Chanodichthys erythropterus (predatory carp): 137032744
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Entry
137032744 CDS
T10334
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137032744 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137032744 (wdr33)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137032744 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
137032744
NCBI-ProteinID:
XP_067260775
LinkDB
All DBs
Position
12:complement(61387599..61406283)
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AA seq
1110 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGMLSNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGMEYDDIETNSVAAIPGMGIPEQLKAAMEQEQTGKEMAAEPEMSIPGLDWGMEE
VMLKDQKKPPTKKVPYAKPIPAQFQQAWAENKVPAMPPGEVPKERKDEKKVDGKKKTQAE
IEQEMAALQYTNPMLLEQLKIERMAQLQEQGMPPPAGQSGPVPPFPGQGGPMPPPTQGFP
QSMPLQQMPHNMPPVGPGGIPGPFIPPGQMGPPGPMHQGPPPQGMMGPPDMHGPPRHPGP
HRNMGPQGPPGMPPGPRGMQGPPLGGMPPGSVGSPGNMMGPPPRGQGPPQGGMMHQDMRG
PVPHGNMIGHQGPMPGSMMGPPPRTHGSMQGMGNMHGMGPPPGGMHGPQNNMQGPPGNMQ
GPPGNMQGLPPYLQGKPPHMGDGNRGQFNQGQNPGPQSMMHGMGQQGPNGKGDTPRGPPN
HHMGPPPERQGPGGPGQGSDGSQYWGDDGGYQEGWRRGPGGPGQEYSGGHRGSSGSQWEG
QERFSSHDGEYMGHDRYDGYEGSGEEFDQRQRRPPHGDDSYRRGGPSGRGGMGGFQDEYG
GDESFDSQEDMGQGWGGRGRPRGGPPRGGHESYRDGQRPDHSMHDSPSPASRERSSSLQG
MDMASLPPRKRPWHDGPGTGDMDSPGAVPDDRGTGRPSPRDEGGYGPPSRGGRGGWGRGG
PPNPSGPGPNVGPNARRGAQRGVMRGGRGR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatatcggctcacctccccggttcttccatatgcctcggttccagcaccag
gcacctcgtcagctgttctacaagaggccagactttgcccagcagcaggccatgcagcag
ctcacttttgatggcaagcgcatgaggaaagctgtcaaccgcaaaaccattgattataat
ccatctgtcatcagatatcttgagaatcgattgtggcagagagatcatcgagatttccgt
gctattcaaccagatgctggctgctacaatgatctcgttcctccagttggtatgcttagt
aaccctatgaatgctgttacgacaaagtttgtcagaacctccaccaacaaagttaaatgc
cctgtgtttgttgtgcgatggactcctgaaggcaggcgacttgtaactggtgcctccagc
ggagagtttactttatggaacgggctcacatttaactttgagacaattctgcaggctcat
gacagccctgtcagggcaatgacctggtctcacaatgacatgtggatgttgactgccgac
catggaggttacgtgaagtactggcagtccaacatgaataacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctctcctacggataataaatttgccacttgc
tctgatgatggaactgtacgcatctgggactttctgcgctgtcatgaggaaagaattctg
agaggtcatggagcagatgtgaagtgtgttgattggcatcccacaaagggcttggtggtg
tccggcagcaaagacagccagcaacctatcaaattttgggacccaaagactggacaaagt
ttggcaacactacatgcacataaaaacacagtcatggaggtgaagtggaacctcaatggc
aactggctgttgacagcgtcacgtgaccatttatgcaaactgtttgacatccgcaacctc
aaagaggagctacaggtttttagaggacacaagaaagaagccacagctgtagcctggcac
ccagttcatgaaggcctgtttgccagtggaggttctgatggatcgctgctattctggcat
gcaggtgtggagaaagaagtgggaggaatggagatggctcatgaaggaatgatctggagt
ttagcctggcatccactgggccacatcttgtgttctgggtctaatgaccacaccagcaaa
ttttggacaaggaatcggccaggggacaagatgcgggacagatacaatctgaacttgttg
cctggaatgtcagaagatgggatggaatatgatgacatagagaccaatagtgttgccgcc
attcctggcatggggatcccagaacaactgaaggctgctatggaacaagaacaaactgga
aaagagatggcagcagagcctgagatgagcatcccagggctggactggggaatggaagag
gtcatgctgaaggaccaaaaaaagcccccgactaagaaagttccctatgcaaaacccatt
ccagctcagtttcaacaggcctgggcagagaataaggttccagcaatgcctcctggagag
gttccaaaggaaaggaaggatgagaagaaagtagatggcaagaagaagacgcaagcagag
attgagcaggaaatggctgcccttcagtatacaaacccaatgttgcttgagcaactaaag
attgagcgaatggcacaattacaagaacagggaatgcctccccctgctggacagtcaggg
ccagtgccgccctttccaggtcagggtggtccgatgccccctccaacacaaggcttccct
caatccatgcctctacaacaaatgccgcacaacatgcctccagtgggaccaggtggaata
cctggtccattcattcctccaggccaaatgggtccacccggacctatgcaccagggtcct
cctccacagggcatgatgggacctccagacatgcatggacctccacgtcatcctggccct
cacaggaacatgggaccccagggtcctcctggcatgccgcctggccccagaggtatgcaa
ggacctcctcttggaggaatgcccccaggttctgttggatctccaggcaatatgatggga
ccaccaccgcgaggacaggggccgccacagggaggtatgatgcatcaggacatgaggggg
cctgtgcctcatggaaacatgataggccatcagggacccatgccagggagtatgatgggg
cctccacccaggactcatggcagtatgcagggcatgggaaatatgcatggtatggggcct
cctccagggggtatgcatggaccacaaaacaacatgcaagggccaccaggaaacatgcaa
ggacctccaggcaatatgcagggccttccaccatatttgcaaggcaaaccaccacatatg
ggtgatggaaaccgaggacagttcaaccagggacagaatcctgggcctcagtcaatgatg
catggaatgggacagcagggtcctaatgggaaaggagatactcctcgaggaccacctaac
caccacatgggacccccaccagagcgacaaggcccaggaggacctggtcagggctcagat
ggaagccagtactggggtgatgatgggggttatcaagagggctggagaagaggccctggg
ggtccaggacaggaatactctggaggtcacagaggaagctctggaagccagtgggagggc
caggaaaggttttcttcgcatgatggagagtacatgggacacgacaggtatgatgggtat
gagggttctggtgaggaatttgaccagaggcagagacggccaccacatggagatgattca
tatcggaggggtggcccaagtggacgtggtggaatggggggcttccaagatgagtatggc
ggagatgagagctttgattcccaagaagacatgggccaaggatggggaggtagaggaaga
ccgcgtggtgggccaccaagaggaggtcatgagagttatcgggatggtcagcggccagac
cacagtatgcatgacagtccttctccagccagtagagagcgttcttcctctctacaggga
atggatatggcctcgctgccaccacgcaaacggccatggcatgacggaccaggcactggt
gatatggactcccctggtgcagtgcccgatgacagaggcacaggtcgaccgtcaccaaga
gacgaaggtgggtatgggcctccatcacggggaggaagaggtggttggggacgtggtggg
ccgcctaacccaagtggtcctggtcccaatgtaggtccaaatgccaggcgaggggctcaa
cgcggcgttatgcgaggaggtcgtgggcggtag
DBGET
integrated database retrieval system
