Chanodichthys erythropterus (predatory carp): 137032365
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Entry
137032365 CDS
T10334
Symbol
col17a1a
Name
(RefSeq) collagen, type XVII, alpha 1a
KO
K07603
collagen type XVII alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137032365 (col17a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137032365
NCBI-ProteinID:
XP_067260222
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All DBs
Position
12:complement(41153725..41175766)
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AA seq
1464 aa
AA seq
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MDKLTTTKIVKVEGGSGGSGKEIQKHTETVTTTRLTSLPPKGNSSSVSSQQVLTSTVNSS
GSGGASGGAVLLEKKIISQTSAEGGTSRSYVISSSSSGSSASSSSGAGSVIGGFDGISRE
ISVTGPISSSTVKSSSSVVKSSSGVSTSITTVGSSSATGEDISSGFGSGSSSEFVSGSSG
SSVSVSGGSMNISRSGGGGSGSSAVMSAGGASSSMTVTKFSSSSPSGTRKGLSYSTVPPE
RKTSLNPYTGGYEGSSSGNSSPDYIKKEYGSTSVATRGRTQTRESEIRARLQSASPSTRW
TELDDVKRLLKGSRSGSISPPRSPTNTLPIPKKASVDTRHESQSGYDGSVLDAGFSGYYT
NPNNLSYTTLQQPSSPTGGMQNNLSLSSSGLGSAVYGMQNNLSTSGGALMANGMSVGHVY
AAQKNVGSTGMASSISAVPSSPITSDDVFVKDGKFIAIGKENVAAKKETERLIMSKNTGK
QFVTSTTSAGADTFSEDSLKREKKMISSSMETTTASKASTKDKATYAEIRKDESDGTGLG
FCSCCSWWKWLSASIIGLLLLLGLLCGLIALGEEVRKLKARVDAIDGGGSAASARNSRLS
SSSVVNIVDPLESSYAERISGVRADNTINLGSAPTAQDPVVLQRTIQQILRSELQSDTVR
ASLATSLRGERGEPGPKGDQGPPGVKGDAGFPGIPGPPGLIGHPGQEGPRGPKGSSGESG
TDGLPGPRGREGPAGPRGEPGSPGIGEKGEKGSSGDVGAPGLAGPPGPVGPKGDAGAQGI
PGLTGAPGPQGFRGDSGDPGPKGDKGPAGPPGVKGDQGERGPRGATGEPGLVGPAGPPGE
KGLKGSAGAPGPDGVKGIRGDQGPIGLPGARGPSGPPGDAGIPGTPGLQGPPGLPGSSGQ
PGPKGEPGEPGRVISAGANTNTVGIPGPPGPPGTPGPAGPPGLSGPIGPAGLPGPPGSKG
DKGDKGDDGKPGVSERAGTAAEPGPPGPPGPPGPPGPPGDNGQPGVGQPGPPGPPGEKGE
PGSFVPTSETFFAGPPGPPGPTGPIGPKGSQGDIGPQGFPGQPGLPGEPGIGIPGQPGGP
GPRGEQGPEGPQGPQGHQGPMGPMGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGPPGPP
GPPGPPGAPGSPSGGSPDVVQQISDYLRSEPIREYLAGPPGPPGPPGPPGSSSEDTLANR
VIDYLQRDEVRQYLIGPPGPPGPPGVPGGYGFNTQEVAGRVLSLMNDAAFRGLPGPPGPP
GPQGPPGSAGGIVSYAVNENQQQIRAEPQEFIKSHPSPEENLDHPVIAKQVAEYIISNGL
LRDQSGLIPIAGPIGPPGPMGRRGPAGLPGPIGAPGADGPQGLPGLSGPPGPPGIVLEPN
NMTEIMDYIREHRMIGPPGQKGDLGSRGEKGERGFPGFHGPAGPVGPRGSLGNPGLPGNK
GTKGEKGEKGEASYVTRRRRSTGI
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctaaccacaaccaagattgtcaaagtagaggggggatctgggggatctgga
aaagaaatccagaagcatacagaaactgtaacgaccacaagactgacatctctaccccca
aagggaaacagcagctctgtgagcagtcaacaggtactgacctccacagtgaacagctcc
ggctctggaggagcttcaggaggagctgttctgctggagaagaagatcatctcccagaca
agtgctgaagggggcacttccagaagttatgtcatatcctcctcctcatctggaagttca
gccagtagcagttcaggagcaggatctgtgatcggtggatttgacggaatatctcgtgaa
atcagtgtaacaggcccgattagtagctctacggttaaaagctctagttctgtggttaaa
agctctagcggtgtctctacctccatcacaacagttggcagttcctcagcaacaggtgaa
gacatttcttcaggatttgggtccggctcatcatctgagtttgtgtctggttcttcaggc
agttctgttagtgtttctggaggtagtatgaacatctccagaagtggaggaggtggttct
ggctcctctgcagtcatgtctgccggaggagcttccagctccatgactgtcaccaagttc
agctcctcatcccctagtggaacaaggaaaggtttgagttacagcacagtccctcctgag
agaaagaccagtctgaacccttacactggaggatatgaggggagctccagtggcaattcc
tcccctgattacataaaaaaagagtacggttcgacaagcgtagccaccagagggcgcact
cagacgcgagagagtgagatcagagccagattgcagagtgcttcaccctccactagatgg
acagagctggatgatgtaaagagattattaaagggaagtcgctccgggagcatcagtcca
cctcgttctcccaccaacactctgcctatcccgaaaaaagccagcgtggacacgcgccac
gagagccagtcaggttatgacggctcagtcctggatgctggatttagcggatattacacc
aacccaaacaatctcagttacaccacactgcaacaaccttcatcacccacaggtggcatg
cagaataatctgagcctcagctcatctggccttggtagtgcagtgtatgggatgcagaat
aacctgtcaacatctggcggtgctctcatggctaatggaatgagtgttggccatgtgtat
gcagcacagaagaatgttggcagcactggaatggcctccagtatttctgctgttcccagc
agccctatcacctctgatgatgtgtttgtgaaagatggcaagtttattgcgattggaaaa
gaaaatgtagcggctaagaaagagactgagagattgatcatgtccaaaaatactggcaaa
cagttcgtcacatccaccaccagtgctggagcagatacattttcagaagattcactcaag
agggagaaaaagatgatctcgagcagcatggaaaccaccactgcttccaaagcctcaacg
aaagacaaggcaacctatgcagagatccgtaaagatgagtctgacggcacaggactggga
ttctgttcctgctgctcatggtggaagtggctttcagcatcgattattggtcttctcctt
ctgctgggactcctctgtggtctcatcgcactgggtgaggaggtcaggaagctgaaggct
cgagtggacgctattgatggtggaggaagcgcagcctctgctcgaaacagtcgtttgtcc
tcctcctcggtggtcaacattgtggatccactggaatcttcatacgccgagcgcatctct
ggtgtccgtgccgataacactataaacctgggttcagcacctactgcacaagaccctgtg
gtcctgcagaggaccatccaacagatcctcagatctgaactgcagtcggacaccgttaga
gcttcactggcaacttcacttaggggagagagaggagaacctgggcctaaaggagaccaa
ggacctcctggagttaaaggtgatgcaggatttcctggaattccaggtcctcctggtctc
attggtcaccctggacaggaaggtcctcgaggacccaaaggaagttcaggtgaatcagga
actgatggtttacctgggccgagggggcgggaggggccagcgggtcctagaggagaacca
ggatctccaggaattggagagaaaggagagaaaggctcatctggagatgttggtgcacct
gggctagcaggaccaccaggtcccgtgggaccaaaaggtgacgcaggtgcacaaggcata
ccaggacttacaggagctcctggaccccaaggcttccgtggagattctggtgatcctgga
cccaagggtgataaaggacctgctgggccacctggggtcaaaggtgatcaaggagagaga
gggccacgtggtgccactggtgagccgggtctggttggaccagcagggcctcctggtgag
aaaggtcttaaaggatcagcaggtgctcctgggccagatggcgttaaaggaattcgaggg
gatcaaggtccgattgggttgcctggagctcggggaccatcagggcctcctggagacgca
ggaataccaggtacaccaggactccaaggaccaccaggtttgccaggttcctcaggccag
ccagggcccaaaggtgagcccggtgagcccggaagagtcatttctgcaggcgccaatact
aacactgtgggtatacctggacctcctggacctcctggaactccaggtcctgctggacca
cctggactgtcaggtccaattggtcctgctggtcttcctggtccacctggttcaaaggga
gataaaggagacaaaggagatgatgggaagcctggagtctctgagagagcagggactgct
gctgaacctggtcctcctggcccacctggtccaccgggaccacccggaccgcctggtgac
aatgggcaaccaggtgttggtcaacctggccctcctggtcctcctggtgaaaagggtgaa
ccaggaagctttgtacccacttcagaaaccttctttgctggaccgcctgggcctcctgga
cccactggacccattggaccaaagggatcacagggtgatattggtcctcaaggattccct
ggccaacctggattacctggagaacctggaatcggcattccaggacagccaggtggtcca
ggaccacgtggagaacaaggacctgagggtccacagggaccacagggacatcaaggacca
atgggtcccatggggccagaaggtccaaaaggtgatgctggagtcccaggggcccctggc
attccaggttattcctacggtggaggatccagaagcgctccaggaccaccaggtccacct
ggacccccagggcctcctggagcacctggttccccgagtggcggctcaccagatgttgtt
caacagatttcagactacctcagaagtgaacccatcagagaatacctggctggacctcca
ggcccacctggaccaccaggacctccaggatcatcctctgaggatacgctggctaaccgt
gtcattgattatcttcaaagagatgaggtgagacagtacctgattggtcctccagggccc
ccaggacccccaggtgtgccaggtggatatggctttaacactcaggaagttgctggtcga
gtgctgagcctgatgaacgatgctgctttcagaggtctgccaggacccccgggaccccca
ggacctcaaggaccaccaggaagcgctggaggaatagtgtcttacgcagtgaatgaaaac
caacagcaaatccgtgcagagcctcaggagttcatcaagagtcacccaagccctgaagag
aatttggatcacccagtcatcgctaaacaggttgcagagtacattatatctaatggcctg
ttacgggaccaaagtggtttgataccgattgcaggtccaataggaccaccaggaccaatg
ggacgacgaggaccagctggattacctggaccaattggagcacctggagcagatggacct
caaggtttgccagggctctcaggaccacctggacctccaggaatcgttctagaacccaac
aacatgactgagatcatggactatatcagagaacaccgtatgatcggaccaccagggcag
aaaggggatctgggatccagaggagagaaaggtgaacgtggttttcctggttttcatggt
ccagctggtccagttggtcccagaggttctcttggtaaccctggcctcccaggcaacaaa
ggaacgaaaggagaaaaaggagagaagggggaggcttcatacgtcactcggaggaggagg
agcacaggaatttag
DBGET
integrated database retrieval system
