| Entry |
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| Symbol |
ddx54
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| Name |
(RefSeq) ATP-dependent RNA helicase DDX54
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| KO |
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| Organism |
cery Chanodichthys erythropterus (predatory carp)
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| Brite |
KEGG Orthology (KO) [BR:cery00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:cery03009]
137034508 (ddx54)
Enzymes [BR:cery01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137034508 (ddx54)
Ribosome biogenesis [BR:cery03009]
Eukaryotic type
Pre-60S particles
Helicases
137034508 (ddx54)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:13019773..13033572
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| AA seq |
850 aa
MAQRRKKLMKRKKSSAHRDHELQSDDEEFEVAAGIKDDDDTPNRRLLRFPATSECVSDVE
PDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA
MARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTA
LILGGDSMDDQFAALHENPDIIIGTPGRLMHVIQEMNLKLQGVEYVVFDEADRLFEMGFA
EQLQEIIRRLPDARQTLLFSATLPKLIVDFARAGLTEPVLIRLDVDTKLSDQLKLSFFHV
RLDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLTVEGIEVAYIYSALDQTARK
INIGRFVHRKAMVLLVTDVAARGIDIPLLDNVINFNFPSKAKLFLHRVGRVARAGRGGTA
FSLVCSDEVPFLYDLHLFLGRPVQVAVPEHTQDADGVFGRVPQSILDDEESQLQTAHENS
LDLQSLRHVSENAYKQYLKSRPSPSPESVKRVKNTDLSSMSVHPLLGAGLERMELDRLLM
VDCIKGYKAKATIFEINSNNKTNASEVMRAKRSRDARLVQKYSKARADLIVKPAVPVVIR
TEQQHNEDEDEIQTVFSEVVGGKKRKQDNETDGMKSKKKSLSGKDEEFYIPYRPKDFDSE
RGLSLGAEGSSFEQQASSAVLDLMGDESHSLNQHKSLMKWDRKRKRFVRETGKDGMNKKI
RTESGQVVTGKKKKKSFYEEWKKKYKMDDRASDSDGETGGALRGRNFGGRRGRGGAQAQP
AQQRNGSQVRSELKNRDQILKQRKRKAKQQFLQSGGMKKLRAKGKQRLQEVMRSGFGRGG
HKKGKMRKKL |
|---|
| NT seq |
2553 nt +upstreamnt +downstreamnt
atggcccaaaggaggaagaagctgatgaagaggaagaagagctccgcgcacagagatcac
gagctccagtctgacgatgaagagtttgaagtggctgcaggaatcaaagatgacgatgac
acacccaacagaaggcttctgcgtttccccgccacatccgagtgtgtttctgacgtggag
cctgacaccagagagctcgtcagagctcagaacaagaagaagaagaagtctggtggcttt
cagtccatgggtctcagttaccctgtgtttaaaggcgtcatgaagaagggctataaagtg
cccacacccatccagagaaagactatcccagtgatcctggatggaaaggatgtggtggcc
atggcgcggacgggcagcgggaagacggcggcgttcctcgtgcccatgttcgagaagctg
aaggccccgcaggcgcagacgggagcccgggctctgatcctcacacccacccgagaactc
gccctgcagaccatgaagttcaccaaagagctggggaagttcactgggctgaaaacggcg
ctcattctcggtggagacagcatggacgaccagtttgctgctcttcatgaaaatcccgac
atcatcatcgggacccccggccgtctgatgcatgtcatccaggagatgaacctgaagctg
cagggcgtggagtatgtggtgtttgatgaagccgacaggctgtttgaaatgggttttgca
gagcagcttcaggaaatcatccgacgtcttccggacgctcggcagacgctgctgttctcc
gccacgctgcccaaactgatcgtggatttcgccagagctggcctcacagagccggttctc
attcgtctggatgtggacacgaaactcagtgaccagctgaagctctcatttttccatgtg
cggttggacgataaaccagcgctgcttctgcatctgctgagaaacgtagtgaagccgcag
gaacagacggtggtgttcgtagccaccaaacatcacgtggagtatcttaaagagctcttg
acagtggagggcattgaggttgcgtacatctacagcgctctggaccagacggcccgcaag
atcaacattggccgcttcgttcaccgcaaggccatggtgctgctggtcactgacgtggcc
gcccgcggcattgacatcccgctcttagacaacgtcatcaacttcaacttcccatcgaag
gccaaactctttctgcacagagtcggtcgcgtggctcgcgctggcagaggcggcacagcg
ttcagtctggtgtgttcagatgaagtgcctttcctctatgaccttcatctgttcttgggt
cgacccgtacaggtcgccgtccccgaacacactcaagatgcggatggcgtattcgggcgt
gttcctcagagcattctggacgatgaagagtcgcagctgcagacggctcacgagaactcg
ctggatctccagagtctccgccacgtctcggagaatgcctataagcagtacctgaagtct
cgacccagcccctcgcccgagtctgtcaaacgcgtgaagaacaccgacctgtcctcgatg
tctgtccaccctctgctgggtgctggactggagcggatggagctggaccggctgctgatg
gtcgactgcatcaagggctacaaggcaaaagctactatttttgaaatcaactccaacaac
aaaacgaatgccagcgaggtgatgcgagccaagcgatctcgggatgctcgcttggtccaa
aagtattcgaaagcacgagcagatctgatagtcaagcctgccgtacccgtcgtaatcagg
accgaacagcagcacaatgaggacgaagacgagattcagaccgtgttctcagaggtggtt
ggagggaaaaaacgaaagcaagataatgaaacggatggaatgaagagcaaaaagaaaagc
ctgtcaggcaaagatgaagagttttacatcccgtatagacccaaagacttcgattcggag
cgagggctgagtctcggggccgaaggcagctctttcgagcagcaggcctcctctgcggtt
ctggacctgatgggagacgagagccactctttaaaccagcacaagagcctgatgaaatgg
gatcgcaagaggaaacgcttcgtccgtgagacgggcaaagacggcatgaacaagaaaatc
aggaccgaaagtggacaggtggtcactggcaaaaagaagaaaaagagcttttatgaagaa
tggaagaagaagtataagatggatgacagagcatcagactcagatggagaaaccggagga
gcgctcagagggaggaacttcggtggtcgtagaggaagaggcggagctcaggcccagccg
gcccagcagcggaacgggtcccaggtgcgatcagagctgaagaaccgcgatcagatcctc
aagcaacgcaagcggaaagccaaacagcagtttctgcagagcggcggcatgaagaagctt
cgcgccaaaggaaaacagcggctgcaggaagtgatgagatctggctttggtcgtggtggc
cacaagaaaggaaagatgaggaagaaactttaa |
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