Chanodichthys erythropterus (predatory carp): 137031634
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Entry
137031634 CDS
T10334
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137031634 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137031634 (smarca5)
03036 Chromosome and associated proteins [BR:
cery03036
]
137031634 (smarca5)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
137031634 (smarca5)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
137031634 (smarca5)
RSF complex
137031634 (smarca5)
WICH complex
137031634 (smarca5)
B-WICH complex
137031634 (smarca5)
NORC complex
137031634 (smarca5)
BRF complex
137031634 (smarca5)
NuRF complex (fruit fly)
137031634 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
137031634
NCBI-ProteinID:
XP_067258839
LinkDB
All DBs
Position
12:43242427..43255320
Genome browser
AA seq
1035 aa
AA seq
DB search
MSQTESSVEQQQREEPSQLDSVGPAEDDASENGRDEASDTAMDSEAHSSSSPSSKEKDQP
GGYEEKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
VGDNRHRRTEQEEDEELLNESSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMVIIERAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
TKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKE
QGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQVSINAFNEPNSSKFVFML
STRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPNMSKLGKDEMLSIIRHGATHVFASKESEITDEDIDAI
LERGEKKTMEMKEKLANLGESSLRNFTMDTENSVYNFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGY
KVPRNPDLPNSAQMQKEEQAKIDEAEPLNEEELEEKENLLSQGFTIWTKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPRTSSAQKRKQ
DGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaacagaaagcagcgtggagcagcagcagcgggaagagccgagccaactcgac
tcggtcggtccggcagaggatgatgcttcagaaaatggtcgtgatgaagcatcagataca
gcaatggatagtgaagcgcactcatcatcatctccctcatcaaaagaaaaggaccagcct
ggcggatatgaagaaaaagtgaaaacagaccggaccaacagattcgagtacctcctgaag
cagaccgaagtatttgctcatttcatccaaccagctgcccagaagactccaacttcacct
ctgaagatgaagcctggtcgccctcgcatcaaaaaagacgagaagcagaacctgctctct
gttggagataaccgccaccgtcggactgagcaggaggaggatgaggagctgctaaacgag
agcagcaaagccaccagtgtttgcacacgttttgatgattctccttcttatgtgaaaacc
ggcaaactgagagactaccaagtccgtggactgaactggctcatttccctatatgagaat
ggaatcaatgggatccttgctgatgaaatgggtcttggtaagactcttcagaccatctct
ctgctgggctacatgaagcactatagaaacattcctggacctcacatggttctggtgccc
aagtccaccctgtataactggatgaatgagttcaagcgctgggttccctctctacgagcg
gtctgcctcattggggacagggatgaaagaactgcttttatccgtgacacgctgctgcca
ggtgaatgggatgtgtgcgttacctcctatgagatggtcattatcgagagggctgtcttc
aaaaagttcaactggagataccttgtcattgatgaggctcaccgtatcaagaacgagaaa
tcgaagctttcagagattgtgcgagagttcaagaccacaaatcgattgctgctgactgga
accccactgcagaacaaccttcacgagctgtgggcgctgctgaacttcctgctgccagac
gttttcaactcctcagaggattttgattcctggtttgacaccaataactgtctgggagac
acaaaattggtggaacgtctacatactgtacttcgtccattcctgctgaggcgtatcaaa
gccgatgtggagaagtctctcctccccaaaaaggaaatcaagatgtatattgggctcagc
aagatgcagagagaatggtacaccaagatcttgatgaaggatattgacattctgaactct
gctggtaagatggacaaaatgcgtctgttgaacgtgctgatgcagctcaggaaatgctgc
aaccacccctacttgtttgatggcgcggagcctggccctccttacaccactgacctccac
ctggtggtcaacagcggaaagatggtggtgctggacaagctgctgcccaagctgaaagag
caaggttcccgtgtgctgatcttcagtcagatgaccagggtgctcgacattctggaggat
tattgtatgtggcgcaactatggttactgtcgtctggatggacagactcctcacgaggag
cgacaggtctccatcaatgcattcaatgagcccaacagctcaaagtttgtgttcatgttg
agcaccagagcaggaggtctcggtatcaatctggccaccgctgatgttgtcatcatctac
gactctgactggaatccacaagtggatcttcaggctatggatcgtgcccacaggattggt
caaaagaaacaggtgcgcgtgttccgattcatcacagaaaatacagttgaggaaagaatt
gtggagcgtgcagaaatgaagctccgcttggactccattgtcattcaacaaggcagactg
gtagatccaaatatgagcaaactgggtaaagatgagatgctgtccatcattcgacatggt
gccactcatgtgttcgcctctaaggagagtgagatcaccgatgaagacattgatgccatc
ttggagagaggagagaagaagaccatggagatgaaggaaaagctggccaatcttggagaa
agctcgctgaggaacttcaccatggacacagagaacagcgtgtacaactttgagggtgaa
gattacagagaaaagaaaaaggtcatcactaactggattgagccacccaagagagagcgc
aaggcgaactatgctgtggatgcttacttcagagaggctctgcgtgtcagcgagcccaaa
gcaccaaaggctccccgtcctcctaaacagcccaatgttcaagacttccagttctttccc
cctcggctgtttgagctgctggagaaggagatcctgtattacaggaagactattggctac
aaggtgccaagaaaccccgatctgcccaactctgcccaaatgcagaaagaggaacaggcc
aagatcgatgaagctgaaccacttaatgaggaagagctggaagagaaggagaacctcctc
tcacagggttttactatctggaccaagcgtgacttcaaccagttcatcaaggccaatgag
aagtggggaagagatgacatcgagaacatcgcccgggaggtcgagggcaaaaccccagag
gaggtcatggaatattcggctgtgttctgggagcgctgcaatgagctgcaggacattgag
aagatcatggctcagatcgagagaggagaggccagaatccagaggagaatcagcatcaag
aaagcactggactctaaaattggccgttataaggcgccatttcatcagctcaggatctcg
tatggcacaaacaaagggaaaaactacacagaggaggaggatcgatttctcatctgcatg
ctgcacaaactgggattcgacaaggagagcgtttatgatgagctccgccagtgcatacgc
aactcaccccagttccggttcgattggttcctcaagtcccgcacggccatggagctccag
aggagatgtaacacactcatcacgctcattgaacgtgagaacatggagttggaggagcga
gagaaagcagagaagaagaagaggggccctcgcacgtcttcggcccagaaacgcaagcag
gacgggacccctgatggacgtggccgcaggaaaaagctcaaattgtga
DBGET
integrated database retrieval system
