Chanodichthys erythropterus (predatory carp): 137034707
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Entry
137034707 CDS
T10334
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03030
DNA replication
cery03410
Base excision repair
cery03420
Nucleotide excision repair
cery03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137034707 (rfc5)
03410 Base excision repair
137034707 (rfc5)
03420 Nucleotide excision repair
137034707 (rfc5)
03430 Mismatch repair
137034707 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cery03032
]
137034707 (rfc5)
03036 Chromosome and associated proteins [BR:
cery03036
]
137034707 (rfc5)
03400 DNA repair and recombination proteins [BR:
cery03400
]
137034707 (rfc5)
DNA replication proteins [BR:
cery03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137034707 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
137034707 (rfc5)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137034707 (rfc5)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137034707 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
137034707 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
AAA_lid_RFC1
RuvB_N
ResIII
AAA_24
DEAD
AAA_assoc_2
AAA_16
DUF815
PhoH
nSTAND_NTPase5
AAA_7
ATPase_2
TIP49
AAA_5
AAA_19
AAA_30
nSTAND3
TniB
AAA_2
DNAX_ATPase_lid
Thioredoxin_6
bpMoxR
Motif
Other DBs
NCBI-GeneID:
137034707
NCBI-ProteinID:
XP_067263943
LinkDB
All DBs
Position
13:21024127..21034750
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AA seq
334 aa
AA seq
DB search
MASTSKAQLQARNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQSQMIPRL
EHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEEMVYTCTGHPLRSD
IANILDWALNKDFTTAYNQILQLKTLKGLALHDILTEVHLLIHRVDFPPSIRMGLLIKLA
DIEYRLASGTNEKIQLSSMIAAFQAVRDIVVSDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagtaaagcacaacttcaggcgagaaatttaccatgggttgaaaagtac
aggccacagacattagatgatctcatctctcaccaagatatcctgagcacaatccagaag
ttcatcagtgaagaccgattgcctcatctgctcttctatggacctccaggaacaggaaag
acctctactatactagcatgtgctaaacagctgtacaaagataaagagttcaactcgatg
gttctggagctcaatgcatcagacgaccgtggcattgacgtggtgagggggccgatcctc
agctttgccagtacacgaaccatcttcaaaaaaggctttaagttggtgatcctggacgag
gcggatgctatgacccaggatgcacagaatgctttgaggagagtcattgagaagttcaca
gagaacacacgtttctgtctgatctgtaactacctttcaaagatcatacctgccctgcag
tctcgatgcacacggtttcgtttcggccccctgtcccagagccagatgattcccagacta
gagcatgtgatacagcaggagagcattgacatcactccagatggcatgaaggccattgtg
accctctcaacaggagacatgagacgatcactaaacattttacagagtacccatatggcc
tatgggaaggtgactgaggagatggtgtacacctgcactggacatcctcttagatcagac
atcgccaatatactggactgggccctcaataaagacttcaccactgcgtataaccaaatt
ctgcagctcaaaactctgaaaggtctggcacttcatgacattttaactgaagtccatctt
ctcattcaccgtgtggatttcccaccctctatccgcatgggtttgcttataaaacttgca
gatattgagtatcgtctggcctcaggaaccaatgagaagatccagctgagctcaatgatt
gctgctttccaggctgttagagacatagtggtcagtgatggatag
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integrated database retrieval system
