Chanodichthys erythropterus (predatory carp): 137033912
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Entry
137033912 CDS
T10334
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137033912 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
CCDC138_C
Motif
Other DBs
NCBI-GeneID:
137033912
NCBI-ProteinID:
XP_067262484
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Position
13:complement(7303782..7319711)
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AA seq
721 aa
AA seq
DB search
MASFAGDRWREALKNHDIFNKLQERLHLEPQGTSRRIAKNLTFCLNGDLFIWDSVESVFY
TTNLRQLNTDGDTDTSKFQTLLCINPPLFEVCQVLVSPTQYHVALIGQRGATILELPQRW
GKRSEFEGGRIQINCKTIPVAERFFTSSASVTLRQAAWYPSETEEPHLVLLTSDNTMRFY
NLKEPQSPAKVLSVSQLDEDSSVHTRGRSYAASLGETAVAFDFGPLADSPRLSSLRVKAE
LLVYPLYILYGNGETFLSYISLTHSISNLGKPMGPLPMYPAAEDNYGYDACAVLCLPCVP
NILVIATESGMLYHCVVLEAEEDEDGGAVERWSRGSETVPSLYVFECVELELTLKLPAGG
EEEDIIESDFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLTWFKKLHKFLESDEEDKDSLQ
ELAAEQRCIVEHILCTRPLSNSLPAPVRGFWIVSDLSLGATMICITSTYECLLLPLLSSI
RPPSPPLLCSHPGAGSDSSPLRGLAEDSFEQHIRNILARSSTNPLMLRSGDKDSSPPPSE
CLQLLSRATQVFREEYILKMGLAHEEMQRRVKLLTGQKNKQLEDLALCREERKSLTEAAE
RLADKYEDAKYRQEAIMNRVKQVLGSLRSQLPVLSDSERDMRKELQTIHDQLRHLDNGIK
QVNMKKEYQKKQMNTGASPARSSFTLNAHQRKCVQGVLKEQGEHIAGMMKQIKDIKNHFS
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttgcgggagatcgctggagggaagcgcttaagaaccacgatatcttcaat
aaattacaagagaggcttcatttagaaccacagggcactagcagaagaatagccaagaac
cttacgttttgtctgaacggcgacctttttatatgggacagtgttgagagtgtgttttac
accacaaacctgcgacagctgaacactgacggcgacacagacacttctaaatttcagact
ctgctgtgcatcaacccgccgctgtttgaagtgtgtcaggttctcgtcagccctacacag
tatcatgtggctctcatcggtcagcgtggagcgactatactggagctgccgcagcgctgg
ggcaagaggtcagagtttgagggcggacgcatccagatcaactgcaagacgattcccgtg
gctgaacgcttcttcaccagttctgcttctgtgacactccgacaagctgcctggtatccc
agtgaaactgaggagcctcatctagttttactgacctcagataacaccatgagattttat
aatctgaaggagccgcaatcccctgccaaagttttatctgtgtctcagttggatgaggac
agcagtgttcatacaagagggcgttcctatgcagcgtctctgggagagacggctgtggcg
tttgacttcggaccgctggcggattctcctcgtctgagcagtttgcgtgtgaaggcggag
ctgctggtgtatccactgtacatactatacgggaatggagaaacatttttgagctatatc
tctctcacacacagtatcagtaatttagggaaaccgatgggcccattacccatgtaccct
gcggcagaggacaactacggctatgatgcgtgtgctgtgctctgcctgccttgtgtgccc
aacatcctggttattgccaccgaatcaggaatgctgtaccactgtgttgtgctggaggca
gaggaagacgaggatggcggagctgtagagagatggtccagaggttcagagaccgtgcct
tcactttatgtgtttgagtgtgtggagctggaactgacactcaaactgcctgctggaggg
gaggaggaggacattatagagtcagacttcacctgtccaatcagattacaccgagatcct
ctgtgtcagcacaggtatcactgcacccatgaggccggtgtgcacagtgtaggactcacc
tggttcaaaaaactgcacaagtttctggagtctgatgaggaggataaagacagtctgcag
gagctggcagcagaacaacgctgcatagtggagcacatcctgtgtaccagacctctctct
aacagtttgccggctcctgttcgtgggttttggatagtgtcagacctgtcccttggagcc
accatgatctgcatcacgagtacctacgagtgtcttctgctccctcttctaagctccatt
cgtcccccgtcccctccgttgctctgctcccatccaggggcggggtcagacagctctcct
ctgcgtggattggctgaagactcttttgaacagcatattcgtaacatcctggcacgcagc
tcgaccaatccattaatgctgagatcaggggataaggactcgtcccctcctccttcagaa
tgtctgcagctgctgagtagagccacacaggtgttcagagaggaatatatcctaaaaatg
ggcctggctcatgaagaaatgcagagaagagtaaagctcctgactggacagaagaataag
cagctggaggatcttgctctttgtagagaggagaggaaaagcctgacggaggccgcagag
cgactggctgataaatatgaagatgccaagtaccgtcaggaagccattatgaacagagta
aaacaggttttgggaagtctgcgcagtcaacttcctgtgctgtcagatagtgagagagac
atgaggaaggaactgcaaactatccacgatcagctccgtcaccttgacaatggcattaaa
caggtgaacatgaagaaagaatatcagaagaagcagatgaatactggagcatctccagct
cgctctagcttcacactcaatgcccaccagaggaagtgtgtccagggagtgctgaaagaa
cagggagagcacatcgctggaatgatgaagcagatcaaggacatcaaaaaccatttcagt
ttctga
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