Chanodichthys erythropterus (predatory carp): 137033582
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Entry
137033582 CDS
T10334
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137033582 (tnca)
04518 Integrin signaling
137033582 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137033582 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137033582 (tnca)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137033582 (tnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
DUF7949
hEGF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
137033582
NCBI-ProteinID:
XP_067261670
LinkDB
All DBs
Position
13:complement(49327213..49388573)
Genome browser
AA seq
2362 aa
AA seq
DB search
MWSGHLTVSCLVLATLMTLNQAGLVKKMIRHRREALTIPGMHNVTLPNSSRPVVFNHVYN
IKVPGSSLCSEDLESSGGLVLEEKVAPSVSKVTDHTLDSSNQIVFTHRINIPKQACACTD
GLPDLKELLSRLETLESELSTLRQQCGTESTCCSAQVSGIVGTKPYCSGHGNYSTETCGC
ICDPGWNGPNCTIPDCPGDCGDQGRCVNGKCQCFEGFTGEDCSLKACLVDCSENGRCVDG
LCVCNEGFSGEDCMESDCLNNCLGRGRCVDSECVCDEPWTGFDCSELICPNDCYDRGRCD
NGTCYCDKGFTGEDCGAFVCLNDCSGRGFCIDGRCICNAGYSGEDCSSLTCPNDCNQRGR
CFNGVCICDMGFHGEDCGKLSCPNNCNNRGRCIDGRCECDVGFQGHDCSELRCPNNCNNR
GRCVNGQCVCEEGFSAEDCSIKTCPSDCYGRGQCVDGKCVCFADFTGEDCSELSCPNNCL
NRGRCVAGQCVCDEGFTGEDCGQKKCPNDCLSRGRCVEGRCVCQEGFEGQDCSVPTCPGN
CNNRGRCVNGKCVCDEGFVGDACTERSCPNECNGAGQCVDGRCVCDEGYIGKDCSEVSPP
EDLTVTDVTTEKLNLTWRNEMLVTEFLVTYIPTSPGGLQLDFRVPGDRTSATVSELEPGI
EYLINVYAVLNNKRSVPVSARVATYLPQPEGLRFKSISDTSVEVLWDQLNFPFDGWELIF
RNTKEENGKIVNNLTPSETNFEQPGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPG
QIDVSDVTDRSAVISWSRPVAQIDGFRVSYGPSTDLLVHREVDLSAKDTQYSLEDLKPDT
EYRVSLSSRRGDVTSEPIFESFTTGLDAPSDLKAVDHTDNSITLEWKNSRSSIDGYRIKY
GPIAGGAHGEDMFPRKAGDTTWATITGLKPGTEYGIGVTAIQNERESEPATTNALTDLDP
PRDLEVRDSTETMLELVWKRPRAKISTYRLVFISADGRREEIELPATATTYILNGLTPGM
LYTVTLVAERGRRRSAPATITASTASFTFYLANTFPELGSAKGTDDNVISFVPLDNSESP
FSGSGYEDSTGTLTVSNVTSDGFDLTWESNIRIGYDSYTVELKDFSGKWNKEVHLHGEVN
GTKIRGLRASTEYQVRLYGISDNQRSSLLEAVAVTAPKSTSPDVVALTVKTVSTMKPSLH
KEVQPSVSTSTFLTEDVKAEASGDEFERPSQGPPSDLKVTNVSRTSLRLSWSAPEGAFDS
FIVELNSSSNKSKEHIIDVSGEARQVHVDGLTADMHYEITLYGMKESKKSQPVNVHIKTE
EQKPEIGSLSVSDVSWDSFNVSWTVEDGLAFDSFVIEVANSAGGPERQNLSVSGDARSLW
MSGLSPDTSYTITLYGVHQGSILGSIYIEEATDSAPVVGNLYVSNITSESFSISWNDTRG
DIERFILEIIDSSWQREPVEYNLSHSTQSYEITGLRPTTDYIAYLTGVIKGRRTDSVSAV
ASTAAEPDLSGLVVSNITSDTVSLSWRTGEKAFDNFIVEVRESALPTQATGRTLPTGARS
TVLTGLRGDTRYQIKLYATIGGANTAALTTVVTTEPKPELGPIVVSETLPSSLTLSWSTL
SGHFDGFAARITDREQLYDVVELRLSGTERNITVMGLVDSTVYDIVFYGLSHGRQTPSVY
FNTSTASLPKVENLTVSDITPYGFRVSWEADSSEGFSHFQVKVSDSGQLLEPQEFVVPGN
QTLLDVLGLITGIGYEVSVTGVSGNGLQSRPITTVAVTEAEPEIEHLFVSDVTPESFRLA
WTAEDDVFDRFVLKVRDSRKLSHPREFVVPGDERTKVLTQLLGGTEYEIELYGVTLEHRS
QPVTAVARTGLGAPRDLRFSDIMDTSAVVYWTGPHAQPDSYRITYLPVQGGTPMIVTVDG
SQSQVSLTNLIPGEMYQVSVIAVKGLEESEPVSDTFTTGLDTPRSLTAVNVTDTKALLLW
QPAVATVDGYVITYSADTVPPISEQVSGNIVEYEMSSLAPATQYTVNVYAIRNRQKSVPA
TTDFTTDADAPRDLVASNIQTESAVLTWKPPRAAITGYILTFEASDGDVRELNLDPSVTS
HALSDLRTTTEYTVRLQAVSEDKRSKSISTVFTTAGMVYSNAKDCSEALLNGETSSGPYT
IYIAGDEKQPVRVYCDMTTDGGGWMVFLRRQSGKVDFNRNWRNYSTGFGDTNDEFWLGLS
NLHKITTAGQYEIRVDLRDGQESVFAVYDKFSIGDPRSRYKIQIGSYSGTAGDSLSYHQN
RPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKGINWFHWKGHEHSI
PFAEMKIRPVNFRNLEGRRKRS
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaggacacctgactgtcagctgtttggttttggccaccctgatgactctgaat
caagccggccttgtaaagaagatgatcaggcaccgacgggaagctctgacaattcccggc
atgcacaacgttacccttccaaactcttcccgaccggtagttttcaaccatgtttacaac
atcaaagttccaggcagctctctgtgctcagaggatctggagtcttctggtggtttggtt
cttgaggagaaggttgcaccatctgtctcaaaagtaacagaccacacattggacagcagt
aatcagatcgtcttcactcatcgcatcaacattcccaagcaggcctgtgcctgtacagat
ggactgccggatctaaaggaactgctgagtcgattggagacgttggagagcgagttgtcc
acactcagacagcaatgcggcacagaatccacctgctgcagcgcacaggtctcaggcatt
gtaggaacgaagccctactgcagcggccatggaaactacagcacggaaacctgcggctgt
atttgtgaccccggatggaatggccccaactgtaccattcccgactgtcccggagactgc
ggcgaccagggccgctgcgttaacggaaagtgccagtgttttgaaggcttcacgggtgag
gactgcagcttgaaagcctgtctggttgactgcagtgagaacggccgttgcgttgatgga
ttgtgtgtttgcaatgaaggcttctctggggaagattgcatggagtcagattgcctcaac
aactgtttgggacgcggccgctgcgttgatagtgagtgcgtctgcgatgaaccctggacc
ggcttcgactgctccgagctcatctgcccgaatgattgctacgaccgcggacgatgcgac
aacgggacctgttactgtgacaaaggcttcaccggagaggattgcggggcgttcgtttgt
ctgaacgactgctcaggacgaggtttctgcatcgatggccgctgcatatgcaacgccggc
tactccggcgaggactgttccagcttgacctgtccaaacgactgcaaccaaaggggacgc
tgctttaacggagtgtgcatttgcgacatgggcttccacggagaggactgcgggaagctc
tcgtgcccgaacaactgtaacaaccgaggtcgctgcattgacggccgttgcgaatgcgac
gtcggcttccaaggccacgactgctcagagctcagatgccccaataactgcaataatcgg
gggcgttgtgttaacgggcagtgcgtttgcgaagagggtttcagcgccgaggactgcagc
atcaaaacctgcccgtcggactgttacggccgaggtcagtgcgtggacgggaagtgcgtt
tgctttgcagacttcaccggcgaagactgcagtgaattgagctgcccgaacaactgtctg
aaccgcggacgctgcgtcgcagggcagtgcgtttgcgacgaaggcttcaccggagaggac
tgcggtcaaaagaaatgtcccaatgactgtctcagccgaggacgctgcgtggagggccgc
tgtgtttgccaggagggttttgaaggccaggactgctccgttcccacctgcccaggaaac
tgcaacaaccgcgggcgctgcgtcaacggaaaatgtgtgtgcgacgagggattcgttgga
gatgcctgtacagaaagaagctgtccgaacgaatgcaatggagcaggccagtgtgtggac
ggccgctgcgtttgtgatgagggatacattggcaaggattgctcagaagtctcaccaccg
gaagacctgaccgtcacagatgtgaccacagagaagttgaacctcacatggaggaacgag
atgctggtgacggagtttttggtcacgtacatcccgacgtcaccaggcggcctgcagtta
gacttcagagtgcctggagatcggacgtctgctaccgtctctgagctggagcctggaatc
gagtacctgatcaatgtttatgccgtcctcaacaacaagaggagcgttccagtcagtgcc
agagtggccacatatctaccacagcctgagggcctgaggtttaaatccatctctgatacg
tctgtggaggttttgtgggaccagctgaactttccatttgacggctgggagctcatcttt
cgtaacacgaaggaagaaaacgggaagatcgtgaacaatctgacaccttccgagaccaac
tttgagcaaccaggactcgggccgggacaggaatatgaagtcactttgtccgtcataaag
aacaacaccagaggacccgaaacaagctccactgtagttacaagaatcgattctccagga
cagattgatgttagcgatgtgacagacaggtcagcagtgatctcctggtccaggcccgtg
gctcagattgatgggttcagggtttcgtatgggccaagtacagacctgttagtccatcgt
gaagtcgacctctcggccaaagacacgcagtacagcctggaagacctgaaacccgacact
gaatacagagtgtctctcagttctagaaggggagatgtgaccagcgagcccatctttgaa
agcttcaccacaggcctggatgcccccagtgaccttaaagctgttgatcatactgacaac
agcatcacattggaatggaaaaacagccgctcatccattgacggataccgtatcaagtac
ggcccaatcgcaggaggtgctcatggtgaagacatgttccctagaaaagcaggagacacg
acatgggccacaattacaggcctgaagcctggaacagagtacggcattggagtcacagcc
attcagaatgaaagagagagtgagccggccaccaccaatgcactgacagatctggatcca
ccacgagacctggaagtgcgagactccactgaaaccatgctggaactggtctggaagagg
cccagggccaagatctccacctacaggctagtgtttatctctgccgacggccgacgggaa
gaaatcgagctgcctgctactgcaaccacctacattctgaacggcttgactcctggcatg
ctctacaccgtcaccctcgtggcagaacgcggacggagaagaagtgctccagccaccata
accgcatccacagcatctttcactttttatctagcgaacacatttcctgagctcggttca
gccaaaggcaccgacgacaatgtcattagctttgtgcctcttgacaactcagagagcccg
ttctctgggagcggatacgaggattcaaccggcaccttgaccgtgtctaatgtcacatcc
gacggatttgatcttacgtgggagtcaaatatacgcattggctatgatagttacactgta
gaacttaaagatttctcagggaaatggaacaaagaggttcatctccatggggaggtgaat
ggcactaaaatccgtggtctaagggcttccactgagtaccaagtaaggctttatggaata
tccgataaccaaagatcttcactactagaagcagttgcagttacagcaccaaagtctacc
tcgcctgatgttgttgctttgaccgtcaaaactgtttcgacaatgaaaccaagcctccat
aaggaggttcagccatcagtctctacctccacttttttaacagaagatgttaaagctgaa
gcctcaggtgatgaatttgagcgcccaagtcaagggcctccaagtgacctaaaagtcaca
aatgtaagcagaactagtttgaggctatcatggtcagctccagaaggagccttcgatagc
ttcatcgttgagctgaactcatcttcgaataagtctaaagagcacattattgacgtatct
ggagaagccaggcaggtccatgtagatgggctgaccgctgacatgcattatgagattact
ttgtatggaatgaaggagagcaaaaaatctcaaccagtcaatgttcacatcaagacagag
gagcagaagccggagattggcagtctgagtgtgtctgatgtatcttgggatagtttcaat
gtgtcctggaccgttgaggatggccttgcctttgacagttttgtgattgaagttgcaaat
tcagcaggtggtcctgaaagacagaacctttcggtatctggtgatgcacgtagtttatgg
atgtctgggctgagtcccgacacgtcctatacaattacactatatggagtgcatcagggc
tcgatcctggggtcgatctacattgaagaagctacagatagcgctccagtggttggcaat
ctgtatgtgtctaatattacatcagagagcttctccatttcatggaatgacacgagagga
gatattgagaggtttatcctggagattatagactctagctggcagcgggagccagttgaa
tataacctatcacacagtacacagtcatatgaaatcactgggctacggccgactactgac
tatatagcttacctcactggagtaataaagggaaggagaacagactccgtcagtgctgtc
gcctccacagcggccgagcctgacttgtctgggctagttgtttcaaacattacctcagac
acagtgtcgctctcctggcggacgggagagaaggcgtttgataattttatagtcgaggtg
agagagtctgctttgcccacgcaggcgacggggcgcaccttgcccacaggtgcccgctcc
acggtgctgaccggcctcagaggagacacgcgatatcagatcaagctgtatgccaccatt
ggtggcgccaacacagctgccctgacaactgtagtaaccacagagcctaagcctgaattg
ggccccattgtggtgtctgaaacactgccgagtagcttgacgctgtcctggagcacattg
tcaggccactttgatggctttgctgctcgtatcactgaccgtgagcagctatatgatgtt
gtagagctcaggctatcaggcacagagaggaacattaccgtgatgggtcttgtggactct
acggtctatgacatagtgttttatggtctgtctcatggccgtcaaactccatcagtttac
ttcaataccagtacagcgtcattacctaaagtggaaaacctcacggtttcggatattacc
ccatacggatttcgggtgtcctgggaagcagattcctctgagggcttcagccattttcag
gtaaaggtgtcggactctggccagctgctggagccacaagagttcgtagtgccaggaaac
cagaccttactggatgttttgggcctgattactggcattggctatgaggtcagtgtgacc
ggggtgtcagggaatgggttacagtctcgtccaatcaccacagtggctgttacagaggca
gaaccagagattgagcaccttttcgtgtcggacgtcacccctgagagtttccggctggcc
tggactgcagaagacgacgtttttgatcgatttgtgctcaaagttagagattcgagaaag
ctctcccatccacgagagtttgttgtgccgggtgatgaaagaaccaaagtgttaacacag
cttttggggggaactgaatatgaaattgagctttacggtgtcacgttggaacatcgctcc
caacccgttactgctgttgcgagaacaggccttggagctccacgcgaccttcgtttctct
gacatcatggatacatcagctgtggtttactggactggaccacatgcccaaccggactcc
tacagaatcacttacctcccagtccaaggaggtactcccatgatcgtgacggtggacggg
tcacaatctcaagtttcgctaacaaacctgattcctggagagatgtatcaggtgtcagtt
attgcagtgaaaggtctggaggagagcgaaccagtgtccgacacttttactacaggtctg
gatacgccacgcagcctgacagctgtcaatgtcactgacacgaaggcgctgttgctgtgg
caacctgcagttgcgactgtggatggatatgtcatcacatacagcgcagacactgtgcca
ccgatatcagagcaggtttctggcaacattgttgagtatgagatgagttcactggctcca
gcaactcaatacacagtcaatgtttatgccataagaaaccgacagaaaagtgttccagcg
accacagacttcacaacagatgcggatgctccgcgtgatctggttgccagtaatattcag
acagaaagcgcagttctcacctggaagccaccccgggcagccatcaccggctatatactg
acctttgaagcatctgacggggatgtcagggaattgaatctagacccatctgtcacctca
cacgctctgtctgatctgagaaccaccacagaatacactgtcagactgcaggccgtctct
gaggacaagaggagcaagagtatcagcaccgtcttcaccactgctggcatggtctacagc
aatgccaaggactgctcagaagctctgctgaacggagagacgtcatccggtccgtacacc
atttacatagccggagatgagaaacaaccggtccgggtctactgcgacatgaccactgac
ggcggaggctggatggtgttcctacggcgtcagagcggcaaggtcgattttaacaggaac
tggaggaactactctacaggatttggtgacacgaacgatgagttttggctcggactgtcg
aatcttcacaaaatcacaacagctggtcagtatgagatacgtgtggacctgcgtgatgga
caagagagtgtgtttgctgtgtacgataaattttccatcggagaccctcgttctcgctac
aagatccagattggttcatacagtggtactgcaggcgattccttatcgtatcaccagaac
agacccttctccacttatgacaatgacaatgacattgccgtcaccaactgtgccctctcc
tacaagggagcgttctggtataaaaactgccatcgagtgaatctgatggggaaatatgga
gacagcagtcacagcaaaggcatcaattggttccactggaaaggccacgagcattcgatt
ccatttgcggagatgaagatccggccagtaaatttcagaaacttggaaggcagacggaaa
agatcatag
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