Chanodichthys erythropterus (predatory carp): 137032298
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Entry
137032298 CDS
T10334
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137032298 (pcdh10a)
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Protocadherins
137032298 (pcdh10a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
CDC13_N
Motif
Other DBs
NCBI-GeneID:
137032298
NCBI-ProteinID:
XP_067260136
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All DBs
Position
12:12443556..12464990
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AA seq
1001 aa
AA seq
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MILIFLFFSILDGGLSQLHFSVPEEQERGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVNERIDREEICRQTVPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDITVEITESATPGTRFPVENAFDPDVGTNALNTYAITTNNYFYLDVQTQGDGNRFAE
LVLDKPLDREQQAVHRYVLTAVDGGQPQRTGTALLVVKVLDSNDNAPTFDQSVYSVSLRE
NSPVGTLVIQLNATDMDEGQNGEIVYSLSSHNPPRIRDLFNIDSRTGRIEVTGEVDYEES
STHQIYVQAKDMGPNAVPAHCKVLVKLIDVNDNTPEISFSTVTESVSEQAAPGTVIALLS
VTDRDSGENGQMTCELHGEVPFKLKSSFKNYYTIVTDGPLDREKAESYTLTVVAKDKGVP
SLSTSKSIKVHVSDENDNAPRFMQSVYDVYVTENNVPGAYIYAVSAVDPDVGQNAYVTYS
ILECEIQGMSILTYVSINSENGYLYALRSFDYEQIKEFSFMVHAKDSGAPELTANATVNV
IIVDQNDNAPSIIAPLGKNGTAREHLPRSAEPGYLVTRIVATDADDGENARLSYSILRGN
ELGMFRMDWRTGELRTARRVSSKRDPPHPYDLLIEVRDHGQPPLSSSASINVVLVDSVVE
GRSGDRGSVKSKEGSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCMAGDS
CCQCCSRQARGRKKKLSKSDIMLVQSTNVASTAQVPVEESGSFGSHHQNQNYCYQVCLTP
ESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYADQQPDIISNGSILSSETKHQRTELSY
LVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHTAGADLFSNCTEECKAL
GHSDRCWMPSFMPGDSRQGADYRSNLHVPGMDAVPDTEVQESVVPGDACNRADDRSFSTF
GKDKSHHGTLTRHELHTLLPSARAPYKPNYLCEYSLKMYDF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatatttctctttttctcgatcttggatggagggttatcgcagctgcacttc
tcggtaccggaggagcaggagcgcgggacggttgtgggaaatatcgccgaagatctgggg
ctggacatcaccaaactttccgcgcgccgtttccagaccgtgcctagctcgcgcacgccg
tacctggaggtcaacttagagaacggagcgctggtggtgaacgagcgcatcgaccgagag
gagatatgtcgccagaccgtcccgtgcctcctgcacctcgaagtgtttttggagaacccg
ctcgagctgttccgcgtcgagatcgaggtcatggatattaacgacaatccgccgagtttc
ccagagacggacatcaccgtggagatcaccgagagcgccacaccgggcacccgcttcccg
gtggagaacgccttcgaccctgatgtggggactaatgccttgaacacatacgccatcacc
accaacaactacttttatttggacgtacagacgcagggcgacggcaaccgtttcgcggag
ctcgtgctggataaacccttggaccgagagcagcaggcggtgcacaggtacgtgctcacc
gccgtggacggagggcagccgcagaggaccggcactgcacttctagtggttaaagtactg
gactcaaacgacaacgcgcccacgttcgatcaatccgtttactctgtgagcttgcgcgag
aactctccagttggcacgctcgttattcagctcaatgccaccgatatggacgagggccag
aacggagagattgtttactctctaagtagtcacaatccgccgcgtattcgggatctgttt
aacatcgactcgcgcactgggaggattgaagtgaccggtgaggtggattacgaggagagc
agcacgcatcagatctacgtgcaggcgaaagacatggggccgaacgccgtgcccgcgcac
tgcaaagttctggtcaaactcatcgacgtgaacgacaacacgccagagattagtttcagc
acggtcacggagtcggtaagcgagcaggctgccccgggcacggtgatcgctctgctgagc
gtcactgaccgggactccggcgagaacggacagatgacctgcgagctgcacggcgaggtt
ccgttcaaactcaagtcgtctttcaaaaactattacacgatcgttacggacggtccgctg
gatcgcgagaaagcggagtcgtacacgctcacggtggtcgccaaagacaagggggtgccc
tctctctccacgagcaagtccatcaaagtgcacgtctcggacgaaaacgacaatgcacct
agattcatgcagtcagtttacgacgtgtacgtgaccgagaataacgttccgggcgcttac
atttacgcggtgagcgcagtggaccctgatgttggacagaacgcctatgtcacttactcc
atattggagtgcgaaatacagggtatgtccatcttaacctacgtgtcaatcaactctgag
aacggctacttgtacgctctgcgctcttttgattacgagcaaataaaagagttcagtttc
atggtgcacgccaaggactctggtgcgcccgagttaactgccaacgccaccgttaatgtc
atcatagtggaccagaatgacaatgcaccgtctataattgcgcctttgggcaaaaacggc
accgcgagggaacatttaccccgctcagccgagccgggatacctggtgacccgtattgtt
gccacagatgctgacgatggtgagaacgcgcgcctgtcgtacagcatcctccggggaaac
gagctcgggatgttccggatggactggagaaccggcgagctacgtaccgcgcgccgggta
tccagcaaacgggacccgccgcacccgtacgacctgttgatagaggtgcgcgaccatggc
cagccgccgctctcgtcctcggcgagcatcaacgtcgtgctcgtggacagcgtagtggag
ggccggagcggcgaccgggggtcggtgaagtccaaagagggctcgctggacctcacactc
atcctcatcatcgctctcggctccgtgtccttcatcttcctcctcgccatgatcgtgctg
gcggtgcgctgtcagaaggacaagaaactgaacatatacacgtgcatggccggagactcg
tgctgccagtgctgcagtcgccaagcgcgcgggcgcaagaagaagctcagtaaatcggac
atcatgctcgtgcagagcactaatgtggccagtaccgcacaggtgccggtggaagagtcg
ggcagcttcggctcgcaccaccagaaccagaactactgctaccaggtgtgcctgacaccg
gagtctgccaaaaccgacctgatgtttctcaaaccgtgcagcccgtcccggagcacagac
acagagcacaacccgtgcggggcaatcgttaccggatacgccgatcagcagccagatatc
atctctaacggaagcattttatcgagcgagactaaacaccagagaactgagctcagctac
ctggtggatagaccccgtcgtgttaacagttcagcgtttcaagaggcagatatcgtcagt
tctaaagacagcggacacggagacagcgagcagggagacagcgaccatgacgccaccaac
cggggccacacagcaggagctgatcttttctccaactgcactgaagagtgcaaggctctg
ggtcactccgaccgttgctggatgccctccttcatgcctggcgacagtcgccagggcgcc
gattaccgtagcaacctgcacgtcccaggaatggacgcggtgccggacactgaggtacag
gagagcgtggttccgggcgatgcgtgcaatcgggccgatgatagatcattctctacgttc
ggcaaagacaagtcacaccacggcacgctcacacgccatgagctacacacactcttacca
agcgccagagcgccttacaaacccaactatctgtgtgagtactcactcaaaatgtacgat
ttctga
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