHNTNEKFGGFLRSALDVLSQLLELATLH
DIGKCVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEGASSHPCRSQGKALR
LGSTSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDASGWFDVMQKVSNQLRSN
ITNVTRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLRVNYCL
LDSDQVFIGFVLKQFEYIEVGQFRDSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLC
DGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLVQHHQV
LEMFILILQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGVLNTLFETVAPS
SLRPVDMLLKSMFITPSTLASVGTGQLWVSGILAILRVLISQSTEDIILSRIQELSLSPY
LLSCPTIRRLCDDDSSPPEAPPATMEDANGEPQRFPPEETFARFLLQLVGVLLDDIATKQ
VKVDMSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKAEGGEGGHFYTLEGL
NSLVLQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPRRHSLSSTKLLSPHSSGEEE
RPEGKLAMCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPPVQDLI
SAVHRNSAASGLFIQAIQSRCDNLSTPVMLKKTLQCLEGIHLSQSGALLMLYVDKLLNTP
FRVLARMVDTLACRRVEMLLAETLQNSVAQLPLEELDRIQQYLQTSGLAQRHQRFYSLLD
RFRATVAKDTKSPTAPITTHPLDGDPPPPPENVEPNKEWYVALVKSQCCLRGEGALYENT
ELLTKLPQSDLNTIMTCKDFNLCLLASCLSVGVQRVCKDHGAVLFDTAQQVAFDRLAGVI
ELLPSPHQPLLASAKTCTDYWQKLNQVYGEPGFYQTVLSLCGVLSQYLLSLSKLPSSLHI
PKDRETLITTFSTLAIEVVVWRLLQDQLPLSVDMQMSLSCLCLALQQPAVWTHFASHSYL
THTCSIIHCIELLIHAVAVGPGDQLLRPERKTSQTEQSEDQLDSADNQREWRCCVIMAEL
VEGLQSVLALGHHRNKNIPAFLTPTLQNVIISLARLPLVNSYTRVPPLVWKLGWSPRPSG
DFGTALPEIPVEFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEE
ETQQEEDLERTQINVLAVQAITSLVLSAMTLPTAGNPAVSCPEQQPRNKILKALDTRFGR
KLSVIRGMVEREIQAMVSKRDNIATHFPYQAWDPVPSLSSSTAGTLISHEKLLLQINTER
EMGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADAPAPASPQLSPINSRKHRAG
VDIHSCSQFLLELYSQWILPGSPSSKKTPVVLISEVVRSLLAVSDLFTERNQFDMMFSTL
TELQKVHPPEDEILSQYLVPAICKAAAVLGMDKAIAEPVCRLLESTLRSTHLPSRIGALH
GVLYVLECDLLDDTARQLIPTVSEYLLSNLKAIAHCVNLHNQQHVLVMCAVAFYMMENYP
LDVGPEFNAGIIQLCCMMLSATEEATPSIIYHCVLRGMERLLLSEQLSRMDAETLVKLSV
DRVNMPSPHRAMAALGLMLTCMYTGVAGEEGKEKGSPGRPADADPTAPDSESVIVAMERV
SVLFDRIRKGFPSEARVVARILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVVYK
VFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVIS
RMGKSDTVDISLFCLVAMDFYRHQIDEELDRRAFQSVFEMVALPGTPYYQLLCCLQSIHQ
DTSL
NT seq
9555 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctaatgaaagcgtttgagtcgcttaagtcattccagcagcag
caaggcccgctgtcggccgaggagctcgtccagaaacaaaaaaaagaccttgctacgacc
aaaaaggacagagtgactcattgcctgacgatatgtgaaaacatcgtggcacagtcgctg
aggacatctccagagttccagaaactgcttggaattgctatggaaatgttcttgctgtgc
agcgacgacaaggagtctgacgtcaggatggtggcagatgagtgcctaaacaaaatcatc
aaagcattgatggattccaacttgcctagactgcagcttgagctgtacaaagagattaaa
aagaacgctgcctctcggagtctgcgggcagccctgtggaggtttgctgagcttgctcac
ctggtgcgtccacagaaatgcaggccgtaccttgtgaatctgctgccatgtctgacacgg
atcacaaaacgtcaggaagagactgtgcaggaaactctttcttcttcaattcctaaaatc
atgtctgcccttggacacttcgccaatgacggagagatcaagatgctgctgaaggctttt
gttgccaatctgaagtcaagttctcccactattcgccgaacagcggccagctcggctgtc
agcgtgtgtcagcactcacgcagaacacactacttctacacctggctcctcaacgtgctg
ctcggtttggtggtgccggtggatgaggagcattccagtcacctgattctgggtgtatta
ctgacgttgcgctacctaatgcctcttcttcagcagcaggctcctaacactagcctgaag
ggcagctttgggcttgttcgtaaagaggctgatgttacccctgcacctgagcaactcatt
caggtctatgaactgaccctgcactacacgcagcactgggatcataatgtggtgacggca
tctttggagcttcttcagcagatgtttcgcactcctccccctgaactcctgaacgcactc
atcacatgtggcaaaatcacacacaccagtgtcttcagagaagagacagagtgccgtgca
cgcagtggcagcatcctcgagcttattgccggtgggtcaacatgcagtcctctcctcctc
aggaagcagaaaggtaagctgttgtcgggtgaagaagagggtttggaggatgaccctgag
agggcagaggtcaccactggatccttcactgcctcggtcggtggcgatagctccagtgaa
gctccctcctcatcaggcgtttcgtctcttggcacatctgacatcatcacagagcagcca
cggtcctcccagcatgccttgcagccaggggactcagtggacctgagtgcatcagagcag
ggtgtagggcctgatactccagatgaggaagatgaggaggacatgctaagccgcagctca
agcgggggcgctggggtcgtcagcacgtctggcgacttattaaccgatgtcaaccagatg
tcagtgggagccgcgtcatcgtcgccccctagtgacagttcccagacgactacggagggg
ccggactccgccgtgacgccttcagactgcgccgagctcgtaagtgtcaccagcaccagc
aggcgctatcggaactattcaccaccttccccaactcccacagaagggccggacacacac
tccgaaagcgagtcgtctatctacaggccatcctcttcctcctcctctacctcgtcttct
tcttccaccttttctgccatctcttcctctagcagtagtgaccaggtgctggatggcagt
gagagtcagtactcagggatgcagatcggcacactgcaggatgaagaagaggagggtgca
gctccacaacctgataaacctccagagcctttctctcagtcagcactggctttaagtaag
ccccatcttctggagggaaaaggtcacaacaggcaatcatctgacagcagtgtggatcga
ttcataccaaaggaagaggttctggaacctgcagaacttgacaacaagccatctaggatt
aaaggagatattggtcactatactcacccaaaggaagagcctctggtgcactgtgtccgg
ctgttggctgcgtccttcctgctcaccggccaaagaaatgggctggttcctgataatgag
gtgcgtgtgagcgttaaggcgttagccgttagctgtgtgggggcagcagcagctcttcta
cctgaagccttctttaacctactctacctgcagcctatagatggacaacaaccagatgag
caacagtacatcagtgatgtactgcaatacattgaacatggagatcctcagatcagagga
gccaccgccatcctgtgtggggctttaatccaagccatccagctcaagacacgctacaac
acggagatatggctgtcccaaatccactgtgtcacaggtaactctgtgacagtcgaaaac
tttgttcctctgctgcagcgaagtctaaaagatgaatcttcagtcacgtgtaaaatggcc
tgtgctgctgttaggcactgcatcatggcattgtgtaatggcagtctcagtgaacttggc
ctgcagctgctaattgatctgatgaccctgaaggactgctcttattggctggttcgcact
gagctcttagagacgcttgctgagatagatttccggttaataagttttttggagagaaaa
actgagaagttgcacaaaggagagcatcactacactgggttgttgaggctacaggacaga
gttctgaatgatgttgtgctttatctactgggcgatgatgacccacgtgtgagacatgtg
gcagcaaacaccatcggcaggttggtgcccaggttgttctatgactgtgaccaggctcag
acagacccagttgtggctatagcacgagatcagagcagtgtgtacttgcagctgctgatg
cacgagacccagcctccatcacagtttactgtcagcactatcacacggacataccgtggc
tacaatctgtgccagaacgcgccggatgttaccatagagaacaacctatctcgggtcatc
actgccatctcccatgccctcacctcctccacttccagagccatgacttttggatgttgt
gaggctctgtaccttttgtccagcaccttcccagtgtgcacctggagcacaggctggcac
tgtggctttgtgagctcttctgtctttcatctcaaccgctccagccagtaccgcagccga
ggacgctcctttagtctgtctcagtctggaagtagtgaagaggtgcgcaggtctctgacg
gttggcgtggccggtatggttttgtctctcctctcctctgcttggtttcctcttgatctc
tccgcccatcaggctgctcttctgctggctggaaaccttcttgcagctattgcaccaaag
tgcatgaagagcccatgggccggtgaggaggaatctaaccccacgccctctaaggtggag
gagccgtggcctgcccttaacgaccgttctctggttgttatggtggagcaactgttctcg
cacctgcttaagatcctgaacatctgcgctcatgtgctggatgacactcccccaggccct
gcagtcaaggctactttaccctcattggccaacactccctctctcagtccaatcagacgg
aagggtaaagagaaggagatgacggagccaagcaacacccccatgagcccaaagaaagga
ggagagaccaacacaggcagagcagcagacagcacagcaacggcagcggttaacaagtcc
accactatgggcagcttttatcacctccctccttatttgaagctttatgatgcactgaga
gctacgcacgctaactacaaagtcacattagaccttcacaacaccaatgagaagtttggg
ggtttcctgaggtcagcgcttgatgtcctttcacagctgcttgagttggccaccctgcat
gatattggcaaatgtgttgaagagatcctgggctaccttaagtcctgtttctcacgggaa
cctactatggccaccgtgtgtgttcagcagcttttgaaggcgttgtttgggaccaatctt
gcctctcagtatgagggggcttcatcccacccgtgtcggtcccagggcaaggccctccgg
ctcggctcgaccagcgttagacctgggctctaccattactgcttcatggccccttacact
cactttacccaggcactcgcagacgccagcctcagaaacatggtgcaagctgaacaagaa
caggacgcctctgggtggtttgatgtcatgcaaaaagtctccaatcaacttaggtcaaac
atcacaaatgtcactcgccatcgaggagacaagaatgccattcataatcacatccgtttg
tttgagccgctggtgattaaagctctgaagcagtacaccaccagcacctcagtggccctg
caaagacaggtgctggacctactcgcccaacttgtgcagctccgggtcaactactgtttg
cttgattcagaccaggtattcattggttttgtgctgaagcagtttgagtatattgaagtg
gggcagttcagggactctgaagagattgttcccaacattttcttcttcctggttctgctg
tcctatgagcgctaccactccaaacagatcatcagcatcccaaagatcattcagctgtgt
gacggcatcatggccagtggcaggaaggcagtaacgcatgcaatccctgcactgcagccc
atagtgcatgacctctttgtgctgagaggctccaataaagcagatgcaggaaaagagctg
gaaactcaaaaggaagtggtggtgtccatgcttctacgcctcgttcagcaccatcaggtg
ctggagatgtttattctgatcctacagcagtgccataaagagaatgaagataagtggaag
aggctttcacgacagattgctgacatcatcctgccaatgatcggcaaacagcaaatgcac
ctggactcccatgaggcattgggtgtgttaaacacactgtttgagactgtggctccctcc
tctctgcgacctgtagacatgctactgaagagcatgttcatcacaccatctacccttgca
tcagtgggtacggggcagttgtgggtgtctgggattctcgccatcctgcgtgtcctaatc
tcgcagtccacagaggacatcattctgtctcgtattcaggaactttcactgtcaccatac
ctcctctcctgtcccactatccgtcgattgtgtgacgatgactcctcccctcctgaagct
ccgcctgctaccatggaagatgccaatggggagccgcagcgttttcctcctgaggaaaca
tttgctaggttcttattgcagttggtgggggtgttgctggatgatatcgccacaaagcag
gtgaaagttgacatgagcgagcagcagcacacgttctactgtcagcagctgggcacactg
ctcatgtgtttgatccacatcttcaaatcaggaatgttccggcggatcacggcagcgggc
agcaggcttctgaaggcggaaggaggggaagggggtcatttttataccctggagggtctg
aacagcctggtgctccagctcataaccacacacccatctctggtcctgctctggtgtcag
gtccttctcatcatcaactacaccaactacacctggtggtccgaggtgcatcagaccccc
aggaggcacagtctgtccagcactaagctgctgagcccgcactcatctggagaggaggag
aggcccgaggggaagctggctatgtgtaacagagagattgtccgacgaggagcccttatc
ctcttctgtgactatgtgtgtcagaacctgcacgactctgagcatctgacgtggctgact
gtaaatcatgtgagcgatctgattagtctttcccatgagcctccagtgcaggatctcatc
agtgctgtgcaccgaaattcggcagccagcggactcttcatacaggccatacaatcacgc
tgcgacaacctttctactccggtgatgctgaagaagaccctgcagtgtctggagggcatt
catctaagtcagtctggggctctgctcatgctatacgtagacaaactactcaacacgccg
ttccgtgtgctggctcgcatggtggatacactcgcctgcagacgcgtggagatgctgctt
gccgagaccctgcagaatagtgtcgctcagctaccactggaggagctggacaggattcag
cagtacctacagaccagtggccttgcacaaaggcatcagcggttctactccctgctggac
aggttcagagccactgttgctaaagataccaaaagccctactgcacccattaccacacac
ccactggatggggacccaccccctccccctgaaaatgtggaacccaataaggagtggtat
gttgctctggtgaaatctcagtgttgtttgagaggtgaaggagctttgtatgaaaatact
gagctcttgacaaaacttccccaatctgacctaaacacaatcatgacctgcaaggacttc
aacctgtgtctgctggcatcatgtctgagtgttggggtacagagggtatgtaaggatcat
ggggcggttttatttgacactgctcaacaggtggcctttgatagattggctggtgtcata
gagctcctcccctcgcctcatcagcccctcctcgcctctgctaagacgtgtacggactac
tggcagaagcttaatcaagtatacggtgagcctgggttttatcagactgtgttgagtctg
tgtggcgtattgagtcagtacctgctgtctctgtccaaattgccgtcctcactgcacatt
cccaaagacagagagacactcattaccaccttcagcaccctcgccatagaggtggtggtt
tggcgtttgctgcaggatcagctgcctctgagtgtggacatgcagatgagtctgtcgtgt
ctgtgtctggctctccagcagccggcggtgtggacacactttgcctctcactcctacctc
acacacacctgctccatcatccactgcatagagctccttatccacgcagtcgctgttggt
cctggcgaccaacttttgaggccggagaggaaaacatcacaaacagagcagtcagaagac
cagttggactctgcagacaaccagcgtgaatggcggtgttgtgtgatcatggctgagctg
gttgaaggtctacagagtgtgctggctctgggtcaccatagaaacaagaacatcccggca
ttccttacgcccaccctacagaacgtcattatcagcctggccaggcttccccttgtgaac
agctacacccgagtcccaccactggtctggaagctgggctggtcccccaggccgagtgga
gatttcggcacagcattaccagagatccctgtagagttcctgcaggagaaagatgtcttc
agagagttcctctatcgcattaacactctgggctggagtagtcggacacagtttgaggag
acgtgggccactttgttgggggtgctggtcactcagccaatcacaatggaccaagaggag
gaaacccagcaagaagaggatctagagaggactcagataaatgtactggcagttcaggcc
atcacctctctggtgctgagtgccatgactctgccgacagcaggaaatccagctgtcagc
tgtcctgaacagcaaccccgcaacaaaatccttaaagctctggacaccaggtttggtcgt
aagctgagtgtgattagaggtatggttgagcgtgagattcaggccatggtgtcaaagaga
gacaacattgccacgcacttcccctatcaagcctgggaccctgtgccctctttatcttcc
tcaacagcaggcaccctcatcagtcatgagaaactcctgctgcagattaatacagaaagg
gagatgggcaacatggactacaaactgggccaagtgtcgattcactcagtatggttggga
aataacatcacccctctgagggaggaggagtggggtgaggatgaagaagatgaagcagat
gctccagcacctgcatcaccacaattatcaccaatcaactccaggaagcaccgtgctggg
gttgacatccactcctgctctcagttcctcctggagctctacagccagtggattctccct
ggcagcccaagcagcaagaagactcctgttgttctaatcagtgaggttgtcagatcgctg
ctggcagtttctgatctgttcaccgagaggaatcagtttgatatgatgttctccactctg
actgagctgcagaaagtccatccaccagaagatgagatcctcagccagtaccttgtgcca
gctatctgcaaagcagctgcagtgcttggcatggataaagccattgcagagcctgtgtgc
cgtcttctggagagcaccttgcgcagcactcatctgcccagtcggatcggtgctcttcat
ggagttctatacgtgctggagtgcgatctgctggacgatacagcacggcagcttatccct
actgtcagtgaatacctgctctccaaccttaaagctatagcacactgtgtgaatctacac
aaccagcagcatgtgttggtgatgtgtgctgtggcattctacatgatggagaactacccc
ttggatgtagggcctgagttcaatgccgggatcattcagctgtgctgtatgatgctgtct
gctaccgaggaggccacaccatccatcatctaccactgcgtcctgcgaggtatggagcgg
ttgcttctgtccgagcagctgtcgcgcatggacgcagagacgctggtcaagctgagcgtt
gaccgtgtgaacatgcccagcccacaccgtgccatggctgccctgggtctcatgctcacc
tgcatgtacacaggtgtggctggagaggaagggaaggagaagggaagtcctgggcgccct
gctgatgcagaccccacagctcccgatagcgagtcagtcattgtcgcaatggagcgggta
tctgttctgtttgacaggattcgtaaaggctttccgagtgaggcacgagtggtagcccgg
atccttcctcagttcctggatgactttttcccactgcaagacgtcatgaacaaagtcatt
ggggagttcctgtccaatcagcagccttacccacaattcatggctacagtggtctacaag
gtatttcaaacacttcatgcaactgggcagtcctccatggtccgtgattgggtgctactc
tcgctgtcaaacttcacacagagaacacctgtcgccatggcaatgtggagcctgtcctgt
ttctttgtcagtgcctcgaccagccaatggatctctgccctcctgcctcatgtcatcagt
cgcatgggaaagtctgacacagtggacattagcctcttttgtctggttgctatggatttc
taccgacaccagatcgatgaggagttagaccgcagggccttccagtctgtctttgagatg
gtggctttacctggtactccgtattaccaactactgtgctgtttgcagagcattcaccaa
gacacgtcactataa
DBGET
integrated database retrieval system
