Chanodichthys erythropterus (predatory carp): 137034717
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Entry
137034717 CDS
T10334
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Cadherin related
137034717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
137034717
NCBI-ProteinID:
XP_067264003
LinkDB
All DBs
Position
1:34581455..34613639
Genome browser
AA seq
2375 aa
AA seq
DB search
MGQRRHDQWLERHVKILFVVVSLVFGRTVWAQIRYSISEEQKDGAAVGNVAKDLGIDHRT
LKERGFRIVSTSGESMFSVNQNDGVLYVNGKLDREEVCERSTPCLIKLKIALENPLEIHY
VTVDVIDVNDHAPRFPDQEKHLEISETVLPGARFQLQAARDPDSGSNSVQTYRLSHTDYF
RIEIIDRDEDGKVPALILQKPLDREITKSIKLQLTALDGGRPPKSGTMEITIDVLDINDN
APVFTKDKYTVTLNENAPVGTTILRVNATDPDEGQNGEIVYSLGHNVNHKLRKLFNVNPI
TGEIVVTGLLDYEIKDKYQIDIQASDKGIVPLTTDKSITIKIADVNDNAPQIEVTSFSSA
VPEDSKPGTTVALISVSDLDSDINGRVTCSLPEDIPFKLMPSSQENTYSLVTTSSLDRET
ISRYDITLEAKDAGQPPLSSVKSITVQVSDVNDNSPEFSFSPYAFYVIENNVPGKSLFSV
SASDKDIGENSVVSYQIWRDGVENKYMSFININSENGEIYALKSFDFETLKTFQFQVVAS
DSGSPSLSSNVTVNVFILDQNDNVPVILYPVSANGSAEGVEEIPRNVNAGHLVTKVRAYD
ADIGYNGWLLFSLQEVSEHSLFGLDRYTGQIRTLRSFTETDEAQHKLLILVKDNGNVSLS
ATATVIVKVVEPKEAFAASDVKNAVKDEEENDVTFYLIITLGSVSVLFVISIIVLIVMQC
SKSTDYSSKYLQDTNYDGTLCHSIQYRSGDKRYMLVGPRMSIGSTIAPGSNRNTLVIPDR
RRRDSGEFVCSKKYIRTVSVHTTNTDLTWHRLVRSSWRLRLTFMALGMLFWRGVCAQIRY
SLSEEQKDGTVIGNLAKDLGLDPRTLKERGFRIVSTSGDSLFTVNQNDGILSVNGKIDRE
VVCERSSSCIINLKIALENPLEIHYVSIEIVDVNDHAPTFPEKEKRLEISESALPGARYQ
LQAARDPDGGMNSVQQYKLSHNDNFRIEVKDRGEDLKMPFLILQKPLDRETSRRHKLHLT
ALDGGRPAKSGTMEIIVDVLDVNDNMPVFTQEVYSVTLRENVPVGTTVIQVNATDMDDGP
NGEVFYSFGKDIDNRIIQLFDLNSSTGEMVVIGLIDFEEMNNFEIDIQASDKGPVPLTSD
KSITIKIIDVNDNVPEIEVTSFSSAVREDSKIGTTVALISVSDLDSGVNGKVLCYITEDI
PFRLTASSQDNIYALVTASTLDRETVPHYDITLVAKDAGQPPLSSVKTITVQVSDVNDNS
PQFSLSPYAFYVMENNIPGKSLFSVSASDRDLDENAVVNYNIWRDSGDENKYASFININS
ENGEIYALKCFDFETLKTFQFQIIASDSGSPSLSSNVTVNVFILDQNDNVPVILYPVSAN
GSAEGVEEIPRNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHSLFGLDRYTGQIRTL
RSFTETDEAQHKLLILVKDNGNVSLSATATVIVKVVEPKEAFAASDVKNAVKDEEENDVT
FYLIITLCSVSVLFVISIIVLIVMQCSKSTDYSSKYLQDTNYDGTLCHSIQYRSGDKRYM
LVGPRMSIGSTIAPGSNRNTLVIPDRRRRDSGETVTGQISYSVSEEVKQGTTVGNIAKDI
NLSVKDLQSRGFRIVSGSKKQYFSVNTETGALQVSERIDREELCAGAISCSVNLEAVVNS
PLQLYRVRINILDINDNSPVFPMSSVVINVSESTAPGVRFPLESAHDADIGVNSVKNYKL
TANDYFTLDVQTHSDKTISAELVLQKALDREKTPRLEFTVTAVDGGSPARTGTVMVEVNV
LDINDNAPVFSKSLYKVSIAEHAPIGTTVTRLQARDLDEGLNAEIVYSFISRTSQNILEK
FYIDAQSGDVKIIGDVDYEENAAFEIRVQATDKGQVTMSGHTKLLIEVLDINDNPPDVTV
TSLLSPVEENAGKGTVIALMTVSDPDSGKNGAVRVRLLGSSPFKLQSSFQNYYSLILDGV
LDRENVTEYNISVIAEDEGSPPMSRAKAIQVQVSDVNDNAPRFPSSVVYAYLRENSKVGS
IIATITASDADIMDNAHLTYSLLQSSVNGTPVSALLRVNSLTGEIESMQSFNFEEMKTFE
FKVQATDSGVPPLSSNVTVNVFILDENDNSPGILAPYSELGSVNTENIPYSAEAGYFVAK
IRAVDADSGYNALLSYHISEPKGNNLFRIGSSSGEIRTKRRMSDNDLKTHPLVILVCDNG
EPSLSATVSIDVVVVESAGDVKTPFRHAPIKEESFSDLNLYLLIAIVCVSVIFLLSLISL
IAVKCHRTDGSLGRYSAPMITTHPDGSWSYSKATQQYDVCFSSDTLKSDVVVFPAQFPPA
DAELISINGGDTFTRTQTLPNKEKCFLLSICVLFD
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaggagacatgatcaatggcttgagcggcatgtgaaaatcctcttcgttgtt
gtatcgcttgtttttggcagaacggtttgggcacaaatacgctactcgatttctgaagag
cagaaggacggagctgctgttggaaatgtcgcgaaggatttgggtattgatcacagaacc
ttaaaagagcgaggatttcgcatcgtctcaacctcaggcgagtccatgttcagtgtgaat
cagaatgacggcgtcttgtatgtgaacggtaaattagatagagaggaggtgtgcgaaaga
tccaccccgtgtttaatcaagctgaaaatcgctttagaaaatcctctcgagattcattac
gtgactgttgatgtgattgacgtgaatgaccacgctccgagattcccagaccaggaaaag
catttagaaataagcgaaacggtgcttcccggtgcgcgattccagctccaggcagcgcgc
gatccagacagcggcagtaattcagttcagacttatagactgagccacaccgattacttt
cgcattgaaattatagatcgtgatgaagacggcaaagttcctgcgttgattttacaaaag
cctctcgaccgagagattacaaaaagcataaaattgcagttaaccgctttagatggaggc
agaccaccaaagtctggaactatggagataacgatagatgtgttagatataaatgataat
gcgcctgttttcactaaagataagtacactgtaacgctgaatgaaaatgcacctgtaggc
acaaccattttaagggtgaacgcaaccgatccggacgaaggccagaatggcgaaatcgtt
tattcattaggacataatgttaatcacaagttgcgcaaactttttaatgttaatccaatc
acaggggaaattgttgtgacaggtcttttggattatgagattaaagataaatatcagatt
gacattcaagcatcagacaaaggaattgttcctctaacaacagataaaagtataactata
aaaattgctgatgtgaatgacaatgcacctcagatagaagtcacatcattctcgagtgcc
gttcctgaagactctaaacctggcacaacggtggctttaataagtgtctctgatttagat
tctgacataaatgggagagtcacctgttcattacctgaggacatacctttcaaactaatg
ccgtcctctcaagaaaacacatactcattggtgacaacatcatctcttgacagagagaca
atttctcgttatgacataacattagaagctaaagacgctggtcaaccaccattgtcttct
gttaaatctataactgtccaggtatcagatgtaaatgacaacagtccagagttctccttt
tctccttacgcattttatgtgattgagaataatgttccaggcaaatctttattttctgtg
tctgcctctgataaagatataggtgaaaacagcgtggtcagctatcaaatatggagagat
ggtgtagaaaacaaatacatgtctttcattaacattaactctgaaaatggagagatttat
gcactaaagagttttgattttgaaactcttaaaacgttccagttccaagttgttgcttca
gactctggaagtccgtctctgagcagtaacgtgacagtgaacgtgtttattctggatcag
aacgacaacgttccagtgatcttatatccagtcagcgctaacggttctgctgagggtgtg
gaagagattccccgtaatgtgaacgcaggtcatttggtgactaaagtcagagcctatgac
gcagatataggatacaacggctggttattgttttcactgcaggaagttagtgagcacagt
ctctttggtttggaccgctatacaggacagataaggacccttcgctcattcacagaaaca
gacgaggcccagcataaactgctcatactggtcaaagacaatgggaacgtttcactctca
gcaacagcgactgtgattgtcaaagttgtggagcccaaagaggcttttgcagcttctgat
gtgaaaaacgcagtaaaagacgaggaggaaaacgacgtgacgttttatttgatcatcact
ttgggctcggtttcagtgctttttgtcatcagcatcatcgtgttgattgtaatgcagtgc
tccaaatctacagactattcgtccaagtatttgcaggacacaaattacgacgggactctg
tgtcacagcatccagtacagatctggagacaaacggtacatgttagttggacccagaatg
agtatcggttctacaattgcgccaggcagtaataggaatactctagtgataccagatcgc
aggaggagagattctggagagttcgtttgcagtaaaaaatacattcgcacggtgtcagtg
cacaccacaaatacagacctgacgtggcatcgtctggtgcgttcgtcatggcgcctcaga
cttacattcatggcattgggaatgctgttttggagaggagtctgcgcacaaatacgatat
tctctttccgaggagcaaaaagatggtactgtgatcggaaaccttgcgaaggatttaggt
ctcgatcccagaacgctaaaggagagaggattccgaatcgtttcaacctcaggcgactcg
ctgttcacggtaaatcagaatgacgggattttaagcgtaaatggaaaaatagatcgcgaa
gtggtgtgcgagagaagcagctcgtgcatcatcaatctgaaaattgcgctagaaaacccg
ttagagattcactacgtgtcgattgaaatcgtggacgtcaatgatcatgccccgacattc
ccagagaaagaaaagcggttggaaatatcggaatctgccctacctggagctcggtatcag
ttacaggcggcgcgggatcccgatggcggcatgaactctgttcaacaatataaactcagt
cataatgataatttccgcatagaggttaaagatcgcggagaagatctaaaaatgcccttt
ttaattcttcaaaagcctttggatagagaaaccagccggagacacaagctacatcttact
gcgctcgatggagggcgacccgcaaagtctggaacaatggagataatagttgacgttttg
gatgttaatgacaacatgcctgttttcacacaggaagtgtactctgtaacgcttagagaa
aatgtccctgtaggcacaactgtaatacaggttaatgctactgacatggatgatggtcca
aatggagaagttttttattcatttggaaaggatatagacaataggataatacaacttttt
gatttaaactccagtactggggaaatggttgtgattggcttgatagattttgaagagatg
aataactttgaaatagatatccaggcatcagacaaaggacctgttcctctcacatcagat
aagagtataaccataaaaatcattgatgtaaatgacaatgtgcctgagatagaagtcaca
tcattttcaagcgcagtgcgtgaagactctaaaattggaaccactgtggccttgatcagc
gtcagtgatctggactctggtgtaaatgggaaagtgttgtgctacattactgaagacata
cctttcaggctaacggcatcatctcaagataatatttacgcgctggttacagcctcaact
cttgatagagaaactgtacctcactatgacatcacgttagtagccaaagatgctgggcag
ccacctctgtcttcggttaaaactataactgtgcaagtatcagatgtaaatgataatagt
ccgcaattttctctttcgccctatgctttttatgtgatggaaaacaatattccagggaaa
tctttgttttctgtgtctgcttctgatcgtgatttagatgaaaatgctgttgtgaactac
aacatttggagagactctggagatgaaaacaaatatgcatctttcattaatattaactct
gaaaatggagagatttatgcactaaaatgttttgactttgaaactcttaaaacgttccag
ttccaaattatcgcttcagactctggaagtccgtctctgagcagtaacgtgacagtgaac
gtgtttattctggatcagaacgacaacgttccagtgatcttatatccagtcagcgctaac
ggttctgctgagggtgtggaagagattccccgtaatgtgaacgcaggtcatttggtgact
aaagtcagagcctatgacgcagatataggatacaacggctggttattgttttcactgcag
gaagttagtgagcacagtctctttggtttggaccgctatacaggacagataaggaccctt
cgctcattcacagaaacagacgaggcccagcataaactgctcatactggtcaaagacaat
gggaacgtttcactctcagcaacagcgactgtgattgtcaaagttgtggagcccaaagag
gcttttgcagcttctgatgtgaaaaacgcagtaaaagacgaggaggaaaacgacgtgacg
ttttatttgatcatcactttgtgctcggtttcagtgctttttgtcatcagcatcatcgtg
ttgattgtaatgcagtgctccaaatctacagactattcgtccaagtatttgcaggacaca
aattacgacgggactctgtgtcacagcatccagtacagatctggagacaaacggtacatg
ttagttggacccagaatgagtatcggttctacaattgcaccaggcagtaataggaatact
ctagtgataccagatcgcaggaggagagattctggagagactgtaaccggacagatctca
tacagtgtgtcggaggaggtgaaacagggaaccacagttggtaatatagctaaagacatt
aacctttcagtaaaagatctgcaatcgaggggtttccgtatcgtgtcaggctctaaaaag
caatatttcagtgtgaatacagagacgggtgctttgcaggtgagcgaaaggattgatcgc
gaggagctttgcgcaggcgcaatctcatgctccgtcaatctggaagctgtggtgaacagt
ccactgcaactctaccgggtaagaataaacattctcgatattaatgacaactctccagtg
tttcctatgagctccgtagtgattaatgttagtgaaagcaccgcgcccggtgtgcgcttt
ccactggagagcgcgcatgacgcagacattggagtgaattcagtaaaaaactataagctt
accgctaatgattacttcaccttagatgtacaaactcatagtgataagacgatctctgct
gaattagtgcttcagaaggctttagacagagagaagactccgcggctcgagttcacagtg
actgcggttgatggcggatcgcctgccagaacaggaaccgtgatggtcgaagttaatgtg
ttagatatcaatgataacgctccagttttcagtaagtcattatataaagtctccatagcc
gagcacgcgccaattggcaccacagtaaccagacttcaagctcgagatttggatgaaggg
ttgaatgcggagatagtttactcctttatcagtcgaacatcccaaaatattctagaaaag
ttttatattgacgcgcaaagtggagatgttaaaattataggtgatgttgattatgaggag
aacgctgcttttgagatcagagttcaagctactgataaaggtcaggtgactatgtcaggc
cacaccaagcttttaatagaggttcttgacattaatgataaccccccagatgtgactgtg
acatcacttcttagcccggtagaggaaaacgcggggaagggaacggtaattgccctaatg
accgtatcagatccagactcgggtaaaaacggagcagtgcgcgttcgccttttaggttcg
agtccgtttaaattacagtcgtcctttcagaactactattcgttaattttagatggcgtg
ctagatcgggaaaacgtaacggagtataacatctcagtgattgctgaagacgaagggtca
ccgccaatgtccagagctaaagcaatacaagtgcaggtctctgatgtgaatgacaatgca
cctcgcttcccaagttctgtagtgtatgcgtatctgcgtgaaaacagcaaagtgggatcc
attatagccacaataactgcctctgatgctgatatcatggacaatgcgcatttaacatac
tctttactgcaaagctctgtcaatggcacacctgtttcagcgctcctcagagtcaactca
ctgacaggagagatcgagagcatgcagtcgtttaactttgaggaaatgaaaacgtttgag
tttaaagttcaggccacagactctggtgttcctcctctcagcagtaacgtgactgtaaat
gtttttatcctggatgagaacgacaacagtcccgggattctcgcgccctattccgagctc
ggttccgttaacacggagaacattccgtattctgctgaggcgggctactttgtggccaag
atcagggctgtagatgcagattctggttacaacgcgctgctgtcttaccacatctctgaa
cccaaaggaaacaatctgttccgaatcggaagcagcagcggggagatcaggactaagagg
agaatgagtgacaatgacctgaaaactcacccgctggtcattttggtgtgtgataacgga
gagccctcactgtcagcgactgtgtctattgatgttgtggttgttgaaagcgcaggtgac
gtcaagactccattcagacacgcgccgataaaggaggagagtttctcggatttaaatctg
tatttgctgatcgccattgtgtgtgtgtccgtcatctttttactgagcctcatcagtttg
atagctgtaaaatgccacaggacagacggcagtttgggcaggtacagcgccccgatgatc
accacacaccctgacgggagctggtcttactccaaagctactcagcagtatgacgtgtgt
tttagctcggacacgctgaagagtgacgtagtggttttccccgcgcaatttccgcctgca
gatgcagaactgatcagtattaatggaggagacacttttaccagaacacaaacacttcct
aataaagagaagtgtttcctcttatctatatgcgttctttttgactaa
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integrated database retrieval system
