KEGG   Chanodichthys erythropterus (predatory carp): 137035394
Entry
137035394         CDS       T10334                                 
Symbol
col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery04382  Cornified envelope formation
cery04510  Focal adhesion
cery04512  ECM-receptor interaction
cery04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cery00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137035394 (col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137035394 (col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137035394 (col4a1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137035394 (col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cery04147]
    137035394 (col4a1)
   00536 Glycosaminoglycan binding proteins [BR:cery00536]
    137035394 (col4a1)
Exosome [BR:cery04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137035394 (col4a1)
Glycosaminoglycan binding proteins [BR:cery00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137035394 (col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137035394
NCBI-ProteinID: XP_067264727
LinkDB
Position
14:complement(41650568..41728049)
AA seq 1640 aa
MRLPCVTVFLLTVSLSIDKSTAKGGCSGSSCGGCDCSGVKGAKGEVGLPGLMGLVGFPGL
PGHEGPTGPMGPKGDAGEPGAPGMKGNRGPPGVAGFPGRPGIPGLPGLEGAPGPHGIPGC
NGTKGDRGFDGIPGVPGVQGPPGIPGLKGIKGDPGGVIGVPIPQKGDRGLPGQPGSPGQK
GNPGQQGPFGPPGPIGPPGRPGEPGQKGEPGDKLTFQGEKGDKGERGLTGPPGPPGRQEE
AGGPSTTIYVPGPPGETGSSGEKGEKGFCAPHYAGVKGEAGPPGPIGKPGKDGQSGEKGE
MGLSGPPGYDGLKGDKGERGPPGYGFGPPGPPGPPGPRGAEGETGYPGERGNPGPPGRDR
EGPPGPRGLPGEIGQKGDKGADGVSLKGSKGADGQPGPPGQPGPINEDCDIERGPPGPPG
PPGLQGEVGQKGDQGETCTQCTGLGPPGLPGPQGPKGQQGFPGQAGSKGEKGVPGPSGPA
GNPGQDGSPGLMGAPGAQGEPGDVFVAPGYKGDKGLPGATGDRGFPGIDGLPGKDGRPGQ
PGAKGEPARVGIKGDRGLDGDQGIIGPPGERGPPGFPGIGRPGEPGEKGFAGLPGAPGRP
GLPGSKGDAGKILSFPGPQGAPGPRGETGRPGLQGDRGLPGERGVQGFPGHKGEPGLPGI
GLPGPPGPKGYSGIPGPSGIPGEPGQPGQDGFPGRAGTPGQKGEPGRGLPGPKGAIGQPG
LPGFPGEKGNPGMTGVPGTDGRTGPPGPQGIKGNLGPPGVHGPVGPPGPPGLGEPGPPGP
MGPPGGPGPLGQIGIKGEKGYQGLPGLDMPGPPGDRGSPGVPGLPGPKGFSGQPGLPGKD
GFPGERGPKGEIGIMGMTGPPGFPGSIGNPGEPGQRGDPGLIGVRGEFGDPGPKGERGEQ
GLQGPPGNMSDVDMGHLKGDKGDIGDRGDPGPAGEKGFPGTPGDPGMPGKDGMPGSPGQP
GDKGDPGIPGEPGRIGDPGDKGPRGDMGYPGSMGPKGVKGIGGSPGHPGFKGLDGPKGDK
GDPGEAGIGIPGPPGAKGNVGAPGFPGEPGVKGEKGIMGIPGTPGTQGPKGDTGFIGYPG
SPGKPGEKGVSGLPGSPGDPGLSGRPGEPGLQGPPGPHGDKGEAGVDGIPGFTGERGEPG
IPGKGLPGTRGEPGRKGDKGNPGLPGIPGSPGIPGTKGEKGLQGFQGDLGRPGERGLAGT
PMEGPKGDRGPQGQPGEKGATGLPGQPGIPGSAGSKGEKGDAGYPGPPGSQGYKGDKGFT
GGPGEPGLPGYNGPKGEMGPQGVPGFPGIKGEQGVLGPKGEGGDRGFPGVKGSEGPPGPP
GPHTLVKGDPGYPGPQGPQGPAGIQGFPGPKGQQGVTGPQGSKGSDGTPGYNGLPGAKGE
PGQTGPSGPRGYPGPPGPDGIPGHIGPPGPSSMDHGFLVTRHSQTIDVPQCPDGTTLIYD
GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM
PMSMAPVTGQSIKPFISRCAVCEAPAMVIAVHSQTIRIPACPRGWDSLWIGYSFVMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSDMFTKPVPTT
LKAGNLRTHISRCQVCMKRV
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgcggcttccatgtgtcactgtttttcttctcacggtctctttgagcattgacaagagc
acagctaagggaggttgctctgggtcttcatgtggtggatgtgactgcagtggtgttaaa
ggggcgaagggtgaggttgggctccctggtttgatgggccttgtcggatttcctggattg
ccaggtcacgagggccccacagggccaatgggaccaaagggagatgcaggggagccagga
gctccaggaatgaaaggaaacagaggcccacctggtgtggcaggtttcccaggacgtcca
ggtattccaggtcttccaggtctagaaggtgcacctggacctcatggaattccaggctgc
aatggaaccaagggggatcgtggttttgacggaattccaggtgttccaggagtgcaggga
ccaccaggtattccaggtttgaagggaataaagggagatccaggtggtgttattggagta
cccatccctcaaaaaggagacaggggcttgccaggacaacccggttcaccagggcaaaaa
ggaaatcctggacaacaagggccattcggcccacctggaccaattggacctcctggaagg
cctggtgaacctggtcaaaagggagagccgggtgacaagctgacatttcagggtgagaaa
ggagataagggagagcgaggtttgactggtccccctggtccaccagggagacaagaagaa
gctggaggccctagcacaacaatttatgttcctggaccgccgggagaaacaggctcttca
ggagagaaaggagaaaaaggtttttgtgcaccacattatgctggagtcaaaggtgaagca
ggaccaccaggaccaatagggaaaccaggcaaagatggacagagtggagaaaagggggaa
atgggcttgtctggtcctcctgggtatgatggcttgaagggtgacaaaggagaaagagga
ccaccaggatatggttttggtcctcctggccctcctggtcctcctggcccccgtggagca
gaaggagagacaggttatccaggagagcgtggaaatcctggtcccccaggcagagatagg
gagggtcctcctggacctcgtggcttacctggagagattggccagaagggagataaagga
gctgatggagtgtctcttaaaggttcaaaaggagctgatggacaacccggcccacctggc
caaccagggccgatcaatgaagactgtgatattgaaagaggacctccaggccctccggga
cctccaggattgcaaggagaggtgggacagaaaggtgatcaaggcgaaacatgcacacag
tgcactggtttagggcccccgggtttgcctggtcctcaggggccaaagggtcagcaaggt
tttcctggacaagctggaagcaaaggagagaagggtgtgccaggaccttctggacctgct
ggaaatcctggtcaagatggctctccaggtttaatgggtgcccctggtgctcagggtgag
cctggtgatgtctttgtggctccaggatataaaggagataagggtttacctggtgctact
ggagacagaggattcccaggtattgatgggctaccaggaaaagatggccgaccagggcaa
cctggagccaagggagaacctgctagagttggtattaagggtgatcgtggcctggatgga
gatcaaggtatcatcggccctccaggtgaaagaggtcccccaggtttcccaggcatagga
cggccaggtgaacctggtgaaaaaggctttgcagggttgcctggtgcaccagggaggcca
ggattaccaggaagtaaaggtgatgctggtaaaatattaagttttcctggacctcagggt
gccccagggcctcgtggagagactggcagacctggtcttcaaggtgatagaggacttcca
ggtgaacgtggagttcaaggatttccaggacacaaaggtgaacctggactgccaggaatt
ggactccctgggcctccagggccaaaaggatactctgggattccaggtcccagtggaatt
ccaggagagcctggtcaaccaggtcaggatggctttcctggtcgtgcagggacacctggg
caaaaaggtgaacctggcaggggtcttcctggtcctaagggtgctataggtcagccagga
ctgccaggatttccaggggaaaagggtaatcctggaatgacaggggttcctggaactgat
gggcgtactggaccacctggacctcaaggaatcaaaggtaaccttggaccacctggagtt
catggtccggtggggccgccaggtcctccaggacttggagaacctggaccacctggacca
atgggaccacctggaggccctggaccccttggtcagatcggtataaagggtgagaaaggt
tatcaaggtctacctggtctggacatgcctggacctccaggagacaggggtagccctggt
gtcccaggtctaccaggacctaagggtttttctggtcaaccaggacttcctggaaaagat
ggcttccctggtgaacgtggtccaaaaggagaaattggaatcatgggaatgacaggaccc
cctggatttccaggttccattggaaaccctggagaacctggacaacgaggtgaccctggt
ttgattggggtcaggggagagtttggtgatccaggtcccaagggtgagagaggagagcaa
ggtctacaggggccacctggtaacatgagtgatgtggatatggggcacttgaaaggagac
aaaggagacatcggagacagaggtgatcctggtcctgctggagaaaaggggttccctgga
acacctggagaccctggaatgccaggaaaagatggaatgccaggatcacccggacagcca
ggtgataaaggagaccctggaatccctggggagccaggacgtattggagaccctggagac
aaaggtccaagaggagacatgggatacccaggttcaatggggccaaaaggtgttaaaggt
attggtgggtcaccgggtcaccctggatttaagggtcttgatggccccaaaggagataaa
ggagatcctggtgaagcaggaataggaatccctggtccccctggagcgaagggaaatgta
ggcgcccctggtttccctggtgaacctggagtgaagggagagaagggaataatgggtatc
ccaggaactcctggaactcaaggacctaaaggagacacaggattcattggttacccaggc
agtccagggaagccaggtgagaaaggtgtcagtggtttgccggggtccccaggagatcct
gggctatcaggacgtccaggtgagcctggtctgcagggtcctccaggtccacatggtgac
aaaggtgaagcaggggtagatggtattcctggattcactggagagagaggagaacctggt
atacctgggaaaggactgccaggaacccgcggagagcctggcaggaaaggtgacaaaggc
aaccctggtcttcctggcattcctgggagtccaggtatccctggaaccaaaggtgagaaa
ggtctgcaaggattccaaggggacctaggtcggcctggagagagaggacttgcaggaaca
cccatggaggggcctaaaggggacaggggacctcaggggcagccaggagaaaaaggtgca
actggtcttccaggccaacctggtataccaggcagtgctggatctaaaggagaaaaggga
gatgcgggctaccctggcccaccaggctctcaagggtataaaggagacaaaggtttcact
ggtggtcctggtgagcctggattgcctggttataatggaccaaagggtgagatgggacca
cagggtgttcctggtttccctggtataaaaggtgagcaaggagtgcttggtcctaaaggt
gaaggaggtgatagaggattcccaggtgtcaaaggtagcgaaggaccccctggaccccct
ggaccgcatacacttgtaaagggagatcctggttatccaggaccacagggtccccaaggt
ccagctggaatccaaggcttccctggaccgaaaggacaacagggtgtgacgggacctcag
ggttcaaaaggttctgatgggacacctggctataatggacttcctggagcaaaaggagag
cctggacagacgggaccctctggtcccagagggtaccctggacccccagggcctgatggt
atcccaggtcacatcggccctcctggcccttcctcaatggaccatggcttccttgtaacc
cgccacagtcagactattgatgttccacaatgtccagatggaacaacgctgatctatgac
ggatattcgttgctttatgtccagggcaacgagaggtcacatgggcaagacctaggtaca
gctggtagctgtctaaggaagttcagcccaatgcctttccttttctgcaacatcaacaac
gtatgtaactttgcatctcgtaatgactattcttactggctcacctctcccgagcccatg
cccatgagcatggcccctgttaccggtcagagcatcaaacctttcatcagcagatgtgca
gtttgtgaggctcctgctatggtgatagctgtgcacagtcagaccatcaggatcccagcc
tgtcctcgtggttgggattctctctggatcggatactctttcgtcatgcacaccagcgct
ggtgctgagggctccggtcaggctcttgcctctcctggctcttgtctggaagaattccgc
tcggctcccttcatcgagtgtcatggtcgtggcacctgcaactactatgctaattcctac
agcttctggttagccaccatagaggacagcgatatgtttacgaaacctgtcccaacaaca
ctaaaagctgggaatctacgaactcacatcagcaggtgtcaagtgtgcatgaagagggta
tag

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