Chanodichthys erythropterus (predatory carp): 137035880
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Entry
137035880 CDS
T10334
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137035880 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137035880 (prpf40a)
Spliceosome [BR:
cery03041
]
Complex A
U1 snRNP components
U1 related factors
137035880 (prpf40a)
Complex B
137035880 (prpf40a)
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
137035880
NCBI-ProteinID:
XP_067265753
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All DBs
Position
14:complement(45682558..45710160)
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AA seq
850 aa
AA seq
DB search
MMGPPGIPPHFPPMGMPPMGQRPPSMAPMPPGIMPPMMPPMGAPPMGQMPAMMPPMMPGM
MMPPRLPAASIQPTGPPGVSPVESAAPAAPGTTSTSTESSPDEQPKKKSVWTEHKSLDGK
TYYYNTETKQSTWEKPDELKSPAEQMLSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKEL
EDLEAMIKAEENGTADVVAPGTTPALTSQSESSVTVAAVAETEATMATGTSEEQPAHVPA
QVAEISSDVTVNSTEETPSVETQPSNDVSKEERPELVKKVYKWNTKEEAKQAFKELLKEK
GVSSNASWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETF
QRFLENHEKMTSTTRYKKAEQMFGDQEVWSCVPERDRLEIYEDVLFYLAKKEKEQAKQLR
KRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRA
LEKEEEDEKQKTLLRERRRQRKNREAFQKFLDELHDHGQLHSMSAWMEMYPTVSADIRFN
NMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEINTGFEEFGSVISSDK
RATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKEAAFKSMLKQATPPLEPEATW
EGVRERFLKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSR
SRSGSESEDDEYHSKKKKRSTSKSPSEHSSSGESERSYKKSKKHKKKGKKRRHKSASPES
EGEKERKGREKEKDKENDKSRGKSRGESKQKSPKRKSAKEEGGWDTSGSELSEGELEKRR
RTLLEQLDAP
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatggggccaccaggaatcccgcctcacttccctccaatgggaatgccacccatgggt
cagaggccgcctagcatggcccccatgcccccaggaataatgccgcccatgatgccccca
atgggagctccacccatgggacagatgccagccatgatgccaccaatgatgccaggaatg
atgatgcctccccgtttgccagctgcatcaatccagcctacaggaccgcctggcgtgagt
ccagttgagtctgcagcgccggctgctcccggaacaacaagcacatcaaccgagtcttca
cctgatgaacagccgaaaaagaagtcagtatggaccgagcacaaatcactggatggaaaa
acatattactacaacacagagaccaaacaatccacatgggagaaacccgatgaactcaaa
tcacctgcagagcaaatgttgtccaagtgcccatggaaagaatacaagtcagataccgga
aagccctattactataactcacagaccaaagagtctcgctggactaaacccaaagagctg
gaggacctggaggcgatgataaaggcggaggaaaatgggacggctgatgttgtggctcct
ggcaccacccctgctcttacgtctcagagcgagtcttctgttactgtggcggcagttgct
gagacagaggctaccatggcgacaggcacctcagaggaacagccagctcacgtgcctgcg
caggttgctgagatcagcagtgatgtcactgttaactccactgaggaaacgcccagcgta
gagacacaaccaagtaatgatgtttctaaggaggagagacctgagctggtgaagaaagtt
tacaagtggaacacaaaagaggaggccaagcaggcctttaaagaattgctgaaagaaaag
ggtgtttcctccaatgcatcatgggagcaggcaatgaagctgataattaacgaccctcgt
tacagtgctctgcccaagctgagtgaaaagaaacaggcgttcaatgcttataaagtccag
acagagaaagaggaaaaggaagaagccagaatcaaatacaaggagtctaaagagactttc
cagcgctttctggagaaccacgagaagatgacttcaaccacacgatacaaaaaagcggag
cagatgtttggcgatcaggaggtgtggtcatgtgttccagagagagacaggctggagatc
tatgaagatgtgctcttctatctggcaaagaaagagaaggaacaagccaagcagctgagg
aagaggaactgggaggcgctgaagaacattttggacaatatggccaatgtgacatacaga
actacgtggtctgaggcacaacagtacctgctggacaaccccacatttgctgaagacgag
gagctacagaacatggacaaggaagatgcgttgatctgttttgaggaacacatccgtgct
cttgagaaagaagaggaagacgagaaacagaaaactctgctgcgagagagacgccgacag
cgcaagaacagagaggccttccagaaattcctggatgagcttcacgatcatgggcagctg
cactccatgtctgcctggatggagatgtatccaaccgtcagcgctgatatccgcttcaac
aacatgctgggccagccaggctccacccctctggacttattcaagttttacgtggaggat
ctgaaagctcgttaccatgacgagaagagaatcataaaagacatcctgaaggataagggc
ttcctggtggagatcaacacaggctttgaggagtttggctcagtgatcagctctgataaa
cgtgccaccacgctggatgcaggaaacatcaaactggccttcaacagtttgctcgagaag
gctgaagcacgtgagagggagagagagaaagaggaggccaggaagatgaagaggaaggag
gcggcatttaagagcatgctgaaacaggccacgccccctctagagcctgaggccacatgg
gagggagtacgagagaggttcctaaaagagcctgcatttgaggacatcactctggagtct
gagaggaagaggatattcaaagacttcatgcatgtactagagcacgaatgtcagcatcat
cactcaaagactaaaaaacactccaagaaatccaagaaacaccacagaaaacgttcccga
tctcgatcaggctcggagtcagaagatgatgagtatcactcgaagaagaagaaacgctca
acatctaaatctccgtctgagcactcttcctctggggaatctgagagaagttacaagaaa
tctaagaaacacaagaagaagggaaagaaaagacgacacaaatcagcctcccctgagtct
gaaggagagaaagagcggaaaggaagagagaaagagaaggacaaagagaacgacaaatct
agagggaaatcacgtggagagtccaaacagaaatcccccaaaagaaagagtgcaaaagaa
gagggtggatgggatacgtctggtagcgaactgagtgaaggagagctggaaaagaggaga
cgcactctcctggagcagctcgacgcaccataa
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