Chanodichthys erythropterus (predatory carp): 137033908
Help
Entry
137033908 CDS
T10334
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137033908 (lrsam1)
04121 Ubiquitin system [BR:
cery04121
]
137033908 (lrsam1)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137033908 (lrsam1)
Membrane trafficking [BR:
cery04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
137033908 (lrsam1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137033908 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
zf-C3HC4_3
LRR_1
LRR_4
SAM_1
Prok-RING_4
SAM_2
zf-RING_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
137033908
NCBI-ProteinID:
XP_067262473
LinkDB
All DBs
Position
13:27881832..27896805
Genome browser
AA seq
721 aa
AA seq
DB search
MFLFSKKKKPSEDSKKRLEYQLCLAKEAGADDILDISACELTEVPSSAFSICKVLQKKVL
ILHGNDLRSLVPKGCCTGALATLKVLDLHENKLTSLPDDIGQLLSLQVLNVEKNHIKQLP
DSIGDLRHLQTLNVKGNCLTVIPVSVGHMSSLRTLDISENSIRELPKELASVRTLESLIL
DAQDMSYPPASVCMGGTEEVQRYLCSEMGLDYCPPSQYLLPVLEHDEGKQEVDCVDGEEM
AWQSKFMDYEKRKEQKQLEKLNFEKVLEEKQREQTQLLLLNNSRKEDILLSVKLEQERLE
LGVSQQQKAQEAERLKMLDKVRQAESAVMGRISDLLLDNKRQAKSAEFLQALEEDRIRME
HLTAITQEEANSLRKKEVAGAMQRMLSESCYLRLLQEAREAKTQILVSETCRSLDSLDKK
FDQVLSLQQLDKSKAISQILQEEEMQKAAFEALQLQKDSVHAYIRNQIKLIEAELLQLTK
LEVKRRNLDTENLQEVLADQRTALTDLLQQLLKQKDQREEELRLVLMELEQKSESNQQNY
WMIQYQRLLDAKPLSLRMQEAAVDRDLGNMLCKLSAQHYLPIIAHHRITAEALRHMTAKD
LRKLGINEVGVQKALLHWARERTLSDPLPKTAKEIQEAGPSTPSAPLQPQLTPPLTPNTP
LTPTAPDRFSNSECVVCMERESHVIFLPCGHVCCCQTCSDALQSCPLCRASVSQRVRLYH
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctccaaaaagaagaaacccagtgaagattccaagaaacgacttgagtac
cagctttgcttggccaaagaagcaggtgctgatgatattctggacatttctgcctgtgag
cttactgaggttccctccagtgccttctcaatatgtaaagtgctccagaagaaagtgtta
attcttcatggaaatgacctgaggtcacttgttcctaaaggttgctgcactggtgcctta
gcaactttaaaggtgttggatctgcatgaaaataagctcacatcacttcctgatgatatc
gggcagcttttgtccttgcaggttctgaatgtagagaagaaccacataaaacagctacca
gactctataggggatctacgacatctacagacacttaatgtgaaagggaactgccttact
gtgattcctgtgtctgtgggtcacatgagcagcctgcgtacactggacataagtgagaac
agcatcagagaattacccaaagaactggccagtgttcgcactctagaaagcctgatcctg
gatgcacaggatatgagctatccacctgcgtctgtgtgcatgggcggcacagaggaagtg
cagcgctacctctgctcagagatgggtctggattattgccctccatcccagtatcttctg
cctgtgctggagcacgatgaagggaagcaggaggtggattgtgttgatggtgaggagatg
gcctggcagagcaaattcatggactatgagaaaagaaaggagcagaaacagctggaaaag
ttgaactttgagaaagttcttgaagagaaacagagagaacagactcagcttcttctcctc
aacaactcccgcaaagaagacatcctgctgtctgtcaaattggagcaggaacggttggag
ttaggtgtttctcagcaacagaaggcccaggaagcagagaggctgaaaatgctggataaa
gtacgtcaggcagagagcgctgtcatgggccgcatctctgacctcctgcttgataacaaa
cgccaggcaaagagtgctgaatttctgcaagctctggaggaggatcgcatacgaatggag
caccttactgccatcacgcaggaagaagccaactctcttaggaagaaggaagttgcaggt
gccatgcagaggatgctgtcagagagctgctatttaaggttactgcaggaggccagggaa
gccaagacacagattctggtgtctgagacctgcaggagtttggacagtttggataagaag
tttgaccaagtgttgtccctgcagcagctagacaaaagcaaagccattagtcagatcctt
caagaggaggaaatgcagaaggccgcctttgaagccctccagcttcagaaggacagtgtg
cacgcttatatccgtaatcagattaaactcatagaggcagagttattgcagttgacaaag
ctggaggttaagaggaggaatttggacactgagaacctgcaggaggtgctggctgaccag
aggaccgctttgactgacctactgcagcagttactcaaacagaaagatcagagggaggaa
gagctcaggctggtcttgatggagctggaacagaagagtgaatccaatcagcagaactac
tggatgattcaatatcagaggctcctggatgctaaaccgctgtctttgcgtatgcaggaa
gcagctgtggatagggatctggggaatatgctgtgtaaactctctgctcaacactacctg
ccaatcatagctcaccaccgaatcactgctgaggccttgcgacacatgaccgccaaagac
cttaggaagttgggcatcaatgaggttggcgtgcagaaagctcttctccactgggccaga
gaacgcactctgtctgacccattgcctaaaacagcgaaagagatacaggaagctggtcca
tctactccaagtgccccacttcaaccgcagctcactcctccactgacccccaacacccct
ctgacccccactgcccctgatagattcagcaattccgagtgtgtggtgtgcatggaacgt
gagtcacatgtgatcttcttgccgtgtggacacgtatgctgttgccagacctgcagcgat
gccctgcagtcctgccctctgtgccgtgcttctgtatctcagcgtgtccgtctttaccat
ggctga
DBGET
integrated database retrieval system
