Chanodichthys erythropterus (predatory carp): 137032291
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Entry
137032291 CDS
T10334
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137032291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cery03009
]
137032291
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
Pre-60S particles
RNases
137032291
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
137032291
NCBI-ProteinID:
XP_067260116
LinkDB
All DBs
Position
12:complement(56020450..56029553)
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AA seq
748 aa
AA seq
DB search
MIIRLKKSIMKIETPADPQMESPSSSSSSSSCSSSKRRADSVMSDCQKRLKLHQDVLTAK
DVCDLIQYITLKRCNRVKKPSWFSVSDDARLSRVNVMILDGLTQSHFYRYFSQFRHLQRY
SSRWTLTPSSCDPLTSDLLSSKVTVETHMPLPASLMCHPVIRRFGSSAAGLSSFLLTEQE
MIKHNFPVKGGRGCEGFVCTESDGRVTDGSPLFGLDCEMCLTTEGLEVTRVALVDADGRC
VLDELVKPPNRIINYCTRFSGITRSILKPVSTRLEDVQSKLLQLLPRDAVLVGHSLDGDL
RVLQMIHPHAMDTSLLYRQEFGRRFKLKRLAQVILNREIQSEDRRGHDPCEDALAALHLA
QYFIRKGPREVLEDHHDELWDFPEIDDHVILSDHQLSSLSFGHALYGSGQSALFLGRAAE
TNGSVSNQQCRRQQCFSDREVVCVFRRLVQSYSLSVLQFSSFSNTLNQTTATGRQRHLQQ
VCERLGQMCVLYVGPLAADSTERHVHTLLKRCGRLRTVRLLHHTHGVHAEVVFEHLEGAQ
LALDHLDGHQINGCTIKVRRPVHDLCLDLDERLSERLNDRLNIHMIYVCNLSTKPHRHDD
LLQTFRQFGPIQQVPSAAEDAGKRSRHAFIKFECADSAQAAVGVNLQIGSRKLSVCHALT
PPHMTSWMHTHTVTTETSPETAEQREECDVSCDLQEPLLERQMKKLDGRVGKVFRALERN
CLSVVILPGDSSGGGDHPGLCFIHIKQT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgataatcagactgaagaagagtatcatgaagatcgaaacaccggcggatccacagatg
gaatcaccttcatcatcatcatcatcatcctcgtgctcgagcagtaagaggagagcagac
agtgtgatgtcagactgtcagaagagactcaagctgcatcaggatgtgctgacggcgaag
gacgtgtgtgatctgatccagtacatcacactcaagcgctgtaacagagtgaagaagccc
agctggttcagcgtcagtgatgatgcgcgtctgtcccgcgtgaacgtgatgatcctggac
ggactgacgcagagtcacttctacagatacttcagtcagttcagacacctgcagagatac
agctcaagatggactctgacgccctcgtcatgtgacccgctgacctctgacctcctcagc
agtaaggtcaccgtagaaacacacatgccgctgccagcctcgctgatgtgtcatcctgtg
attcgccgcttcggatcgagcgccgccgggctgagcagcttcctgctgaccgaacaggaa
atgatcaaacacaacttccctgtgaagggtgggcggggctgtgaggggttcgtgtgcacc
gagagcgacgggcgcgtgacggacggcagtcctctgttcggcctggactgtgagatgtgc
ctgacgactgaggggttagaggtcacgcgtgtggcgctggtggacgctgatggacgctgt
gtgctggatgagctcgtcaaaccaccgaaccgcatcatcaactactgcaccaggttttct
ggcatcactcgctcgatcctgaagcccgtctccacgcgtctggaggacgttcagagtaaa
ctcctgcagctgctgccgcgggacgctgtgctggtcggacactctctggacggagacctg
cgcgtccttcagatgatccaccctcacgccatggacacgtctctgctgtaccgtcaggag
ttcggccgcaggttcaaactcaagcgtctggctcaagtgattctgaaccgcgagatccag
tcggaggaccgcagaggtcacgacccctgtgaggacgcgctggccgctcttcatctggct
cagtacttcatcaggaagggacccagagaggtgcttgaggatcatcacgatgaattgtgg
gattttcctgagatcgatgatcatgtgatcttgtccgatcatcagctcagctctctcagc
ttcggccacgccctctacggatccggccaatcagcattgttcctgggcagagcagcggag
acgaacggctctgtgtccaatcagcagtgccggagacagcagtgcttcagtgacagagag
gtggtgtgtgtgttcagacggctggttcagtcttattcactcagtgtccttcagttctcg
tcgttcagcaacacactgaatcaaacgaccgcgacgggacgacagcgccacctgcagcag
gtgtgtgagcgtctggggcagatgtgtgtgttgtatgtgggcccgctggccgctgacagc
acagagagacacgtacacacactactgaagcgctgcggacgcctgcggaccgttcgactg
ctgcaccacacacacggggttcatgcggaggtcgtgttcgagcatcttgaaggagctcag
ctcgctctagatcatctggatggacaccagatcaacggctgcaccatcaaggtgcggcgt
cccgtacacgatctctgtctggatctggacgagcgtctctctgaacgtctgaacgaccgc
ctcaacattcatatgatctacgtgtgtaatctgtccactaaaccgcatcgccatgacgac
ctgctccagaccttcagacagttcggccccattcagcaggtccccagcgccgcagaggat
gctgggaaacgcagcagacacgccttcatcaagttcgagtgcgctgacagcgctcaggcc
gcagtgggcgtcaacctccagatcggcagcaggaagttgtcagtctgtcacgctctgact
ccgccccacatgacctcatggatgcacacacacaccgttactacggaaaccagcccagag
acggcagagcagagggaggagtgtgacgtgtcatgtgacctacaggagccactgctggag
cgtcagatgaagaaactggacgggagagtgggaaaagtgtttcgagcgctggagaggaac
tgcctgagcgtcgtgatcctgcctggagacagcagcggcggcggcgatcatcccggcctc
tgcttcattcacatcaaacagacgtga
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