| Entry |
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| Symbol |
lig3
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| Name |
(RefSeq) DNA ligase 3 isoform X1
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| KO |
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| Organism |
cery Chanodichthys erythropterus (predatory carp)
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| Pathway |
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| Brite |
Enzymes [BR:cery01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
137034218 (lig3)
DNA repair and recombination proteins [BR:cery03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
137034218 (lig3)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
13:8533979..8549796
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| AA seq |
1025 aa
MPSFCFGRLVRTISRPSLPTLFRETVFRATLNHQNLQCSRALTFTWGFVSSPSGIFFCVP
QFRQFTLSSGSYFHISWPEWQREQPDMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRIGK
IVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITELEGWEELQDEDKDLINKHV
SELAAKTNATPKKKVQAKLNNSGQLSAPQADPTVNAPRKFSGFTATKAGSSSSSPGPSPA
KPTQGSALSAQLCDPNHKDNLLREFRKLCALVAEKSGYNAKTEIIRDFLAKGSGGDACCL
GTQSFKTVLRDKFRGDLYLTVKLLLPGVVKNVYNLNDKQIVKLFSRILNCNQDEMVQDLE
QGDVSETVRMFFEDSKSFPPAAKSLLTIQEVDASLSRLSQLTKEDDQQAELQDIAKKCTG
NDLKCYIRLVKHDLKINSGAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQQEASNGSG
PRKILSVEASLMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDHFSYF
SRSLKPVLPHKVAHFKEFIPKAFPGGHSMILDAEVLLIDTRSSKPLPFGTLGVHKKAAFQ
DAQVGLFVFDCIYFNGVSLMDKPLCERRKFLHDNMVEVPNRILFSEMKHVTRAADLAEMI
TRVIREGLEGLVLKDIKGHYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGG
IMSSFLMGCYDPESRKWCTVTKCSGGYDDATLARLQKELDVIKIGKDPSKIPGWLKIVKN
YYPDFIIRDPEKAPVWEITGAEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNLQQLK
ELYRISKENCDFEVTAGPSKTSQNDKSSSGGESGGSSPSASHGASSAKTKNGHTPKAKAV
KTESSSPAVKRKLPTEKQDAKKIKTEPAHSNGQSKLKTIQTTDPKNEKTLLDIFTGVKLY
LPESVQDFEKLRRYFLAYDGDLVPEYDSSSATHTLEKPEDDSSAHRVTSNWIWECIRKRR
VVPPC |
|---|
| NT seq |
3078 nt +upstreamnt +downstreamnt
atgcccagtttttgttttggcagactagtgaggacaataagtagaccatctttgccaaca
ctttttagggaaactgtattcagagcaacactaaatcatcaaaatctccagtgctcgagg
gctcttacatttacgtggggctttgtatctagccccagtggcatctttttctgtgtgcca
caatttcgacagtttactctcagctccggctcttatttccacatttcttggcctgagtgg
caacgtgaacaaccagacatggcagagcaaaggtactgcgtggaatatgccaaacgtggc
actgcggggtgcaagaaatgcaaagacaagatcatgaaggggctggtccggattggcaag
attgtgccaaacccgttcagtgagtctgcaggggaaatgaaggagtggtaccatgtaaag
tgcatctttgagaagctggagagagcgcgtgccaccacaaagaaaatcgaggacatcacg
gagctggagggatgggaggaacttcaagatgaggataaagatctaatcaataaacatgtt
tcagaactggcagccaaaaccaatgcaaccccaaagaagaaagtgcaagcaaagttaaac
aacagtgggcagctgtcagcaccgcaagctgatccaacagtcaacgctcctcgcaagttt
tctggcttcacagctaccaaggctggttcctcttcctccagtcctggaccgtctccagcc
aaacccactcagggcagtgctttatcagctcagctatgtgaccccaaccataaagacaac
ttactgcgggagttccgcaaactctgtgccttagtcgcagagaagtcaggctacaacgcc
aagacagagatcatcagagacttcttagcaaaaggctctggtggagatgcctgctgtttg
ggaacgcagtcgtttaagaccgttctgagagacaaattcagaggagatttatacctgaca
gtgaagcttctcctcccaggagtggtgaagaatgtgtacaacctcaatgacaaacaaatt
gtcaaacttttcagccgtatattgaattgcaatcaggatgagatggtgcaagacttggaa
cagggagatgtttcagagacagtgcggatgtttttcgaggacagcaagtctttccctcca
gcagccaagagtcttttgaccatccaggaagtggatgcttcactgagccgtctatcccag
ctcacaaaggaggatgatcagcaggcagagctgcaggacattgctaaaaaatgtaccggt
aatgatctgaagtgctacattcgtttggtcaaacatgatctgaaaatcaactcaggggca
aagcatgttttggatgctgtggacccgaacgcatatgatgccttcaaagcctcccgtaac
cttggtgacgtaatcgacagggtgctacggaaccagcaggaagcctctaatggatcaggg
ccccgaaagatccttagcgtggaggcgtctctgatgacccctgtacagccaatgctggca
gaagcatgcaagtccattgagtatgccatgaagaagtgtcctaatgggatgtactctgag
atcaagtatgatggtgagcgtgtgcaggtccataagaacggcgatcacttcagttacttc
agtcgaagtctcaaaccagtacttccccacaaggttgctcattttaaagagttcatacca
aaggcatttcctggtggtcatagcatgatccttgatgctgaagttcttcttattgacaca
aggtctagcaaaccactgccttttgggactcttggagtacacaagaaagcagctttccag
gatgctcaagtgggtctgtttgtgttcgactgcatttattttaacggtgtcagtctcatg
gacaaacctctctgtgaaagaagaaagtttctccatgacaatatggtggaagttcctaac
aggattctgttctcagaaatgaagcatgtcacgagagctgctgacctggcagaaatgatc
acacgtgtcatcagggagggactggaggggttggttctgaaggatatcaaggggcattat
gaaccaggaaagcgtcactggttgaaggtgaagaaggactatctgaatgaaggagcaatg
gcggacactgctgaccttgtggtgcttggagctttctatggcaaaggctcaaatggtgga
attatgtccagtttcctcatgggctgctatgaccctgaatccaggaagtggtgcactgtg
accaagtgttcaggaggctatgacgacgccacgttagccagactgcagaaggagctggac
gttatcaaaataggcaaggatccaagcaagatcccaggatggttgaagattgtcaagaac
tattacccggatttcattatccgtgatccagaaaaagcgccagtgtgggaaataacagga
gcagagttttccaaatcagaaatgcacactgcagatggcatatccatccgcttcccacga
tgcactagaatgcgtgacgacaaggactggaagacagccactaaccttcagcagctcaag
gagctgtatcgtatctcgaaggaaaactgtgattttgaggtaacagctggtccgtccaaa
actagccaaaatgacaagagctcctcaggaggtgagagtggaggaagctctccctcagca
tctcatggagcttcctcagctaagactaaaaatggtcataccccaaaagcaaaggcagtg
aaaacagaatcatcctctccagcagttaagaggaaactacccactgagaaacaagatgcc
aagaagataaaaacagaacctgctcacagcaatggacaaagtaaattgaagaccattcaa
acaaccgacccaaagaatgaaaagacactactggacattttcacaggcgtgaagctctac
ctcccagagtcggtacaggactttgagaagcttcgccgttacttcctagcgtacgatgga
gatctggtgcctgagtatgactccagttcagccacgcatacgctggagaagccagaggac
gacagttcagcccatagggtcacctccaactggatctgggaatgcatccgaaagaggagg
gtggttcccccttgctga |
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