KEGG   Chanodichthys erythropterus (predatory carp): 137032362
Entry
137032362         CDS       T10334                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
cery  Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:cery00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cery03400]
    137032362 (mdc1)
DNA repair and recombination proteins [BR:cery03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    137032362 (mdc1)
SSDB
Motif
Pfam: BRCT_2 BRCT RTT107_BRCT_5 PTCB-BRCT FHA BRCT_3
Other DBs
NCBI-GeneID: 137032362
NCBI-ProteinID: XP_067260221
LinkDB
Position
2:complement(19364677..19372430)
AA seq 1923 aa
MDATQQIEDPYSEEEDQEEEEKEGGPEREQLATLKVFKNDHIPEAEFPLYVGDNVLGRDP
AVCSVLLPARSVSGRHAVISISVFRSSSRCSGNDDAVEALLWDMGSLNGTRKGRFKLTPQ
VRYALTEGESVVIADVPCQYIGLNISNRDAHETPEKEVSKKEKKESSPLSSSDSESKLRK
GVRNGLNEKERSAFPPVPLWSHEDEEPKMCSPLPAHKQPEITLVPESDSDGESATDERKD
FVSDSASSSHLCSSTNSSFLTPAKKVIPESEDESSITPSSASMDRFRLRETSGEPCSNSS
KPGLRALNLESDTDFEETDMENSKTEVQPELSAKVELVPSAEFNMDSDTDVEEEEPETSK
AEPEAQEAVTLEKSISSVGLHMDSDTDVEEEEEEKSKTEPEAQMEQAPKVGPVPSSEFHM
DSDTDVEEEEPVAIKAKPEAQNAVTLDKSLSSVGLHMDSDTDVEEKEEESKTEAKAQIEE
APKVKSVPSADLHMDSDTDVEENEAPITENISEKKAEVLAVTESTSSAPPHTEFNLDSDT
DVEDEDDNPIKVSMVTEVSHPIGEGSDVKPTSTPGSELHMDSDTDVDEENEDKEKVKARD
LLSNSDTDDEDPFKPVAGKAVKVAESRKASVGAKAEQSKDSNHKIQDHHSQAKNCLEEPT
QAFGHFEDWELPPTQAYGAVGASAKFKPKQLDLEATQAYGTETDRDEEQEEQLNHTQPYS
NLTTAETQLISVEKTYDDDEEEDEEPHNDSHLSTADTIIIASTPRREEQTQPFSLFTAQT
QHIWEGEDKEFYQSEPTQLIEADTINEMQEGEEENMKRGRRIHGGGKVHKGKNSSSCLII
AETQPMCEEEEATDSFQKPSTRQQAEKYDSAHLDENNSSSHVTIAETQPMSDDEAPPDQD
NVVSSIHTEKPTRSHITIAETLPMFEEDQAPEDDLNEVSRRQTDKGDPIQQTEKASTSSL
AIPETNFGEDEEGQEKELISKMPSRRSRRGRPKKEKEALQPVHHTITETQIMCEEEQALD
EDMKSEINMGVPSIGQQTDEFRSPELAETDLKSCVTIAETQPMCEEEAPCEDLTNAVSTS
QIDEHSSTELPKPSSSHFIIAETQPMHEEDEGLEKHLSSKTSSRRSRRGKSKKDEDPQTS
EVAVHHTIAETQPVPEEVIERDEDLSIGVKSRRSRRGRPIKEDSVPQPAEAAVTSLSTVT
ETQPVCEDGTGRDENLSIIISKRSRRGRKKDEDEPAPSVGPNSDVMVVEAQPMSEENAQE
EPSSRSSRRQRKNKTEVESETPAPVKVQGKTKKGQEGKRKRGKALSGDEGESEEEKTTRR
GARRTGMKQKCSEKEEEERLEERNSQAEKELQEQEEREKIEKERLEHERKEQEERERTET
EIRQKLEREQKELEEKEQLKREEEEKIRKENERIQREKEEKDRLEREEKERLERESRERE
EQRQKEEERIQMEKEQKEKERLAAERERLEKQKQQKEELQMRAREQKETKDRNHKEAKKN
EQLDGDKTELETPLVPPARRTRRCSSSSMNSDQSVSSQQEPSSQRGRGRGRGRGRGRQTT
NEQPVGARQSSRRGLAIGVEDTEQDPNSTTRSRSRSSSRSSERSANSVVTSNQGMRGRGR
GRKSVKLPEPQEVSQAKTPGKGRGKGGRLSGVENVNVGMTNEREQDAEKVEDTAVPQTNS
RGRKRAANTSTSTEEAPTPTSKTPRRSVSSQAHKVLFTGLTDEDGERAVSHLGGSLAKGV
NDMTHLVTDKARRTVKFLCAVARGVPIVTPEWLKKCGKAGHFLSTDEYILKDVEQEKKFS
FSLQKALQTAQSQPLLKGYEIHVTKSVMPEPSQMKEIITCCGARFLPKMPSAHKEHTVVV
SCEQDRALCQKAVNMSLPVVSTEFLLTGILQQRVDLQAYSLTSSLDTSNQPAAPKAAAKG
RRK
NT seq 5772 nt   +upstreamnt  +downstreamnt
atggatgccactcagcagattgaggatccatactctgaagaagaagatcaggaagaggag
gagaaagaaggaggaccagaaagagaacagttagcaacactgaaggtgtttaaaaatgac
catataccagaggcagaattccctctctacgtcggagacaatgttttgggtcgtgatcct
gctgtctgttctgttctgcttccggcccgatctgtgtccggtcggcatgctgtcatctcc
atctcagtgttccgctctagcagcagatgctctggtaacgatgatgctgtggaagcactt
ttatgggacatgggcagtttgaatggaaccagaaaaggcagattcaagctgacgcctcag
gtacgatacgctttgaccgagggagagagcgtggtgatcgccgacgtgccatgtcagtac
attggcctgaacatctcgaacagagatgctcacgaaactccagagaaagaagtgtccaaa
aaggagaaaaaggaaagttcgccactatcgagcagtgactcagaatcaaagttgaggaaa
ggtgtgcggaatgggttgaacgagaaagagaggagtgcctttccccctgtgcctttatgg
agccatgaggatgaagaacccaaaatgtgttcaccactgccagctcacaaacagcctgag
atcaccctggtacctgaatcagactcagatggagagagtgctacggatgagaggaaagat
tttgtttcagactcagcatcctcttctcatctgtgtagttccacaaattcatcattcctg
acccctgcaaaaaaagtcattccagagagtgaggatgagagctccatcactccatcttca
gcctcaatggaccgattcagactgagggaaacctctggtgaaccgtgttcaaactcatct
aagcctggcctgcgagctctcaacttggaaagtgacactgattttgaggaaaccgacatg
gagaacagcaagactgaggtccagcctgaattatctgcaaaggtggaactagtaccttca
gctgaatttaatatggacagtgatactgatgttgaggaagaggagccggagacgagtaag
gctgaaccagaggctcaggaagcagtaactctagagaaatctatatcttcagttggtctt
catatggacagtgatactgatgttgaagaagaagaggaagagaaaagcaaaactgaacca
gaggcacagatggaacaagctccaaaggtgggaccagtaccttcatctgaatttcatatg
gacagtgatactgatgttgaggaagaggagccagtggcaattaaggctaaaccagaggct
caaaatgcagtaactcttgataaatctttatcctcagttggacttcatatggacagtgat
actgatgttgaagaaaaggaagaggaaagcaagactgaagcaaaggcccagattgaagaa
gctccaaaggtgaaatcagtaccttcagcagatcttcatatggacagtgatactgatgtt
gaggagaatgaggctcctataactgaaaatatctctgaaaagaaagcagaagttttagca
gtcacagaaagcacttcatcagcaccaccacatacagaattcaacttggacagtgacact
gatgttgaagatgaagatgacaatcccataaaggtttccatggtgacagaggtttcacat
cccattggagagggaagtgatgtcaaacctacatcaactccagggtcagagctccacatg
gacagcgacacagatgtagatgaagaaaatgaggacaaggagaaggtgaaggccagagat
cttctgtcaaacagtgacacagatgatgaggatccttttaaacctgtagcaggcaaagct
gtgaaggttgcagagagtcgtaaggcttctgtgggtgccaaagcagagcagtcaaaagat
agtaaccataaaatacaagaccatcattctcaagcaaagaattgtcttgaggaaccaacc
caagcttttggtcactttgaagactgggaactgccacccacacaagcatatggagctgtt
ggggccagtgctaagtttaagccaaagcagcttgatcttgaggctacgcaggcatatgga
acagagacagacagagatgaagaacaggaggagcaactgaaccatacccagccctattcc
aacctcaccactgctgaaactcagctcatttctgtagaaaagacttatgatgatgatgag
gaggaagatgaagagccacacaatgactctcacctttccacagcagacactataatcatc
gccagcaccccaagacgagaagagcagacacagcccttttctctcttcacagcccaaacg
caacacatctgggagggagaagacaaagagttttatcagagtgagcccacccagctcatt
gaggcagacaccatcaatgaaatgcaagaaggtgaggaggagaacatgaaacgaggtagg
agaatccatggtggagggaaagtacataaaggtaaaaactccagctcctgtcttatcatt
gcagaaactcagcccatgtgtgaggaagaagaagcaacagacagctttcagaaaccaagt
accagacaacaggccgaaaaatatgattctgcgcatcttgatgaaaacaattctagctcc
catgtcaccatagctgaaacacaaccaatgagtgatgatgaagcaccaccagatcaggac
aatgtggtcagcagtattcatacagaaaaacctaccaggtcccatatcaccatcgctgaa
acactaccaatgtttgaggaagaccaagcaccagaggatgatctgaacgaggtcagcaga
agacaaaccgacaaaggcgaccccatacaacaaactgaaaaagcctccacttccagtctt
gccatccctgaaacaaattttggtgaagatgaagagggacaggagaaagagctgatcagc
aagatgcctagcagaagatcacgcaggggtagaccaaaaaaagaaaaggaagccctacaa
cctgtccatcacactatcacagaaacgcaaataatgtgtgaggaggagcaagcactggat
gaagatatgaagagtgagatcaacatgggggtaccaagtataggacaacaaacagatgaa
ttcagatctccagagcttgctgaaacagacttgaaatcctgtgtcactatcgctgaaacg
caacctatgtgtgaagaggaggcaccatgtgaagatctgactaatgcagttagcaccagc
cagatagacgaacacagctccacagaactcccaaaaccctccagctcccatttcattata
gctgaaacacagcctatgcatgaggaagatgaaggactggagaaacacctcagcagtaaa
acatcaagcagaagatcacgcaggggaaaatcaaagaaagacgaggatccacaaacttcc
gaggttgctgttcatcacactatcgcagaaacccaaccagttcctgaggaagtgattgag
agagatgaagatctgagcattggtgtcaaatccaggagatcccgtagaggaagaccaata
aaagaggacagcgttccacaacctgctgaagctgccgtcacttccctttccactgtcaca
gaaacacagcctgtttgtgaggatggaaccggaagggatgaaaatctgagtataatcata
tccaaaagatctcgcagaggaagaaaaaaagatgaagatgaacctgcaccgtctgttgga
ccaaactctgatgtcatggttgttgaagcacagcccatgtctgaggaaaatgctcaagag
gaacctagtagcagaagtagcaggagacaaaggaaaaacaagacagaggtggaaagtgag
acacctgcacctgttaaagtccagggtaaaaccaaaaaagggcaggaagggaaaagaaag
agggggaaagcattgtctggggatgagggagagagtgaagaggaaaaaaccacgaggaga
ggagccagaagaacaggtatgaaacagaagtgtagtgaaaaggaagaagaggaaagattg
gaggagaggaattcccaagcagagaaagagctccaagaacaggaggagcgagagaagata
gaaaaggagagactggagcatgagagaaaggaacaagaagagagagagaggactgaaacc
gaaattagacaaaaactggaaagagagcagaaggaattagaggaaaaagaacaactgaaa
agggaagaagaggaaaaaataagaaaagaaaatgagagaatacagagggaaaaagaggaa
aaagatcgtttagaaagagaagagaaagaaaggttagagagagagagtagagaaagagaa
gaacaaagacaaaaagaagaggaaagaattcaaatggagaaggaacaaaaagagaaggaa
agattagcggcagagagagaacgattagaaaagcagaaacaacaaaaagaggagcttcag
atgagagcaagagaacaaaaagagacaaaggataggaaccataaggaagccaaaaagaat
gagcaattggatggggacaaaacagaattggaaactcctcttgttcctccagccaggcga
acacgacgttgttcaagctcatctatgaattcagatcaatctgtatcctcacaacaggag
ccatccagccagaggggccgagggcggggcaggggacggggtagaggaagacagacaact
aatgagcaaccagtcggtgctagacagtctagccggagaggactagctattggagtcgaa
gacacagagcaggaccccaattcaacaacccgttcccgatcccgctccagttctagaagt
tctgagagatctgctaatagtgttgtaacgtcgaatcaagggatgagaggaagaggcaga
ggcaggaagagtgttaaactaccagaaccgcaggaagtttcccaagctaaaactcctgga
aaaggcaggggaaaaggaggcagactttcaggtgtcgagaatgtaaatgtcggaatgacc
aatgagcgtgaacaagatgcagagaaagtagaagacactgctgtacctcaaaccaacagc
agaggtcgcaagagagcagccaacactagcacatccacagaagaggctccaacacccaca
tccaagactccaaggcgctctgtgtccagtcaggcgcacaaggtgttattcactgggttg
actgatgaggatggagaaagagcggtctcccatttgggtggaagtctggcgaaaggggtg
aacgatatgactcacctggtgactgataaggcaagacgcactgttaagtttttgtgcgct
gttgccagaggggtgccgatcgtgactcctgaatggctaaagaagtgtggaaaagctggc
cattttctttctactgatgaatatatattgaaagacgttgagcaggagaaaaagtttagt
ttcagcctacagaaggcactgcaaaccgctcaaagtcaacctcttttaaagggttatgag
attcacgtaaccaaatctgtgatgccagaaccatctcaaatgaaagaaatcatcacctgc
tgcggtgcacgtttcctccctaaaatgccctcagctcacaaggagcacactgtggtggtg
tcatgtgaacaggacagggcgctttgtcagaaggcagtgaatatgtcattgcccgtggtc
agcacagagttcctattgactggcattctgcagcagagagttgacctgcaggcctattct
ctcacttcctctctcgacacatccaatcagcctgcagccccaaaagctgctgccaagggc
cgtaggaagtag

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