Chanodichthys erythropterus (predatory carp): 137032559
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Entry
137032559 CDS
T10334
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137032559 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137032559 (vps8)
Membrane trafficking [BR:
cery04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137032559 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR5
zf-RING_11
Beta-prop_WDR3_1st
PHD_4
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_HPS5
Beta-prop_EML_2
UBA_HOIP
zf-C3HC4
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
137032559
NCBI-ProteinID:
XP_067260438
LinkDB
All DBs
Position
12:26424298..26566960
Genome browser
AA seq
1414 aa
AA seq
DB search
MAESPDSRSLVSACSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFILEDT
CLLNTENIDAHSCETSSLASSDSGDRTHLKRRRKAMETNATVHGSVLRRSLLKGISAQIV
SAADKVDAGLPTAITVSNVIAVGTSHGLALVFDQNQALRLCLGTTATGAEYGAVSALSVN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDHPALAVCNDSGGSV
FELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELKDHPITQYSLLAMASLTKILL
IGLKPSLKVWMTFPYGKTDPASVPLLAWQFVAVQKAINPVLAFCRGDTIHFLLVKKDESG
TIHVIKQRQLQLNCDLISLSWINSRTLVLMDSTEKLRVVDRPSQEELETVDMAELQLVYN
SSHFKSLATGGNVSQALALVGEKTCYQSVCSHAGQIMYLGTKSVHIMTLRNWRERVDHLL
KQEKFMEALSLAWSFHEGTAKAVLGLFADPAKRKGVVADKMVEILLQYVDRSLKKCPEQG
KIQVMEQHFQDMVPVMVDYCLLLQRTDLLFNQIYPRLVENSVARGVFLESLEPYILSERI
GCLTAPVMRDLLSYFQENGMMDSVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVFNS
GMNDYISPMEKLFQAIGPNLREGKPLTDEHVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
PQVKNQVFEFLIRLHSVEAAQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEY
QQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGVVQFDEGRLLDLAEKAEFYQICEFMYEKKHLYDKIVDCYLK
DPLRKEELFNYIHNILSMPGYSSEEKHLVWVKALQHIKDLVSINSAKTAELVAVHFADEV
QSIITSLQDDYLVFQFLKCLLDPSSREGSNPQTVLRLGSDLHELLVDLLCQFSPQQVTTF
LKISQDYRLEEAIQITEKHKLHEATAYLLERKGDVQGAFEVLLQTLKGKLHKLALEGSEA
DKPDDEEEEEETGNEVQSLLQRVDEALHDIIALCQRSSHGLNQQQREALWFPLLEAMMSP
QKLLKGADAKHTSDALKELTMKVLNSMSSFIAPPAIIQRILQDPVYGKGKLAEIQGLILG
MLETFNYEQTLLETTTNLLNSDLHWSLSHLRKAVSKGLHPRQDHCNICLQQYKRRQESEE
EIIIFSCGHLYHCQCLQRKEAGVLNERQYSWSCYKCTSNQGSRPADRPSAENSRTRSASL
AQTKVTSAHRGNVAEAHGRKMLTEATLDAQQTQAWDQFRTLYRGPSRLAVLTELTHSHGN
ERAGLSNPAPPGTGSIYHSENFQLKLSPPPLVEE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctccagacagtcgcagtcttgtttctgcgtgttcacagctcaatttaatg
gaaatagaggcgattgatgataaagagtttgacatccctcaagtggacacgcctccgacc
ctggagagcatcctgaatgagcctgaagatgaggatgagccatttatactagaggacacg
tgtcttttgaacacagagaacattgatgcccactcgtgtgagacctcttctctagccagc
tctgacagtggtgaccgcacacacttaaagaggaggaggaaggcaatggaaactaatgct
acagtacatggatctgttcttagacgcagtttgctgaaaggcatctcagcccagatagta
tctgctgcggataaagttgatgctggcttgcctacggcaataactgtttcaaatgtgatt
gctgttgggacgtcacatggactggccttagtatttgatcagaaccaggctctgcgtctc
tgcctgggcaccacagcgacaggagcggagtacggggcggtgtcagctcttagtgttaat
catgactgcacacgactactgtgtggttttgccaaaggacagatcaccatgtgggatctg
gccaatgggaagctgctccgcactatcacagatgcccatccacctggcactgctatacta
catgtgaagttcactgaccacccggcgctagctgtatgtaatgacagtggtggatcagtg
tttgagctgtcattcaggagggtaatgggaatgaggacgtgtgaatccaggtgtttattc
agtggttctaaaggtgaggtttgctgtgttgagcctctacatgctggacctgaactgaaa
gatcatcccattacccagtactccttgctggccatggcatcactcactaagattctgctg
attggactgaagccttcactcaaagtgtggatgacttttccctacggcaagacggatcct
gcgagcgttcccttgttggcgtggcagtttgtggcagtacagaaagcaatcaaccctgtt
ctggccttctgtagaggagacaccatccactttctgctggttaaaaaagatgagtctggc
accatccatgtcatcaaacagagacagctccaactcaactgtgacctcatcagtctgagc
tggataaactctcgaacgcttgtgttaatggacagcacagagaagctgcgagtggtggat
agacccagtcaggaggagctggaaacagtggacatggccgagttgcagctggtttacaac
agcagccattttaaatccctcgccactggtggaaatgtcagccaagcgttggcattagtt
ggagagaagacatgttaccagtctgtttgcagccatgcagggcagattatgtatctggga
acaaagtctgtgcatatcatgaccctgaggaactggcgtgagcgtgtggaccatctgttg
aagcaggagaagttcatggaggctctgtctctggcctggtccttccatgagggcaccgcc
aaagctgtgttaggtctatttgcagaccctgctaagagaaaaggcgtggttgcggacaag
atggttgaaattttgttacagtatgtggatcgctctctgaaaaagtgtccagagcaaggg
aaaatccaggtgatggagcagcacttccaggacatggttcctgttatggtggattattgt
ctccttctacagaggacggacctactgtttaaccaaatctaccctcggctggtggagaac
tcagtggccaggggtgtgtttctggagagtctggagccctacattctgagtgagcggatt
ggctgtctgactgcacctgtcatgagagacctcctcagctacttccaggagaatggcatg
atggatagtgtggagggatgcctggtccacatggacatcaccaacctggacatacaacag
gtggtgcagatgtgctgggataaccagctgtatgacgccatgatctacgtcttcaacagt
ggcatgaatgactacatcagccccatggagaaactctttcaggcgattggtcctaatctg
cgtgaaggaaagcctctcacagatgagcatgttgtgatgggaaataaactgctggtgtac
atcagctgttgtttggcaggacgtgcctatccgttaggtgacattcctgaagatctggtc
cctcaggtgaaaaaccaggtgtttgagttcctcattcgtctgcactcggtggaggctgca
caggaagaggaagtgtatccctacatccgaactctcctgcacttcgacactcgagagttc
ctcaacgttcttgcgctgacatttgaggacttcaagaacgacaagcaggctctggagtat
cagcaaaggattgtagacattttactgaaggttatggtggacaattctgacttcacccca
tctcaggtcggctgtcttttcaccttcttggctcgacagcttgccaaacctgataatacc
ctctttgttaaccggaagctgtttgaccaggttctagagtttttatgtagtccagatgat
gattctagacatacagaaagacagcaggttctgctggagctgctgcaggttggtggtgtg
gtccagtttgatgaggggcgtctccttgacctcgcagagaaggcagagttttatcaaatc
tgcgagtttatgtatgaaaaaaagcacctttatgacaaaattgtcgactgctacctgaaa
gaccctttgagaaaggaggagctcttcaactacatccataacattctgtccatgccaggc
tacagttcagaagagaaacatttggtgtgggtcaaagcccttcaacacatcaaggatttg
gttagcattaactctgctaagacagcagagctggtggcagtgcactttgcagatgaggtg
cagtccatcatcacatctctgcaggatgactatttggtgttccagtttctgaagtgcctc
ctggaccccagctccagagagggttcgaatccacagactgtcctaagattgggctcagat
cttcatgagttgttagtcgatctactgtgccagttcagtcctcagcaggtcaccaccttc
cttaagatctctcaggactacagactggaggaggccatccagatcacagagaaacacaag
ctgcatgaggccacagcctacctgctggagaggaagggagatgtacagggagcttttgaa
gtgctgctacagaccctgaagggcaaactacacaaacttgccctagaaggctcagaggca
gacaagcccgacgatgaggaggaggaggaggagacgggcaatgaagtgcagagtctgtta
caaagagtggacgaagctctgcatgacatcattgctttgtgtcagaggagctcgcacggt
ctcaaccagcagcagagagaggctctgtggtttcctctcctcgaggcgatgatgtcacca
cagaaactactcaaaggtgccgatgccaaacacacttcagatgcactaaaagagctcact
atgaaagtcttaaacagcatgtccagttttattgcaccacctgccatcattcagcgcatc
ctacaggaccctgtatatgggaaaggaaagctggctgagatccaagggctcattttaggg
atgctagagaccttcaactatgaacagacattgttggagacaaccaccaatctgctgaac
tctgatcttcactggtctctgtcacatctccgtaaggcagtcagtaaagggcttcaccca
agacaggaccactgcaacatctgcttacagcagtacaaaagacgtcaggagagtgaggag
gagatcattatcttcagctgtgggcacctgtaccactgccagtgtcttcagcgtaaagag
gcaggtgttttgaacgagaggcagtactcatggagctgctacaaatgcacgtccaaccag
ggctcgcggccagcggacagacccagcgcagaaaactcccgaacacgctctgcttctctg
gcacagaccaaagtgacatctgctcatcgtgggaatgtggcagaggctcatgggagaaag
atgttgactgaagccactctggatgcccaacagacacaggcctgggatcagttccgcact
ctctacagaggaccatctaggcttgctgttctgacagaactcacccattctcatggcaat
gagagagccggtctgtcgaatcctgcccctccaggaaccggaagtatttatcacagcgag
aacttccagttaaagctttctcctccaccactggtggaggagtag
DBGET
integrated database retrieval system
