Chanodichthys erythropterus (predatory carp): 137031617
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Entry
137031617 CDS
T10334
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137031617 (ssrp1b)
03036 Chromosome and associated proteins [BR:
cery03036
]
137031617 (ssrp1b)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
137031617 (ssrp1b)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
137031617 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137031617
NCBI-ProteinID:
XP_067258796
LinkDB
All DBs
Position
12:complement(34639977..34660812)
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AA seq
701 aa
AA seq
DB search
MSDTLEFNEIYQEVKGTWNDGRLRFSKQTVVFKNSKTGKVDSISVSELTQAQWRRVCLGH
GIKLCSSTGHIYKYDGFKDTDLEKISEYFKANYKVELMEKDMSVKGWNWGTAKFNGPLLS
FEVNDSPAFEIPLSSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMNEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEANDSDDSEGESDES
FNPGEEDDEIAEEYDSKASASESSAEGGDSDEDRKKKPAKKAKFVKERKPRKKEKKAKDS
SAPKRPMSAYMLWLNASRDRIKSEHPGISVTEISKKAGEMWKQIGKDKKEEWEGKAEEAK
KEYERAMREYKESGGGSSGSSKKEMKKKGGKNEEKKKRKSGGGREKEKERATGNDSFKSR
EFISSEESSSESEKGKGRKRKGSDDEEEVVSTPPSSESGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactctggaattcaatgaaatttatcaggaggtcaagggcacctggaatgat
ggccgtctgcgcttcagtaagcagacagtggtgtttaaaaacagtaagaccgggaaggtg
gacagcatttcggtctctgagctcactcaggcccagtggaggagagtctgtctgggtcac
ggcatcaaactgtgctccagcactggccacatctacaaatatgatggcttcaaagacact
gaccttgagaagatctcagagtacttcaaagccaactacaaagtggagctgatggagaaa
gatatgagtgtgaagggctggaactggggcactgctaaatttaatgggccgttgctttca
tttgaggtgaatgacagtcctgcttttgagattccactctccagtgtatcccagtgtgct
acgggaaagaatgaggtcactgtggagtttcatcagaatgatgacacagaggtatccctc
atggaggtgcgcttctacgtcccacccaccacaggagacgagggttcagaccctgtggag
gcatttgctcagaacgttctgtctaaggcagatgtcatccaggctacaggagatgctgtg
tgtatcttcagagagttgcagtgcctcacacctaggggcaggtacgatatccgtatttat
ccaacattcctccatctgcatggtaaaacatttgactacaagatcccatacaccacagtg
ctccgccttttcctgttgcctcataaagaccagcggcagatgttctttgtgatcagtctg
gacccgcccattaaacagggtcagacccgctatcattttctcattcttctgttctccaag
gaagaggacatcagcctcactctcaacatgaacgaggatgaggtggagagacgttttgaa
ggaaaacttaataaaaacatgtctggctctctttatgagatggtcagcagagtcatgaag
gccctggtcaacaggaagatcacagtgcctggaaatttccaaggtcactcaggagctcaa
tgtataacatgttcatataaggccacttcagggctgttgtatcctttggaaagaggtttt
atctatgtacacaagcctccggtgcatctgcgctttgaagagatcgcctgcgtgaacttc
gcccgtggaaccaccaccacccgctccttcgatttcgagattgagaccaagcagggcaat
cagtacaccttcagcagcattgagagggaggaatatggtaaactctttgactttgtcaat
gctaagaagttaagcatcaagaacagaggctttaaagagggtatgaaaggtaatgacaac
atgtacagcgactcagacgacgaccagcatgatgcgtacctggagcgcatgaaagaagag
ggcaagatccgtgaggaggccaatgacagtgacgactcagagggcgagagtgatgaatct
tttaatcctggagaagaagatgatgaaattgcggaggagtacgacagtaaggcctctgcc
agtgaaagcagcgctgagggtggggacagtgatgaagaccgcaagaagaaaccagccaag
aaagcaaaatttgtaaaagaaagaaaaccacgcaagaaagagaaaaaggcaaaggatagc
agtgcccccaagagaccaatgagtgcctacatgctctggctgaacgctagcagagaccgc
attaaatcagagcacccaggcatctctgtcacagagatctcaaaaaaagctggagaaatg
tggaaacaaattggcaaagacaagaaagaggagtgggaaggaaaagcagaggaagcaaag
aaagagtatgaacgagcgatgagagagtacaaggagagtggtggaggatcttcaggcagc
tcaaaaaaggagatgaaaaagaaaggagggaagaatgaagaaaagaagaaaaggaagtca
ggtggtgggagggagaaagagaaggagcgagcaacaggcaacgacagctttaaaagtcga
gagttcatatccagtgaagagagctcatcagagtcagaaaaaggcaagggacggaagcgc
aaggggtctgatgatgaagaggaagtggtcagcacaccgccaagctctgagtcgggctca
gactga
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