Chanodichthys erythropterus (predatory carp): 137035920
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Entry
137035920 CDS
T10334
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137035920 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137035920 (mid1)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137035920 (mid1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137035920 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
Pur_ac_phosph_N
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
PRY
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
137035920
NCBI-ProteinID:
XP_067265830
LinkDB
All DBs
Position
14:11020002..11066965
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AA seq
673 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCSSFDESSKPYSAFQCPTC
RYVITLDQQGLDGLKRNVTLQNIIDRFQKASLSGPNSPTETRRCQFPPAVDDGRAMSSPC
EAVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDARLRGLA
CPEHGEEKVNMYCVTDEQLICSLCKLVGHHREHQVAALGERFDKLKQMLDSNLSNLIKRN
SELENLMGKLIQTCQHVEHNAAHQESKLTEECDTLINIVQQRRQIIGTKIKEGKVVRLRK
LAQQIANCKQFVERSSSLIAQADQALKETDHARFLQTAKSISERVSMATASSQVLIPEIN
LNDAFDAFALDFSREKKMLEGLDYLTAPNAPTIREELCTASHDTITVHWTSEDEFSVVSY
ELQYTISTGQANVVSLCNSMDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAMNQAGSRSS
PPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDEASSMKSHAQDRFGGTGNYGVTGNV
YIDSGRHYWEVLIGGSTWFAIGIAYKSAPKHGWVGKDSASWVLSRCNTSWAVRHNSKEFP
IEPSPHMRRLGVLLDYDSGSLAFYDAAGTQHLYTFDIAFSQPICPVFSVWNKCLTVLTGL
PIPDHLEISDPHD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgcccaatctgtctggagcttttcgaggatcct
ctgctgctgccctgcgcccacagcctgtgcttcaactgcgcccaccgcatcctggtgtcc
cactgcagctcattcgacgagtccagcaaaccgtactccgccttccagtgtcccacctgt
cgctatgtcatcaccctcgaccagcagggtctagacggcctcaagcgcaacgtcactctg
cagaacatcatcgaccgcttccagaaggcctctctgagcgggcccaactcgccgaccgag
acccggcgctgccagttccctccggccgtggatgacggcagggccatgagttcaccgtgc
gaggcggtgcagtgccagttctgcgagcaggacccgccgcaggaggcggtgaagacctgc
gtcacctgcgaggtttcctactgccaggaatgcctgcgtgcgactcaccccaacaagaag
cccttcaccggacaccggctgacggagcccgtgccggacgcgcgtctccgaggactggcc
tgtcccgagcacggagaggagaaggtcaacatgtactgcgtgacggacgagcagctgatc
tgctctctgtgcaagctggtggggcatcaccgcgaacaccaggtggcggcgctgggggag
cgattcgacaagctgaagcaaatgttggattccaacctcagcaatttgatcaagaggaac
agcgagctggaaaacctcatggggaagttgatccagacgtgccaacatgtggagcacaac
gcggctcatcaggagagcaaactgacggaagagtgtgacacgctgatcaacatcgtacag
cagaggagacaaatcatcgggaccaaaataaaagagggaaaagtggttcggctgagaaag
ctagctcaacagatagctaactgcaaacagtttgtggagagatcgtcctccctcatcgct
caagcggatcaggctctgaaagagaccgatcacgctcgattcctacaaactgcaaagagc
atctcagagagagtctcaatggcaacagcgtcctcacaggtcctgattccggagatcaac
ctaaatgacgcgtttgacgcattcgcactggacttttccagagagaagaagatgctggaa
ggtctggattatctcacagctccgaacgctcccaccatccgtgaggagctttgcacggca
tctcacgacaccatcacagtccactggacatcagaggatgaattcagcgtggtttcatat
gaactccagtataccatctccaccggccaggctaatgttgtcagtctgtgtaactcgatg
gacagctggatgatcgtgcccaacattaagcagaaccactacaccgttcacggcctgcag
agcggaaccaggtacatcttcatcgtgaaggccatgaatcaggccgggagccgcagcagt
ccgccgggaaaactcaagacaaacagtcagccgtttaagcttgaccccaagtcggctcac
aggaagttaaaggtctctcatgacaatctgacggtggagcgggacgaagcctcgtccatg
aagagccacgctcaggaccgcttcggcggcacggggaactacggcgtcacggggaacgtg
tacattgacagcgggcggcactactgggaggttctgatcggagggagcacatggtttgcc
attggcatcgcatataaatctgctcccaaacacggctgggtcggtaaggactcggcgtcg
tgggtcttgagccgctgcaacacttcgtgggccgtgcgtcacaacagtaaagagtttccc
atcgagccgtcccctcacatgcggcgtctgggcgtcctgctggactacgactccggctct
ctggcgttctacgacgccgcgggaacacagcacctctacaccttcgacatcgccttctca
cagcccatctgccccgtcttcagcgtgtggaacaagtgcttgaccgtcctgacggggctg
cccattcctgaccacttagagatcagtgacccgcacgactga
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