Chanodichthys erythropterus (predatory carp): 137031645
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Entry
137031645 CDS
T10334
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04810
Regulation of actin cytoskeleton
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137031645 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137031645 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137031645 (itga10)
04810 Regulation of actin cytoskeleton
137031645 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137031645 (itga10)
Cell adhesion molecules [BR:
cery04515
]
Integrins
Integrin alpha subunits
137031645 (itga10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
137031645
NCBI-ProteinID:
XP_067258854
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Position
2:17149822..17218165
Genome browser
AA seq
1171 aa
AA seq
DB search
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHEDNGEKSILVGA
PWDGPQNNRKGDIYKCIVEDEINSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKDIIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLIPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLTPEGNVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYIYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVANDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPG
SALSAGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHKAGRDSACLNATVCFLALSRSPGSYGTYFDMQMGAMLDDRKISARALFDYNSQR
QTAMGVSVRVGQTMCYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFYKDCGEDDVCVTDLVLQAHMDISGTRQQPYVLRSPRRRLAVEVQLQNQLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRSQSKVKFMLEFEFSCTS
LISKVQMRLVASSDSLENEGTLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFFTHFTVQNLGCYAVRNLELSVSLPSVASGDRVFATVVDAFSHNASGVNCSIVSD
LSKLKSSQRDVRPLHPEDMKKTELLNCTSSWCVEVVCHIQQLLKGEIALIRITRRIHDNF
FRQAKFKAVTVVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKDEDEKDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagatccacaagtacctgctgttgttgaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtggacctgaagatgctctg
ttcggcttctctgtgctacaacacgaggacaatggagaaaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaggaagggagatatttacaagtgcattgtcgaagat
gagatcaattccaattgctcaaaagttaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatcttaaaaactctcatttggggatgacgctgacgcctgctgcttcagatggcttt
ctggcctgcgctccactgtggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcatctgtcaccaatgacatggagcccaaggacatcattgcacccactgcccagaga
tgcaccacatacatggacatagtgattgttttagatggttctaatagtatctacccctgg
tatgaggtgcagaacttccttagcaacattctcagcaagttccacataagccctgagcaa
atgcaggttggtgtcctgcagtatggggagatctcagtacacgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaagaacatcagtcgtcaggagggacgg
gagacccgcactgcgtacgccatccaaatggcctgcactgaggcctttagtccagacaga
ggagcaagggaaggagccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggggaagaccttcctgagtccctggctgaatgtgagaagcgtaacatcacaagatatgcc
atcgctgtattaggtcactacatccgcagacagcaggatccagagacctttatcaatgag
attaagtacattgccagtgacccagatgagaaatacttcttcaatgtgacggatgaagct
gctctaaatgacattgtagatgcattgggagatcgcatttttagtttagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacacatt
ttggatgatggaatcttgtttggcatggtgggagcatatgactgggagggaggtgtcctg
aaggagagcaaagaagggcagcttattccctcacgagaggccttcgagaaagagttcccc
ctggagctaaagaaccatgcagcctacctaggttacacagtgtcatcggtggttgtaggt
gactggaggaggttgtatgttgctggtgctcccagattcaagcacaaaggaaaggtcatc
ttgtttgacctcacccctgaaggcaatgtcataatcacgcaggccttaaatggagaacag
attggctcatattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gatatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatatctactgtctggatggggatggttttgcacctaacggtacgctgcattctcag
aagaaggcgcaggatgcacgctttggttatgctatggctgtagccaatgacttaaaccat
gatggatacgctgatctgctcgtgggagctccgctagaggatgaccaccagggagctctt
tacatctaccacggcgacgaatactacatcataccacagtacaaacaacgtatcccaggc
tccgctctctctgcagggctgcagtattttggccgtagcttgagcgctctgctggatttg
gatggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctactaaag
tcacgcagtatcgtgcagatcaatgtcagcctgtccttccagccacactccataaatgtg
atccagaagaactgccacaaggctggccgagactctgcatgccttaacgctacagtttgc
ttcttggccctgtctcgttctcctggctcttatggcacatattttgatatgcagatgggg
gccatgttggatgacagaaagatctcggctcgtgctctatttgactacaactcccagcgg
cagaccgcaatgggcgtcagtgttcgtgtggggcagaccatgtgctacacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagcttcactttgcgtttcaaaatc
aatgacacagagagcggccctgtactggacgaaggctggccaacaacattcaagaagtct
atcccattctacaaagactgtggggaagatgatgtatgtgtaactgatttggttttacag
gcccatatggacatttctggaacaaggcaacaaccatatgttttgcgcagtcctcggcgt
cggcttgctgtagaagtgcagctacaaaaccaactggaaaatgcatataacactagtctc
acacttcattactccaaaaacctgcatttcagcagcctgagtatacgggaagacgcccag
tttaagattgaatgcacggctctaagctcaaacagtcactcctgtaatgtcagctaccca
gtgtttcgctctcagtcgaaggtgaaattcatgttggaatttgagttcagttgtacgtct
ctcatcagtaaggtccagatgaggcttgttgcttccagtgacagtctggagaatgaaggc
acattgtcggacaacagtgttcagttacagagtattgtacagtatgagcctgatctcttc
atcacaagtgactccaacctaaaccgctatgaggtccatccgaccaggacagtatcagag
gggacaggaccggagttcttcacacacttcactgtgcagaatctgggctgttacgcggtc
agaaatctagagctgagcgtcagtttgccctccgtggcttcaggagacagagtttttgcg
actgtggttgatgcattttctcataatgcttcaggtgtgaactgcagtatagtcagtgat
ctttcaaagctgaagtccagtcagagagatgtacgtccacttcaccctgaagacatgaag
aaaactgaactattgaattgcacttcctcatggtgtgtggaggttgtgtgtcacatccag
cagctactgaagggagagatagccttgatccgcatcaccagaagaatacacgacaacttc
ttcagacaggccaagtttaaagcagtgacagttgtgggctcttaccagctgtctgctcgg
gagtccaatctgattacaatgggaaatgctgccctcttgagagagacagttttggaagtg
ctgaaggggcgttcgatcccgatttctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttagtattcattctttggaagctggggtttttcacaaggaaa
cagaggaaggacgaggatgagaaggatgacaactga
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