Chanodichthys erythropterus (predatory carp): 137031856
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Entry
137031856 CDS
T10334
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137031856 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137031856 (taf5l)
03036 Chromosome and associated proteins [BR:
cery03036
]
137031856 (taf5l)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137031856 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
137031856 (taf5l)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
137031856 (taf5l)
STAGA complex
137031856 (taf5l)
TFTC complex
137031856 (taf5l)
SAGA complex
137031856 (taf5l)
SLIK complex
137031856 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IP5PC_F
PEP5_VPS11_N
PROPPIN
WD40_like
Nbas_N
TRIP13_N
Motif
Other DBs
NCBI-GeneID:
137031856
NCBI-ProteinID:
XP_067259283
LinkDB
All DBs
Position
12:complement(44283146..44290591)
Genome browser
AA seq
603 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSDPQQYETQFSRLRSFLQDAESPLVKEVNGILFPLFLYLHLDMARCGLKGAVDSFYG
RFHSLFQQDPEQKAIVDLLRGALTLQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAICWVLSTHVQVEVTAARRTDYQLYGAGIGAGNTTSTSSSSTTWAAVDGSEGTERV
EVTAGLPQNEAALEALQDCIKRVREGPPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAG
FDNSAVKLWSLRARKLKAGPHRADVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDCSGLLSCSEDSTVRFWDLNSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGTAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtccggacggagcagatccagtacgcggtgacccagtacctgaagaggaga
cagtacatagacaccgatggctctctgaagggggccaaactctcccagtccgctgaggag
atggctgccagtctgacagttcagacggagtccagctgtgcgaatgtggtgtccgccgcc
ccgtgtcagtcagaccctcagcagtatgagacccagttctccagactgcgctccttcctg
caggatgcagaatcaccgttagtgaaggaggtgaacggcatcttgtttccactcttcctc
tacttgcacttggacatggcacgatgtggcctgaagggggcggtagactcattctacggg
cgcttccactcgctcttccagcaggaccccgagcagaaagccatcgtggacctgctacga
ggagccctcacactgcaggatgtgacctcaaaccctaaactctgctccctcctggatcac
aagtatgtggtgcacctgacggatcaagcgtacagctacctgctgcgttacctgcagagt
gacgacaacagcgccatctgctgggtgctcagcacgcatgtgcaggtggaggtgacggca
gcacgccggaccgactaccagctgtacggtgccgggataggagcaggaaacacaacctcc
acttcctcttcctccactacatgggctgcggtggatgggtcagaggggacggagcgtgta
gaggtcacagcagggttacctcagaacgaggcggcgttggaagcgctgcaggactgcata
aagcgcgtgcgagaaggtccgccttcgctcaccaccgtctgtttctacgcgttccagcac
acggatcagctgctgaacacggccgaggtgtcggcggacagccgtctgctggcagcgggg
ttcgataactctgccgtgaagctatggagtctgcgggcgaggaagctgaaggcggggcct
cacagggccgatgtgtctaaaataagactcgcctgtgatgtgctggaggaggaggcagat
gatgaggatgcctcaggcagtgagataaagaccctgcgcgctcacagcggccccgtgtac
cgcacagcgttcctgacagactgctccggtctgctgtcctgttcggaggactccactgta
cgcttctgggatctgaacagcttcacgaacaccgtcctgtaccgcggccatgcttacccc
gtctgggacgtggacgtcagtccctgcagcctgtacttctccacggcgtctcacgaccgc
accgctcgcctctggagcttcgcacgcacgtatccgctccgcctgtatgccggccacctc
tctgacgtcgactgcgtcaaattccatcccaactccaattacgtggcgacaggctcgacg
gataaaaccgtgcgcctgtggagcacgcagcagggggcgtccgtgaggctgttcaccggg
caccgaggccccgtgctctcgctggcattctcgcccaacgggaagtacctggcgtcggcc
ggagaggaccagagactgaagctgtgggacctggcgtccgggagcctgttcaaagacctc
cgcggtcacaccgacagcatcaccagcctctccttcagccaggacagcagtctggtggcc
tccgcctccatggacaactccgtgcgagtgtgggacatacgcagcgcccacggcaccgcc
cccaccgacggctccagcagcgagctgattggacaatacacgggcagcactagcaacatc
ctcaatgtgcagttcatggcctgtaacctgctgctggtgacgggcactgcgctggagaaa
caggaacagtga
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