Chanodichthys erythropterus (predatory carp): 137031840
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Entry
137031840 CDS
T10334
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137031840 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137031840 (taf5)
03036 Chromosome and associated proteins [BR:
cery03036
]
137031840 (taf5)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137031840 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
137031840 (taf5)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
137031840 (taf5)
STAGA complex
137031840 (taf5)
TFTC complex
137031840 (taf5)
SAGA complex
137031840 (taf5)
SLIK complex
137031840 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Nup120_160
WD40_like
VPS8_N
PROPPIN
RAB3GAP2_N
LisH_TPL
LisH_PAC1
Beta-prop_WDR11_2nd
DUF4144
Motif
Other DBs
NCBI-GeneID:
137031840
NCBI-ProteinID:
XP_067259249
LinkDB
All DBs
Position
12:40328016..40338294
Genome browser
AA seq
745 aa
AA seq
DB search
MAAVQDGPMELDAEKETKPEILSDGSSNLSGNTGSGSLSSSPLTAAPAGGAPKMEDQQTL
IAVLQFLKRNKLSESVEILRREAGLAEDQEDSQAADGSGGGKSDGDGGDTNSLLSRVSIA
AAAAPQSTMTAMPVKSAEDQPDVRVVLSAYSQQGDPSLYKVYYSDLKNFIESVLDCHRAE
LSQLFYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYLDDLRVLCGLTKKEHMKGNE
ALLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKGQIDSM
SGSLAGEAKREVNKAKVYHGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSMGSKSK
KQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPENLPSICFYTFLNAYQGLTA
VDFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTASE
SKILHGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP
FGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTIRLWD
VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIY
ALRFSRDGEILASGSMDNTVRLWDSMKAFDEVETDDFTAATGHIHLPDNSQELLLGTYHS
KSTPVTHLHFTRRNLLLAAGAYNSQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggaccgatggagctggacgcagagaaagagacaaagccagaa
atacttagcgatggctcgtcaaacctctcggggaacaccgggagcgggtcgctctcctca
tctcccctcaccgctgcccccgccggcggagccccgaagatggaggaccaacaaactttg
atcgcagtgctgcagtttctaaagcggaataagctgtcagagtcggtggagatcctgagg
cgggaagccggtctagcggaagaccaggaggactcgcaggctgctgatggcagcggagga
gggaagagtgatggagatggaggggacacaaactctctgctcagccgggtgtccatagca
gcagcagccgccccccagagcacaatgactgccatgccagtgaagagcgcagaagaccag
ccggatgtccgtgtggtgctgtcagcgtacagccagcagggggacccctctctatataag
gtgtattacagcgacctgaagaacttcatagagtcagtgctggactgccaccgagcagag
ctgtcccagctcttctaccctctgttcgttcacatgtacctggagctggtctacaacaac
catgagaatgaagccaaggctttctttgagaagttcagcggtgatcaggagtgctactat
ctggatgacctgcgtgttctctgcggcctcactaagaaggagcacatgaaggggaacgag
gccctgctggatttccgcaccagccgtttcgtgttgcgcatctccagagactcgtaccag
ctgttgaagagacacttgcaggagagacataataaccagatatggaacatcattcaagag
cacttgtacatcgacatctttgacggcatgccccgtagcaagggtcagatcgacagcatg
tccggcagtcttgcgggagaggccaaacgagaagtcaataaagccaaggtgtaccatggg
ctgctgaaggagccagagattgaagtcccgctagatgatgaagatgatgaagcagagaat
gaggaagggaagcccaagaagaagaaaactaaaaaggacagtatgggatccaagagtaag
aaacaagaccctaatgcccctcaacagaacaggatccctctgccagagctgaaggactcg
gacaaactggataagatcatgtacatgaaggagagcaccaaaagaatccggctgagcccg
gagaacctgccttccatttgcttctatacgttcctcaacgcctaccagggtttgacggcg
gtagacttcactgacgactccagcctgttagcgggaggatttgcagactccacggttcgc
gtgtggagcgtcacacccaaaaaattacgcaaagtcaaatccgcagcagacctgaatctg
attgataaagagtctgatgacgttctggagaggataatggatgagaagacggccagtgag
tctaaaatcctacacggtcacagcgggccggtgtatggcgtcagcttcagtccagacagg
aactatctgttgtccagttctgaggacggtacagtcagactgtggagccttcaaacgttt
acatgtctcgtggggtataaaggacacaactatccagtgtgggacactcagttctcaccc
ttcgggtattactttgtgtctggaggacacgacagagtggcacggctctgggcgacggac
cattaccagccattgcggatatttgctgggcatctggctgacgtcacatgcacgcgattc
caccccaactcgaactacgtggccacaggctcgaccgaccgcactatacgcctctgggat
gtcctgaatggaaactgtgtccgcatttttacaggtcacaaggggcccatccattctctt
gcattctcacctaatggaaagttcctggcatctggatccacagatgggagagttttacta
tgggatattggacatgggctgatgatcggagaactgaagggccacactgacacaatttat
gccctcaggttcagcagagacggagaaatcctcgcatcaggctctatggataacacggtt
cggctgtgggactccatgaaggctttcgatgaagtggagacggacgacttcactgcagca
acgggccacatccacctgcctgataactctcaggagctgctgctggggacgtaccacagc
aaatccacaccagtcacccacctgcacttcaccaggcgcaacctgctactggccgcaggg
gcatacaactcccagtga
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