Chanodichthys erythropterus (predatory carp): 137032222
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Entry
137032222 CDS
T10334
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137032222 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137032222 (exosc9)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137032222 (exosc9)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
137032222
NCBI-ProteinID:
XP_067259986
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All DBs
Position
12:17057117..17061968
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AA seq
393 aa
AA seq
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MRDTPLSNCERLFLLKAIEEKKRLDGRQTYDYRNIKITFGTDYGCCIVELGKTRVLCQVS
CELVPPKDSRPTEGIMFFNLELSPMASPAFEPNRQSELLVLLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHVLNHDGNLMDAASIAAISALSHFRRPDVAIQGQDVTVFSPEER
DPIPLSIYHMPICVSFAFFLQGSYLLVDPCEREERVKDGLLVIAMNKHQEICSIQSSGGI
MLLKDQVLRCSKIASVKVSEISELINKALENDRKIRKEGGKFGFAESMPKERITTLKRDK
APVEMTDVEETANDIVNRTETTTEVVPSPVLVATGTAQVGEGIVNSWGLDEDEEDEPLTE
DRKTDEVMIISDSEEEEVVILNEEAQKPKKKKK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagggatactccgctgtcaaactgcgagaggctttttcttcttaaagccatagaagag
aaaaaacgcttagatgggagacagacatacgattaccggaatattaaaatcacttttgga
accgattatggctgctgcatcgtggaacttggaaaaacaagggtgctgtgtcaggtatct
tgtgagttggtccctccaaaagattctcgtcccacagaaggcatcatgttttttaatttg
gaattgtctcccatggcatcaccagcctttgagccaaacaggcagtcagagctgttggtg
ttgttaaacagacagcttgagaggtgtctaaggaattctaaatgcatagacactgagtct
ttatgtgtagtttcaggagaaaaggtttggcagatacgggttgatgtccatgtgttgaat
catgatggaaacttgatggatgcagcaagcattgctgccatatctgcactctcacacttt
aggcggccagatgtcgctattcagggacaagatgttactgtgttcagtccagaggagaga
gatccaattcctctgagcatttatcacatgcccatatgtgtcagctttgctttcttcctg
cagggctcgtatttgcttgtggacccttgtgaacgagaagagcgagtgaaggatggattg
ttggtgatagccatgaacaaacatcaggagatctgctccattcagtccagtggagggatc
atgctactgaaagaccaggttttaagatgcagcaaaatagcaagcgtaaaagtttctgaa
atttcagagctcatcaacaaagccttagagaatgacagaaaaatcagaaaggagggtgga
aagtttggctttgctgagtccatgcccaaagagcgcatcacaacccttaagagagacaaa
gccccggtggagatgacagatgttgaagagacagctaatgacattgtgaacagaacagaa
actaccacagaagttgttccctctcctgttcttgttgctacgggaactgcacaggtaggt
gagggcattgtgaactcatggggacttgatgaggatgaagaggatgagcctctgacagag
gacagaaaaacagatgaggtgatgataatctcagacagtgaagaggaggaagttgtcatt
cttaatgaagaagcccagaaacccaagaagaagaaaaaatga
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