Chanodichthys erythropterus (predatory carp): 137034719
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Entry
137034719 CDS
T10334
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
cery04148
Efferocytosis
cery05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137034719 (vps33a)
04148 Efferocytosis
137034719 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137034719 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137034719 (vps33a)
Membrane trafficking [BR:
cery04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137034719 (vps33a)
Hops complex
137034719 (vps33a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF7816
Motif
Other DBs
NCBI-GeneID:
137034719
NCBI-ProteinID:
XP_067263966
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Position
13:complement(15816418..15824704)
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AA seq
598 aa
AA seq
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MASHLFCGRVNLNILREAARKDLREFLDKCSGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRIPSAAVKNIVFFVRPRLELMDIIAENVASEDKLQPRDFHILFVPRRSLLC
EQRLKEKGVLNSFTNIDEYILDLIPYDGDLLSMESESSFRECYLESDQTSLYHAAKGLMT
LQALYGTIPQIFGKGECARHVANMMLRMKREFSGHAQILPVFDTLLLLDRNVDLLTPLAT
QLTYEGLIDEIYGITNGYVKLPPEKFAQKKPGEGGKDLPTEPKKLQLNSAEELYAEIRDK
NFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAELVK
DITTSEAFFDNLTVEQEFMTGVDTDKVSTYIEDCIAQKDPLIKILRLVCMQSVCNNGLKQ
KVFDYYKREILQTYGYEHILTLKNLEKVGLLKPQSTMRNNYPTIRKTLKLWMEDANEQNP
NDISYVYSGYAPLSVRLTQVLARPGWRSIEEVLKMLPGPHFEERQQVPTGLHKKRQPGEN
RTTLVFFIGGVTYAEIAALRFLSNMEDSGTEYIIATTKLINGTSWIKSLMDHPEDKFP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcatttgttttgtggcagagtgaacctcaatatcctgagagaagctgcgcga
aaagacctgcgcgaatttttagataaatgttcgggaagcaaggccattgtttgggacgag
tatcttactggacctttcgggttaattgctcagtattctcttctgaaggaacatgaagtc
gagaagatgttcactctcaaaggaggtcgaatcccatccgctgccgtcaagaatattgtc
ttcttcgttcgaccacggctggaattgatggacatcattgcagaaaatgttgcaagtgag
gataaattacagccacgagatttccacatcctgtttgttcctcgccggagtctcctgtgt
gagcagcggctgaaggagaaaggcgttctcaactccttcactaacatcgatgagtacatt
ctggacctgattccttacgacggagaccttctgtccatggagtctgagagctcctttagg
gaatgttatttggagagcgatcagacgagcctgtatcacgctgccaagggcctcatgact
ttacaagcactttacgggacgataccgcagatcttcggcaaaggagagtgtgccaggcat
gtggccaacatgatgttgcggatgaagagagagttttcaggtcatgctcaaatcctgcct
gttttcgatactcttctcctgctggatcgcaatgtggatctgcttacaccgttagccact
caacttacttacgagggtctgatcgatgagatctacggcatcaccaatggttatgtgaag
ctgccgcctgagaagtttgcgcagaagaaaccgggagaaggagggaaagatctccccact
gagcccaaaaaactgcagctgaactctgccgaggagctttacgccgaaatacgtgacaag
aacttcaacgctgtcggtgcggctctcagcaagaaagccaagatcatctcagctgcgttt
gaggaacgacacaacgcaaaaacagttggggagatcaagcagtttgtctctcagttgcct
cacatgcaggcggcccgcagctctctggccaatcacacctccatcgctgaactcgttaag
gacatcacgacctcagaagccttctttgacaatctgaccgttgaacaagagttcatgact
ggagtagacacggacaaggtcagcacgtatattgaggactgcatcgcacagaaagacccg
ctgattaagatcctgcggctggtgtgtatgcagtcggtctgcaacaacggcctcaaacag
aaagtgttcgactactataagagggagatccttcagacgtatggatacgagcacattctg
accctcaagaacttggagaaggttgggttactcaaacctcaaagcaccatgaggaacaac
taccccaccatcaggaaaacactcaaactgtggatggaggatgccaatgaacagaacccc
aacgacatctcgtacgtgtacagcggctacgctccgctcagcgtgcgtctgactcaggtg
ctggcgcggcccggctggcggagcatcgaggaggtgctgaagatgctgcccggcccacac
tttgaagaaagacagcaggttcccacaggccttcacaagaagcgtcagccaggagaaaac
agaaccaccctggtcttcttcatcggcggtgtgacttacgctgaaatcgctgctctgcgc
ttcctgtctaatatggaagatagtgggactgagtacattattgcaaccaccaaactgatc
aatgggaccagctggataaagtctctcatggaccatcctgaggacaaattcccttga
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