Chanodichthys erythropterus (predatory carp): 137031898
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Entry
137031898 CDS
T10334
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137031898 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137031898 (exosc1)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137031898 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
137031898 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
137031898
NCBI-ProteinID:
XP_067259359
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Position
12:complement(45161516..45165908)
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AA seq
194 aa
AA seq
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MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacggaggactgtatc
cccggtaccggcacgtatctgcggcacggctacatcttcgcttcactcgcgggatacgtg
ctgagaaagaacgagggagaggagctcccagtgatttcagtcgtcagggagacagaagca
caacttttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacgg
tttgctaaagtccacatcttatatgtggggtcaacaccactaaaagaccggttcagaggc
accatcagaaaagaagacgtgagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggcgacattgtacttgcgaaagtgatctctttaggggatgtgcagtccaac
tacctgctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcgggg
gctcagatggtgcccatcagctggtgtgagatgcagtgtcctcggacgcacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga
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