Chanodichthys erythropterus (predatory carp): 137032261
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Entry
137032261 CDS
T10334
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137032261
03012 Translation factors [BR:
cery03012
]
137032261
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137032261
Translation factors [BR:
cery03012
]
Eukaryotic type
Initiation factors
eIF-3
137032261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR19_1st
RRM_1
Tricorn_2nd
Beta-prop_RIG_2nd
PD40
DUF5734
MRX12_C
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
137032261
NCBI-ProteinID:
XP_067260068
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All DBs
Position
12:11686087..11701540
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AA seq
682 aa
AA seq
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MQDTVNMAAESEFDEEEEPLFSDPEDFVEDIDDEELLEDVLRERPLEADGIDSVVVVDNV
PQVGPERLEKLKNVIHKIFSKFGKITNEFYPEAAGTTKGYIFLEYLSPNQALEAVKNADG
YKLDKQHTFRVNLFTDFDKYMNISDQWETPEKQPFKDFGNMRHWLEDADCRDQYSVIYES
GERTAIFSNDPKEAILVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFS
HQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWS
QDGKFFARMTQDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNIIAFWVPEDKDIPAR
VTLMQFPSRLEIRVRNLFNVVDCKLHWQRQGDYLCVKVDRTPRGTQGVVTNFEIFRMREK
QVPVDVVEMKESIIAFAWEPNGSKFAVLHGESPRINASFYHVKSNGKIELIKMFDKQQAN
SIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTIMYIAEHYMASDVEWDPTGRYVVTSVSW
WSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKAIKKDLKKYSKIFE
QKDRLSQSKASKELVDKRHLMMEEYRQYKESAIQLYNQQRELRLQLRGGVDTDELDSNVE
DWEEETIEFFISEEIISLGDLK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacggtaaatatggcggctgaatcagaatttgatgaagaagaggagcctttg
ttcagcgatccggaggattttgtggaagacatcgatgatgaagaattgttggaggatgtt
ttaagggagagacctctggaggctgatgggattgattctgtggtcgtggtggacaacgtt
ccccaagtgggccctgaacgtctggagaaactgaaaaatgtgatccataaaatcttctcc
aagttcggaaaaatcactaacgaattttaccctgaagcggctgggaccaccaaagggtat
atctttctggagtatttgtcccctaaccaggctctggaagcagttaagaatgcagacggt
tacaagctggacaaacagcacacattcagagtaaatctgttcacagattttgataagtac
atgaacatcagtgaccaatgggaaacccctgaaaaacagccttttaaagactttggcaac
atgaggcactggcttgaggatgcagactgtcgtgatcaatacagtgtaatttatgaatca
ggagaacgaactgccatattttccaatgacccgaaggaggcgatactggttgaagagaga
gctcgctggacagagacttacgtccgctggtcacccaaagggacgtacctggccactttt
caccaacgaggaattgcattgtggggtggagaaaagttcaagcagatacaaagattcagc
caccagggtgtgtctctcattgacttctccccatgtgagaggtatgtggtgacattcagc
ccactgatggacactaaagaagaccctcaagccattatcatctgggacatcttgactgga
cagaagaagcgaggcttccattgtgagagttcggcacactggcctatttttaagtggagt
caggatgggaaattctttgccagaatgacacaagatactctcagcatctatgaaacccct
tcaatgggtctgctagataagaagagtttaaaaataagtggaataaaagatttctcttgg
tcaccgggagacaacatcattgccttttgggtcccagaagacaaggacattccagccagg
gtaacgctaatgcagttcccatcccgtttagagattcgggtgcggaatcttttcaacgtg
gtggactgcaagcttcactggcaacggcagggtgactacttgtgtgtgaaggtggaccga
acgcccagaggaacacagggtgtcgtcacaaactttgagattttccgcatgagagagaaa
caggttcctgttgatgtggtggagatgaaagagagcatcattgcatttgcctgggagccc
aacggcagtaagtttgcggtactacatggagaatctcccagaataaatgcctcattttac
cacgtcaaaagcaatggcaagattgagctcataaagatgtttgataagcagcaggccaac
agtatcttttggagtcctcagggtcagttcatggtactggcaggactgcggagtatgaac
ggtgcgcttgcatttgtggacacgtcggattgtaccatcatgtatattgcggagcattac
atggcctctgatgtggaatgggatcctacaggcagatatgtggtgacttctgtttcctgg
tggagccacaaagtggacaatgcatactggctttggacgttccagggacgccttctgcaa
aagaacaacaaagacagattctgccagttgttatggagaccacgccctcctactttactc
agtcaagagcaaataaaggccattaagaaggacctcaagaagtattcaaaaatctttgag
caaaaggacagactgagccaatccaaagcttccaaggagttagtggacaaacgtcatctg
atgatggaagaatacaggcagtacaaagaaagtgccattcagctttataaccagcagaga
gagctgcgccttcagctcagaggaggtgtggacacagatgagctggacagtaatgtggag
gactgggaagaggaaaccatcgagttcttcatcagtgaagagatcatttctctcggagat
ctgaagtag
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integrated database retrieval system
