Chanodichthys erythropterus (predatory carp): 137034752
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Entry
137034752 CDS
T10334
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137034752 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137034752 (usp39)
Spliceosome [BR:
cery03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
137034752 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
137034752
NCBI-ProteinID:
XP_067264017
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All DBs
Position
13:complement(12467080..12478451)
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AA seq
497 aa
AA seq
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MIAGVKRERDVDEDEDEEVRVKFGRSHVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGQKSHAYIHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPL
RNYFLEEDNYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPAEEK
EALLLKEEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKEY
KTYKENFLKKFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQA
TEKVTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYIQ
IWKRQDKDDGAESHSGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagggacgttgatgaagatgaagatgaagaggttcgt
gtgaaattcggtcgatctcatgttgaagatcgcagaagccgccattgtccgtatctggac
acaattaacaggagtgttttggatttcgacttcgagaagctttgttcaatctctctttca
cacattaatgtctatgcctgtctgatctgtgggaaatatttccaaggtcgaggtcagaag
tctcatgcgtacatccacagcgttcagttcacacatcatgttttcctgaatctccacacg
ttaaagttctactgcctgccagacaattatgagatcattgactcctcattagaggacatt
acgtatgtgctgaaacccacattcaccaagcagcacatctctggtttggataagcaggga
aagctgtacagagcctacgatggcacaacatatttgcctggaattgtgggtctcaataat
atcaaggccaatgactatgctaatgtggttttgcaggcgctgtcaaatgtgccccctttg
cgaaactacttcctcgaggaggacaactatcgtggaattcgtcggccgccgggtgacatc
atgtttctgctggtgcagcgtttcggggagctcatgcgcaagctgtggaacccgcggaac
ttcaaagcccacgtgtcgccgcatgaaatgttgcaggctgtggtgttatgcagtaaaaag
aactttcagatcactaagcaaggggatgctgttgactttctctcctggttcctgaatgca
ttgcatggtgctcttggtgggacaaagaagaaatcatccattctcaccaaggtgtttcag
gggtccatgcggatcttctcaaagaagcttcctcatcctgatttgcctgctgaagagaaa
gaagcccttctccttaaggaggagtaccaggaggagatgtcggagtccacttttctgtac
ctgacccttgacctgcccaccgcacccctctacaaagatgagaaggagcagctcatcatt
cctcaggttcctctcttcaacatcctgggcaagttcaatggaaacactgagaaggagtac
aagacctacaaagagaactttctgaaaaagttccagctcaccaaacttcccccatacctc
atcttctgcatcaaacgattcacaaagaacaacttctttgtcgagaagaaccccaccatc
gtcaacttccccatcacgaatgttgatttgcgtgagtacctcacagaagaggcgcaggct
accgagaaggtcaccacctatgacctggtggccaatgtagttcatgatggaaaacccact
gagggttcctatagaattcatgttctgcatcatggcacagggaagtggtatgaacttcag
gacctgcaggtgattgatatcctcccacagatgatcacactctcagaggcgtacatacag
atttggaagagacaagataaagatgatggagcagaaagccattcaggggcatag
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