Chanodichthys erythropterus (predatory carp): 137036157
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Entry
137036157 CDS
T10334
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
137036157 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137036157 (ddx3xa)
03041 Spliceosome [BR:
cery03041
]
137036157 (ddx3xa)
03036 Chromosome and associated proteins [BR:
cery03036
]
137036157 (ddx3xa)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137036157 (ddx3xa)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137036157 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
137036157 (ddx3xa)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137036157 (ddx3xa)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137036157 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
137036157
NCBI-ProteinID:
XP_067266278
LinkDB
All DBs
Position
14:32295243..32313237
Genome browser
AA seq
784 aa
AA seq
DB search
MSHVVVDGSHGLEQQLAVLDLNSADGQGVGTGRRYIPPHLRNKDVSQNAGNAYSSGRQSG
YSVAPVQSFSPKQYPQSWHPEGNQRYRHNCPTGWNDFRTGSQRYPSQELSFYHTYTSGWP
DRCDSPGWDVGRSNGFVNGYHDGRMNGTANFGRGPPRNDRGGRGSFRGSRNGGSFNQPMH
NAGYGTYENKDGGWNSVVNRDAYTSFGGRSDRGKSAFFNDRGAGSRGRYERGGFGGGTGG
NSRWVEESRDEEDWSKPMPPNERLENELFSGSNTGINFEKYDDIPVEATGTNSPGHIESF
HDVDMGEIVMGNINLSRYTRPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPVLSQI
YTDGPGEALQATKASAQQENGKYVRRKQFPISLVLAPTRELALQIYDEARKFAYRSRVRP
CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGF
EPQIRRIVEQDTMPPKGARQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQ
KVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ
RDREEALQQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGN
LGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGA
RDYRQMAGGGNTFGNRGARNAGGHGGNRGFGGNKGGFGSFGSDSYGGNYGNYGGNYAQVD
WWGN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgacggttcacacggtctagagcagcagcttgctgtcttagac
ttgaactcagctgatggacagggtgttggcactggtcggcgttacattcctcctcatttg
agaaacaaagacgtatcacaaaatgcaggaaatgcttattcctctggtagacagagcggt
tattcagtggcaccagtacagagcttttctcccaaacagtatcctcagagttggcaccct
gagggaaaccaaagatacaggcataactgtccaactggatggaatgactttaggaccggt
tcccagagatatccgtcccaggagctctcattttatcacacctacactagtggctggccg
gacagatgtgattctccaggatgggacgtcgggcgtagcaatggtttcgtcaatgggtat
catgatggtcgtatgaatgggactgcaaactttggccgtggacctcctcgcaatgacaga
ggaggacgtggtagctttcgtggaagcaggaacggaggttccttcaaccagccaatgcat
aatgcaggttatggcacttatgagaacaaagatggagggtggaactcagtggtgaacaga
gatgcctacactagctttggtgggcgttctgacagagggaagtctgcgttcttcaatgac
aggggagctggctcaagaggaagatatgagcgtggaggctttggaggaggaacgggaggg
aacagtcgttgggttgaagagtccagagatgaagaggactggtcaaaaccaatgccccct
aatgagcgtctagaaaatgagctgttctctggcagcaacacagggattaactttgagaag
tatgatgacattcctgtggaggccactggaacaaactctcctgggcatattgagagtttc
catgatgtggacatgggcgagatcgttatgggcaacatcaacttgagccgctatacacgc
cctacccctgttcagaagtatgcaatccccatcatcaaggccaagagggacctgatggcc
tgtgcacaaacaggctcggggaagactgcagccttcttgcttcctgttctcagtcagatc
tacactgatggacctggagaggcactgcaggccaccaaagccagtgcccagcaggagaat
ggaaagtacgtccgtcgtaagcagtttcccatttctctagtcctggctccaaccagagaa
cttgctcttcagatttatgatgaggccagaaagttcgcttatcgctccagagtgcgcccg
tgtgtagtatatggaggcgcagatataggccagcagatccgtgatttggaaagaggctgt
cacctgctagtggccacacctggtcgtctggtagacatgatggagcgaggcaagattggc
ctggactactgcaaatatctggtgttggatgaggcagacagaatgcttgatatgggtttc
gaaccccagatcagacgtattgtggagcaggacactatgcctccaaaaggtgctcgtcag
accatgatgttcagtgccaccttcccgaaagagatccagattctggcccgtgactttctg
gatgagtacatcttcctggctgtgggccgcgtgggctccacttcagagaacatcacccag
aaggtggtttgggtggaagagaatgacaagcgctccttcctccttgacctgctcaatgcc
acaggcaaggattctctcacactggtgtttgtggagactaagaagggtgcagatgctctt
gaggacttcctctaccgcgagggctatgcctgcaccagtatccatggcgaccgctctcag
cgtgatcgtgaggaagcgctccagcagttccgctctggacgctgccctatcatggttgcc
actgctgtggctgcacgtggcttggacatctccaatgtgaaacacgtgatcaattttgac
ttgcccagtgacattgaggaatatgtccaccgcattggtcgtacaggccgtgtgggaaac
cttgggctggccacatccttctacaatgataagaacagcaacatcactaaagatctgctg
gacatcctggtggaggccaaacaggaggtgccctcctggcttgagaacctagcctacgag
caccagcacaaaagcaccaaccgtggacgacccaaaaggttctctggtggctttggggcc
agggattaccgccagatggctgggggtgggaatacttttggcaaccgtggtgctcgcaat
gctggtggccatggagggaacagaggttttggaggcaataagggtggctttgggagtttc
ggcagtgacagctacgggggcaactatggaaactatggaggaaactatgcccaggtggac
tggtggggcaactaa
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