Chanodichthys erythropterus (predatory carp): 137035979
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Entry
137035979 CDS
T10334
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137035979 (scn1laa)
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137035979 (scn1laa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
137035979
NCBI-ProteinID:
XP_067265954
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All DBs
Position
14:16138402..16198648
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AA seq
1951 aa
AA seq
DB search
MAHILTPPGPKSFRKFTRESLKAIESRIAEENKKSKDKRERIKDDECERKPNSGLEAGKC
LPFIYGDIPRGMVSTPLEDLDQFYINQTTFIVVNKKKTITRFNATPALYIFSPFNPLRRI
SIKVLVHSLFSMVIMFTILFNCAFMVYTQPPDWAKNVEYAFTGIYTFEALIKIVARGFCV
GQFTFLRDPWNWLDFIVIVMAFVTEFINIGNISALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTLFCLSVFALVGLQLFMGVLKHKCVFYNSSIIPDKPEECYNSTICKA
YINDRSNHYVPTGKKDALICGRSSDAGHCPEGFVCLKASPNPDYGYTSFDSFGWAFLSLF
RLMTQDYWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQNQAAIDE
ALKKEEEFNAMLEQIMRQEEEAQVCWAEAEAEAEASKCEGLSGERTDSSSDASKLSSKSA
KERRNRRKKRQRQGDGEKEEDSRREGNDRKSSFRFTADGNIRCSRERTYTSPHQSPRSFQ
GSILTPRRGSKGSVFSFRGRVHSENNYADDEQSIIEETGSRRDSLFLPSRSERLYSKSSL
TPRILLPSNGKARYVVDSSGMVMVSVDGASSPNSPSGILTPEVSRKKATFDENEEHRHRS
DSQRFSVAFRHDQSARQRALSVASVSNPDSLEVWKQKCVEWWLEFAENYLIWDCSPTWLR
IKNIVHMVVMDPFADLFITICIVINTVFMAMECHPMDQAYSNMLTTGNMVFIGIFTAEMI
FKIIALDPYTYFQEGWNIFDSIIVTLSLLELCLEGKGFLRPFRLLRVFKLAKSWPTLNML
IKIIGNSLGALSNLTLVLAIIVFIFAVVGTQLFGKNYRDCVCRISEDCTLPRWHMSDFFH
SFLIVFRVLCGEWIETMWDCMQVAGQPLCLIVFMMVMVIGNLVVLNLFLALLLSSFSADN
LTANDEEIEKNNLQIAVGRIKRGFAFVKACLQSFFRSGCIRRKKQKKKTPDGNMITNCKG
INDNSNHTTLELVKGAGGTDVDSDSENFISNPSLTISVPMAAEESDFECLNTEDFSSLSS
DLEEVREKLSDVAPSSSEGSTVDIRHLGKEGEDVLDLELEESADPEACFTAGCVRKFPCC
QVDTEKGIWQKWWLLRQTCYNIVEHSWFETFIVFMILLSSGALAFEDIYLEKRKNVKTIL
EFADKVFTYIFILEMLLKWVAYGFAKYFTNLWCWLDFIIVDVSLISLVANALNYSELGAI
KTLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNFFAGK
FNECVNITTDQRMSVADVFNKTECYSWVENVTYWRTLKINFDNVGNGYLALLQVATFKGW
MPIMYAAVDSRGVEEQPEYEVNLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNKFQGFIFDLVANQAFDIFIMVLIALN
MVIMMVETEDQTTEMGNVLYWINLVFIVLFTGECVLKMISLRHYFFIVGWNVFDFVVIIL
SIVGMFLAEVIKKYFFSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKKSGGIDDMFNFETFGNSMLCLFQITTSGGWDGLLAPML
NSKPPDCNPEKKDCGNPPIGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSE
DDFDRFYEVWEKFDPKATQFMEYGKLSDFANSLDPPLRIPKPNRLQLMSMDLPMVSGDRI
HCLDILFAFTKRVLGEGGEMDMLHGQMEERFMASNPSKSSYEPITTTLRRKHEEMSAAVI
QRAFRNHMVRHSMKKVRNVHRETKQQNGKVPSKESVDNDKCNNTTASEDSDATPATSSPP
SYDSLAQNVKNKYQKDKHEKEVEDKGNRVKK
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggcacatatacttactccaccaggacctaaaagtttccgtaagttcacccgtgaatct
cttaaggccatcgagagccggatcgctgaggagaacaagaagtccaaggataagcgggag
agaattaaagacgatgaatgcgagagaaaacccaacagtggcctggaggccgggaaatgt
ctgcccttcatatatggagatattcccagaggaatggtgtccacaccactggaggacctg
gaccagttctacatcaatcagacaacttttatagtagtgaacaaaaaaaagacaatcacc
cgtttcaatgccactcctgccttgtacatcttcagccccttcaaccctctgaggagaata
tcaattaaggttttggtacattcgttgttcagtatggttataatgttcactatactgttc
aactgcgctttcatggtctacacacaacctccagactgggccaagaatgtagaatatgcc
ttcactgggatatacacctttgaagcgctcataaagatcgtcgccaggggattctgtgtg
ggacagtttacgttcctcagagacccgtggaactggttggattttattgttattgtcatg
gcgtttgtaacagagtttataaacataggcaatatatcagctctccgcacgttcagggta
ctcagagctttgaaaactatttcagtaattccaggcctgaaaacaatcgttggagctctg
atccagtcggtgaagaaactgtcagatgtgatgatcttgacccttttttgcctaagtgtc
ttcgctttggtcggactgcaactgttcatgggagttcttaaacataaatgtgtgttctac
aattcttctattattcctgataagccagaggagtgttacaactcaaccatctgcaaggca
tacattaacgatcgtagtaaccattatgtaccaacaggaaagaaagatgctctgatctgt
ggaagaagcagtgatgctgggcattgtccagaaggatttgtctgtctaaaagcaagtcct
aatccagattatggttacacaagttttgattcctttggctgggccttcctttccttattc
agactgatgactcaagactactgggagaatctttaccaacagactcttcgagccgcagga
aaaacctacatgatttttttcgtgctggtcattttcttgggttccttctacctggtgaac
ctgatcttagctgtggtggccatggcatatgacgaacaaaaccaagccgctattgatgag
gctttgaagaaagaagaggagtttaacgccatgcttgagcagatcatgagacaggaagag
gaagctcaggtctgttgggctgaggctgaagctgaggctgaagcgtccaagtgcgagggg
ctcagtggagaaagaacggacagttcctcggacgcctccaaactcagctccaaaagtgca
aaagaacgacgcaaccgcaggaaaaagagacagcgtcagggggatggagagaaagaggag
gattcgaggagggagggaaacgatagaaagtccagcttccgttttacagccgatggaaat
atacggtgttcacgtgaaaggacatacacgtctccacatcagtccccccggagttttcag
ggttcaatcctcaccccacgccggggcagcaaaggtagcgtcttcagcttccgcgggcgt
gtgcattccgaaaacaactacgccgacgatgagcaaagcatcattgaggagacgggcagc
cggagagactctttgtttctaccctctcgatccgagcgtctttacagcaaaagcagtctg
acgccacgtattctgttgccgtctaacggaaaagcgcggtatgtggtcgacagcagtggc
atggtgatggtgtcagttgatggagcctcttcacccaactcaccgtctggaatactgaca
cccgaagtgtccagaaaaaaagccacatttgacgaaaatgaagaacacagacaccgaagt
gattcacagcgcttttcagtggcttttcgacatgaccaatcagcgagacagagagctttg
agtgtagcaagtgtcagcaaccctgactcgttggaggtctggaaacagaagtgtgtggag
tggtggctcgagtttgcagagaattatctgatctgggattgcagtcccacgtggctgagg
ataaagaatatcgtccacatggttgtaatggacccctttgctgatctgtttatcaccatt
tgcattgtgataaacacagtattcatggccatggagtgtcaccccatggaccaggcttat
tctaatatgcttacaactggcaacatggttttcataggcatcttcactgcagaaatgata
ttcaagataattgccttggacccatacacttactttcaggaaggctggaatatcttcgac
agcatcatagtcacactgagtcttctggaactttgtttggaaggaaagggttttcttagg
ccattccgactgctgagggtcttcaaactagccaagtcctggccaactctgaacatgcta
atcaagatcattggcaactcactgggtgccttgagcaacctgacgcttgtgctagccatc
atcgtcttcatcttcgctgtggtgggcacgcaactgttcgggaagaactacagagactgt
gtgtgtaggatttctgaggactgcacgcttcctcgctggcacatgagcgatttcttccat
tcgttcctgatcgtctttagggtgttgtgcggggagtggatcgagaccatgtgggactgc
atgcaagtagcgggacagcctttgtgcttaattgtgttcatgatggtcatggtgatcgga
aatctggtggttctgaacctgttcctcgctctgctgctcagttccttcagtgccgacaat
ctcacggccaatgacgaggagatcgaaaagaacaacctgcagatagcggttggtcgaatc
aagagaggcttcgcttttgttaaggcctgcctgcagagtttcttccggagtggctgtata
aggaggaagaagcagaaaaagaaaactccagatgggaacatgatcacaaactgcaaggga
ataaatgataactccaaccacaccacactagagctggttaaaggcgctggaggaacagat
gtggatagtgactctgagaattttatcagcaacccgagcttgaccatcagtgtcccaatg
gccgccgaggagtctgattttgagtgcctcaacactgaggatttcagcagtctttcttcg
gacctagaggaggtaagagagaagctgtctgacgtggctcccagctcttcagagggcagc
acggtggacatcagacacttgggtaaagaaggagaagatgttttggacttggaacttgag
gaatctgcagatccagaagcttgtttcacagcaggctgtgtccgtaagttcccgtgctgc
caggtggatactgaaaagggcatatggcagaaatggtggctgctgagacagacgtgctat
aacatagtggagcacagctggtttgagaccttcatcgtcttcatgattctgcttagcagt
ggcgctctggcttttgaggacatttatcttgaaaaaaggaaaaacgtaaagactatactg
gaatttgctgataaagttttcacctacatcttcattcttgagatgctgctgaaatgggtc
gcttatggatttgccaaatacttcaccaatctctggtgctggctggattttattattgtt
gatgtctctctgatcagcctggtggccaacgccctgaactattcagagctgggcgccatc
aaaaccctacgaacgctgagagccttccgacctctccgagctctctcacgcttcgaggga
atgagggtggttgtgaacgctcttcttggtgccattccctccatcatgaacgttctgctg
gtctgtctcatcttctggctcatttttagcattgtgggcgtcaacttctttgctggaaag
tttaatgaatgtgtaaacattaccacggaccagcgcatgtctgtcgcagatgtctttaac
aagacagaatgttacagttgggtagagaatgtaacctactggagaactctgaagatcaac
tttgacaatgtggggaatggatacctggccctgctacaagtggccacctttaaagggtgg
atgcccattatgtatgcagcggtagactctcgcggtgtagaggagcagccagagtatgag
gtgaatctgtatatgtacctctattttgtcatcttcatcatctttggagcttttttcaca
ttaaatctcttcattggcgtcatcattgacaacttcaaccagcagaagaaaaagtttggg
ggtcaggatattttcatgacagaagagcagaagaaatattacaacgcaatgaagaagctc
ggctcaaagaaacctcaaaaacccattccaaggccaaaaaacaaatttcaaggattcatc
tttgaccttgtagccaatcaggcctttgacattttcattatggtccttattgcgctcaac
atggttattatgatggtggagacggaagatcagaccacagaaatgggcaacgtgctgtac
tggatcaatcttgtcttcattgtgctcttcactggtgaatgtgtgctaaagatgatctca
ctacgacactacttcttcatagttggctggaacgtatttgactttgtcgtcatcatcctg
tctatagttggcatgttcctggcagaagtcattaagaagtactttttctcaccgaccttg
tttcgtgtcattcgcctcgcccggattggccgcgtactacgtctaatccgaggtgccaag
ggaatacggacccttctgtttgcattaatgatgtcacttcctgctcttttcaacatcgga
cttctgctcttccttgtcatgttcatctatgccatcttcggcatgtccaattttgcctat
gtcaaaaaatcaggcggcatcgacgacatgttcaactttgagacgtttggcaacagcatg
ttgtgtttgtttcagatcaccacctcgggaggttgggacggccttctggcacccatgcta
aatagcaaaccaccagactgcaatccggagaaaaaagactgcgggaacccgcccatcggc
atttttttcttcgtcagctacatcatcatatgcttcctgatcgtggtgaacatgtacatc
gccgtcatcctggagaacttcagcgtggccaccgaggagagcgccgaacctttgagcgaa
gacgattttgacaggttttacgaggtttgggagaagtttgacccgaaagccacgcagttc
atggagtacggcaagttgtcggacttcgcaaattcgctggatcctcctttgcgaataccc
aaacccaaccgactgcagctaatgtcaatggatttgccgatggtgagcggcgatcgcatc
cactgtctggatatcttgttcgctttcaccaagcgcgttcttggggaaggaggcgagatg
gacatgctccatggacaaatggaagaacgattcatggcctccaacccatccaagtcctca
tacgagcctataaccacaactctgcgcaggaagcatgaagaaatgtctgctgcagtcatt
cagagagccttcaggaaccacatggtccgacatagtatgaagaaagttcgtaatgtccac
agagagactaagcagcaaaacggaaaggtgccgagtaaagagtctgtggacaatgacaag
tgcaacaataccaccgcttcagaagactctgatgcaacgcccgccacatcctctccacca
tcgtatgatagtctggcgcagaatgttaaaaacaaataccaaaaggacaagcatgaaaag
gaagtggaggacaaaggtaaccgagtgaaaaagtag
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integrated database retrieval system
