Chanodichthys erythropterus (predatory carp): 137035392
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Entry
137035392 CDS
T10334
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04382
Cornified envelope formation
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04518
Integrin signaling
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137035392 (col4a2)
04518 Integrin signaling
137035392 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137035392 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137035392 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137035392 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137035392 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137035392 (col4a2)
Exosome [BR:
cery04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137035392 (col4a2)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137035392 (col4a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137035392
NCBI-ProteinID:
XP_067264724
LinkDB
All DBs
Position
14
Genome browser
AA seq
1672 aa
AA seq
DB search
MEGEKHLQHWNTLRCFLLCFAVLVLTTEVNAGVKKSSGPCGGRDCSGGCRCYPEKGARGS
PGPLGPQGPTGPNGRQGDPGLQGPKGEKGDHGKGGTMGLKGSVGMQGVPGFDGADGVPGH
PGPSGPRGKPGADGCNGTRGESGIPGFSGINGGPGIPGRPGMKGEKGDPLELWVYMERFR
GDPGPPGYQGFIGPTGNPGYSGPPGLQGPWGPTGSKGVKGQKGETTKRIKGIKGEGGDIG
EPGPPGLFPLIRPIPTEWQGEKGLKGNKGKPGDSAYVSTKGETGVTGPPGQRGKSGNNGL
EGPKGDTGLPGFPGNPGRKGDRGEPGELIGSPNDQTGAGPPGPPGERGPIGNYGSKGAKG
LPGPPGPPASEQQQEVLWGPEGPRGPRGPKGGKGEAGEPGNPATQPGPPGSDGLPGFQGP
PGPKGSLEDFFKGAAGPRGRPGNAGKKGPKGDHGLCECLEKSPSGPPGPPGDAGDPGMAG
EWGQQGDQGDPGPRGVDGLIGFPGTRGSSGLKGRKGEIRAATQKGLPGDPGNPGQSGFPG
EQGRPGLSGKDGEPGFRGSPGEGPVGEPGEKGYPGPPGPPGLIGPTGQPGDVLGATKGVR
GLRGDDGQIGPDGEKGLPGAPGACSSRGDQWNIEVECIGDPGPPGETGQPGLPGLKGFPG
IPGAKGVQGLSGEPGAEGERGEPGRGGPPGPRGFVGPRGDLGYPGTKGVQGDPGISGKPG
LDGALGEKGEHGEVLGASSGAPGEPGRPGERGVTGLPGDPGPKGHPGMDGMPGIIGIKGE
IGPPGLRGEVGKPGLQGTFGFPGLPGYTGPPGPPGKTGEPGPSGVRGDQGDPGLSGPRGV
KGAIGDPGNIGIPGNTGPPGDPGQPGPFGFGGLPGLKGSKGGQGMTGFPGKIGETGLKGL
SGKKGQIGLPGQQGVKGAPGPPGEKGERGLVGPPGEKPIIHISPQEKEVMKGAKGDHGNM
GDPGFTGPRGTKGAPGYPGGDGKDGHPGKPSVTKGTQGLPGEEGELGPKGMPGPTGLPGI
DGFPGMAGPRGDKGSPGAYGRTGESGIKGIKGELGPTISLPGSTGLRGETGLSGPSGEKG
LIGQPGDRGGPGFDGIVGMKGQPGEPGKVGPPGSDGQQGFPGNQGHKGWPGEPGQKGTPG
IQGQPGQKGFPGLKGIFGLDGLKGQKGTQGVPGTDNWGPPGEPGARGEIGETGIPSTEAG
IPGNLGLKGFTGEPGDKGESGHPGVRGPPGPDGYSDIPGVPGDYGFPGTKGLPGFPGPRG
IPGEPSPFGAKGEKGNLGDFGFTGEKGVYGDRGEKGQSGEPGVSGRKGERGDPGMMGLPG
RRGFEGNRGPVGPKGDTGPPGFPGSPGAKGLPPIPQKIPGERGQPGPMGIQGPNGRNGNP
GPAGPPGDAGVLGPKGHKGMPGLPGIPGNPGFRGEPGQMGHPGLQGEEGARGRSGLPGPI
GMAGRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLP
RFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVA
IAIHSQDITIPQCPVGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECN
GAKGTCHYFANKQSFWLTSIDQTFQSSPVSETLKAGQLLSRISRCQVCMKNL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaacatctacagcattggaacacattaaggtgttttctgttgtgcttt
gcagtccttgtccttacgacagaggtcaacgcaggagtgaagaagagcagtggaccatgt
ggggggagagactgcagcggaggctgtcggtgttatcctgagaagggtgcgaggggatcg
cctggaccccttggtccccagggccccacaggccctaacggacgacagggtgaccctggt
ctccagggccctaaaggagagaagggagaccatggcaaaggaggcactatgggtctaaaa
ggaagtgtgggaatgcaaggggttccagggtttgatggagcagatggtgttccaggccac
cctgggccatctgggcctcgtggaaaaccaggagctgatggctgtaatggaacccgggga
gaatcaggaattccaggcttttcagggatcaatggtggacctggaataccaggtcggcca
ggaatgaagggggagaagggtgaccctttggagctgtgggtctatatggaaagattcagg
ggagatccagggccaccaggttatcaaggatttattggtccgactggtaacccagggtac
agtgggccaccaggattacaaggaccttggggtcctactggtagtaaaggtgttaaagga
caaaagggtgaaaccactaaaagaataaaaggaatcaaaggagaagggggggacattgga
gagccaggaccaccaggacttttcccgctcataagaccaatccctacagaatggcagggt
gaaaaagggttgaagggtaataaaggtaaaccaggagattcggcatatgtatctacgaaa
ggagagactggtgtgacaggtcctccaggacaacggggaaaatcaggaaataatggcctg
gaaggacctaagggtgacactggactaccaggttttccaggaaatcctggccgcaaggga
gacagaggagagcctggagagctgataggaagtccaaatgatcagactggagcaggtcct
ccagggcctccaggggagcgtggcccaattggaaattatggttctaagggtgctaaagga
ctgccaggtcccccaggaccccctgcctctgaacaacaacaagaggttctgtggggccca
gagggaccaaggggaccaaggggaccaaagggaggcaaaggtgaagctggagaacctggt
aatcctgccactcaacctgggccgcctggctccgatgggctgcctggatttcagggacca
cctggacccaagggatcattggaagatttctttaaaggcgccgccggtccacgtggacgt
ccagggaatgcaggaaaaaaaggaccaaagggtgaccatggtctgtgtgaatgccttgaa
aaatccccttctggccctccgggccctcctggtgatgctggggaccctggaatggctggc
gagtggggtcagcagggtgatcagggagacccaggacccagaggtgtcgatggtcttatt
ggttttcctggtacaagaggatcgtctggactcaaaggcaggaaaggagagataagagca
gctacacagaaaggattacctggtgacccagggaacccaggtcagagtggtttcccagga
gagcaaggaaggcctgggcttagtggaaaagatggtgaaccaggttttagaggatctcct
ggagaaggtcctgtaggtgagcctggagagaagggatacccaggtcctccaggtccccca
ggtctaataggccccacaggacaacctggcgatgttcttggagcaactaaaggtgtaagg
ggccttcgaggagatgatgggcaaattggtcctgatggagaaaaaggtttgcctggtgcc
ccaggagcctgtagctcaagaggagatcaatggaatattgaagtggagtgtattggagat
cccgggccacctggagagacaggtcaaccaggacttccagggttgaaaggatttcctgga
ataccaggtgctaaaggtgtacaaggtctttctggagaacctggggccgaaggagagcga
ggtgaaccaggaagaggaggcccacctgggccaaggggttttgttggacctcggggagat
ttaggatatcctggcaccaaaggtgtgcaaggagatccgggcatctctggtaaaccaggt
ttggatggtgctttaggggaaaagggtgaacatggtgaagttttaggagcatcttctgga
gccccaggagaaccaggacggccaggagagaggggtgtcactggccttccaggagaccca
ggcccaaaaggacacccaggtatggatggtatgccaggtattatcggcatcaagggtgaa
attggccctccaggtctcagaggagaggtaggaaaacctggactgcaaggaacatttggc
tttcctggcctgcccggttacacaggacctcctggaccacccggaaaaactggagaacca
ggtccaagtggagtaaggggagatcagggagacccaggtctttctggacccagaggagta
aagggtgccattggagaccctggaaatattggtataccaggaaatactgggcccccagga
gatccaggacaaccggggccgtttgggtttggtggtctcccagggttaaaaggttccaaa
ggtggtcagggcatgacaggttttcctggaaagattggtgagacaggtttgaaaggactt
tcaggaaagaaaggacagataggcttacctggacaacaaggtgtaaaaggagctcctggc
cctccaggtgaaaaaggtgaaagagggctggtgggacctccaggtgaaaagccaatcata
catatatcaccacaagaaaaagaggtcatgaagggggctaaaggtgaccatggaaatatg
ggagatcctggcttcactggtcccagaggtacaaaaggtgccccaggttatccaggaggt
gatgggaaagatggacatccaggtaagcctagtgtcacaaaaggtactcaaggtcttccc
ggagaagaaggtgaattggggcctaaaggaatgccagggcctacaggactccctggaatt
gatggtttccctggaatggctggacccaggggtgacaaaggctcacctggtgcctatgga
aggaccggagaatctggaatcaaaggaataaaaggtgaactgggtcctaccatcagtctt
ccagggtcaacaggactgagaggtgaaactgggctgtctggaccttcaggtgagaaggga
ctcataggtcaacctggagatagaggaggtcctggttttgatggcattgtagggatgaaa
ggccaaccgggtgaaccaggaaaagttggaccaccaggctctgacggccagcagggtttc
ccaggaaaccagggtcataagggctggccaggagagcctgggcagaaaggaacccctgga
atccaaggccaaccgggacaaaaaggatttcctggtcttaaaggcatttttggtttggat
ggcctgaaaggtcaaaagggtacccaaggtgttccaggtactgacaactggggtcctcca
ggtgaaccaggagcaagaggagagataggagagaccggtatcccgagcacagaggctggc
atccctggaaatctgggccttaagggtttcactggagagccaggtgataagggtgaatct
gggcatccaggtgtacgaggtcctccaggcccagatggatactctgatataccaggagtg
ccaggcgactatggttttccaggcactaaaggacttccaggttttcctggtcccagaggg
attccaggtgaaccatctccatttggagcaaaaggagagaaaggaaatttaggtgatttc
ggattcaccggagaaaaaggagtctatggagacagaggagaaaaaggacagtcaggggaa
cctggagtatcaggaagaaaaggtgaaagaggagacccaggaatgatgggacttccagga
agacgtggttttgaaggcaacaggggccctgttggacctaaaggagatactggaccccca
ggtttccctggttcacctggtgctaaaggacttccacccattccacagaaaatcccaggg
gagagaggacaacctggcccgatgggtattcaaggaccaaatggacgcaatggaaatcca
ggtcctgctggacctcctggtgatgcaggggttttgggtccaaagggacacaagggcatg
ccaggtctccctggaatacctggaaatccaggcttccgtggagaacctggacaaatgggc
caccctggtctgcaaggcgaagaaggggcccgaggacgctctggtttaccgggtcctatt
ggaatggctggccgtagtgtcaatgttggctacctgctggtgaagcacagtcagtctgag
cagattcccatgtgccctgtgggcatgtccaagctatgggacggttatagccttctgtac
tttgagggacaggagaaggcccacaaccaagacctgggtctagctggctcatgtctcccc
cgttttaacaccatgcccttcctttactgcaatccgggggacatatgctactatgccagc
cgcaatgacaaatcctattggctgtccaccactgcaccaattcccatgatgcctgtggag
gaggctgagataaaaccatacatcagccgttgttccgtgtgtgaagcaccatcagtggcc
atcgccatacacagtcaagatataactatcccacaatgcccagtcggatggagaagtctc
tggattggctattccttccttatgcacacggcagctggagatgaaggtggcggtcagtct
ctggtgtctccaggctcttgtctagaagatttccgcaccactcccttcatcgagtgtaat
ggggccaagggtacatgtcactacttcgccaacaagcagagtttctggttgacctctatc
gatcagaccttccagagttcccctgtctctgagacactcaaagccgggcagctcctgtca
cgcatcagccgctgccaagtgtgtatgaagaacttgtga
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integrated database retrieval system
