Chanodichthys erythropterus (predatory carp): 137036163
Help
Entry
137036163 CDS
T10334
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137036163 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137036163 (lmo7a)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137036163 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
137036163
NCBI-ProteinID:
XP_067266300
LinkDB
All DBs
Position
14:complement(24465554..24504951)
Genome browser
AA seq
1673 aa
AA seq
DB search
MSEIKEYRRSLVLTPKTTTPFNQFLPTKDKQSGYVPAPLRKKRAERNEDNRRSWASPMFT
EDDGTFSSHERAGSDPSSITGLKSQTTAHQSLAYEYESSDSDADRPDPDVVLDDLASRRF
HSPSPVAPTNFALPMSPLEAAAVSCTSRSQVTVSNVPRQSLTHLSNQSQPLQRTYRRPVS
TDACIYDDSEEEDDEFGYADPVQDDLYARKVGLMPQTSATEPFDKFLPKFWTPEEDAHVK
MIKLGSQRRPWYRKIQGFSRKKSGSSSEESDGDINPWLSVPTFSRTQSEPPSSHSHAPEG
LAQSSLTSTPSSQTQHLTVAQQSAGLSMLKPPDFWPRPDPASGPRLIKCEKHPLLGREHP
NDPYNVSADILPDLENDDMFTRRTKAFHSSDDLAKLKYGNFLVPRRRSEADVTVVIQPRH
EGEPVYPDIEKDDVVFRRAQQQICHRPLSGAPDNYHPVPIPETWALPPKLQAKLMCVPIE
PRQSKSKPEIKHREKQHLKTDDMLLRKLKALNTQGMEEKGSPSVSLSCNEEDMQKWQAIR
EASRVRYRKRLMVERLLQKSSDSKGSKSVSDITDSETKLSPSTIELRFEELQKMRARLKE
NEDKWQDDLTKWKNKRRSVNSDIVKKKEEREQIEQITSSSARKSKTFKEMQDGREGREQS
DFRDRFNSSVDDVFEDPVPRSRTLPARSYTIDVPYAPTDKPSLPSIPSLREKEPVAGTLA
SDQTDFPTKPDRSSPDIPISMNYSIQESKTTTQNLLDDPVPAFSDSLIKPTSMIKPISVS
KPSSVLNSSDLISNTKPVENSSSPISSLYKPNSMDTKQSGLDQVSASLPRSYQRSDSARL
PSVVTPRPFGTQANRITSLPRAFTMDDSLKRTNGETDSLKKTTVSNRYAQYVKEDDDISQ
ESSKHSSDEDERSEERTPSPVPLVNKVSPLPKSSFPLAPPNEVDYSEMRISLNQKPNSSR
DFGFQNDWDSTGVRVKSVVPGSTAEHGQVKVGDEILTVNGHRVADMSYNEWKSSMEEALQ
QGSLLMDIRRHGKNSPSEPYLSTNLDFTSQQTKDNVVKTVNVSSQPGNNHGSNGINGGFR
EDPENVNNKESESISMKNLKRRSEFFEQGSAGLTVSSLVYLCGGSDTAISNLPMPSITTS
TTRWSWDPEEERRRQEKWQKEQERLLQEKYKKDQEKLDEEWRKAQQDLVKGGSKHYEEEM
ELDRHNLYSPLSSIRQPTVSWEEQEASRLAQQEEERKKREEERLRLEDEKKREKERLQLE
EERRKQEEKERLEEERKREEEKRKKREEERQRLEEERIKREEERLWLEERRKKEEQERLE
EQRRKREDEERLLQEKERNRREEERRRLEEQKRFQDQDKVDSFGYTNVYPELSYSHRSIS
KSTPELDEVAKPDIKGVYSRHRGLAGWLLEEELRRKKNPQIQRKQAASELELERRSILNA
MKYRDPERASSGLGEVSRDYKKEPLTQAEVERQQILQEMKKKTSLNTDNSWIRQQSSASV
TAKEPVDLPMRRGESLDNLDMPRSSWRSSWSTSNSTSLIPDYSRPHSALSGSSSYYSGRP
GSATLPASQSMSSLKQSWSPSPTTPEPEPQAPLRNRSVSGRKICSFCNTPLGKGAAMIIE
SLGLCYHLNCFKCSDCKSDLGGSQAGAEVRIRNQQLYCNSCYMRLKTGQPTSM
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaattaaggaataccgccgttcgttggtcttaacccctaagaccaccactccg
ttcaatcagttcctgccaacaaaggacaagcagtcgggctatgttccagcaccattacgc
aagaaacgcgctgagcgaaatgaggacaacagaagaagctgggctagccctatgttcaca
gaagatgacggcactttttctagtcatgagagggcaggttcagacccttcatctatcacc
gggttgaaatcccagacaactgcccaccagtctttggcctatgagtatgagagcagtgat
tcagatgcagatcgtccggatcccgacgtggttctagatgacctcgctagccgtagattt
cacagcccatcccctgtcgctccgaccaactttgccttacccatgagcccgctggaggca
gctgctgtctcgtgtacctccaggtcacaggtgactgtcagtaatgtgccccggcagtca
ctgacccatctcagcaatcagtcacagcctcttcagaggacttacaggaggcctgtatcc
actgacgcctgcatttacgatgactctgaagaagaggatgatgagtttggctatgctgat
cctgttcaagatgacctttatgcccgtaaagttggcctgatgccccaaacatctgccaca
gagccttttgataaatttctgcccaagttctggacacctgaggaggatgcacatgtgaag
atgatcaaactgggctcccagcgccgcccttggtacaggaagatccaaggtttcagtcgc
aagaagtcaggttcgtcctctgaagaatcagatggtgacatcaatccctggctctctgta
cctactttttctcgcactcagtctgaacccccttcctctcactcccatgcacctgaaggc
ctcgctcagtccagcctcacttccacacccagttctcaaacacaacacctcacggttgct
cagcagagtgctgggctctctatgttaaagccccctgatttttggcccagaccagatcct
gcttctggccccagactcataaaatgcgaaaaacatcccctccttgggcgtgagcaccct
aacgacccatacaacgtttctgccgacatcctacctgatttggaaaatgacgatatgttt
acacgtcgtacaaaagccttccactcgagtgatgatctggccaagttgaagtacggtaac
ttcctggtgcctcgccgcagatcggaggccgacgtcacagtggtaattcagccccgtcat
gagggggaacccgtttatcctgacattgaaaaagatgatgtggtttttcgaagggctcaa
cagcaaatctgtcatcgccctctgtctggggcccctgataactaccaccctgttcctatt
ccagagacatgggctttgccaccaaaactgcaggccaagctgatgtgtgtcccaattgaa
cccagacagagcaaatccaaaccagagattaaacacagagaaaaacagcacctgaagaca
gatgatatgctacttaggaagctaaaagctttaaatacccaagggatggaggaaaagggg
tctcccagtgtttctttgtcttgcaatgaagaagatatgcagaaatggcaagccatcaga
gaggccagccgtgtgcgatacaggaagaggctgatggtggagagactgctccagaaaagc
tctgatagtaaagggagcaaatcagtgagtgacataactgacagtgagacgaagctcagc
ccctcgacgatagagttgcgcttcgaagagctgcagaagatgcgtgctcggttgaaggag
aatgaagataaatggcaagatgatcttacaaagtggaagaataagcgcagaagtgtgaat
tctgacattgtgaagaaaaaagaggagagagaacagatcgagcagatcacttcaagcagc
gccaggaaatcaaagaccttcaaggaaatgcaggatgggagagagggccgtgagcaaagc
gacttcagggaccgctttaactcaagcgttgatgatgtctttgaagatcctgtaccccga
agcagaaccctgccagcacgtagctacaccattgacgtcccttacgctcccacggacaaa
ccttccctaccctccataccatctctaagagaaaaggaacctgtggctggcacgctggca
tcagatcagactgattttcctaccaaacctgatcgctcaagtccagatatcccaatttca
atgaattacagcattcaggagagcaaaacaacaacccaaaaccttctggatgatccagtt
cctgctttctccgacagcctgattaagcccaccagcatgatcaagcccatcagcgtcagt
aaacccagcagcgttctcaacagctcggacttgattagcaacactaagccagttgagaac
tccagcagccccattagctcattgtataagcccaattcaatggatacaaagcagtctggg
ctggatcaagtttctgcctccctccccaggagctaccagagatcagatagcgcaagactc
ccctctgtagtcacgcctaggccattcggcacacaggccaaccgaataacctctcttcct
agagcattcacgatggacgactctcttaagcgcaccaatggagagacagacagcctcaag
aaaactacagtttccaaccgctatgctcagtatgtgaaagaggatgacgatatctcccag
gaaagctctaagcacagcagtgacgaagatgagagatcagaagagagaactccgtctcct
gtccctctggtcaacaaggtgtcacccctgcctaaatcttcattcccgctcgcccctccc
aatgaggtggactacagtgagatgaggatcagcctgaaccagaaacccaacagtagccgg
gactttggcttccagaatgactgggactccactggggtccgtgtcaaatctgtagttcca
ggcagcacagcggaacacggtcaggttaaggttggagatgagatccttacggtgaacggg
caccgggtggcagacatgagctataatgaatggaagagcagtatggaggaggccttacag
caaggaagtctgcttatggacatccgcagacatggcaagaatagtccctctgagccatat
ctcagcaccaacctggatttcacatcccaacaaaccaaggacaatgttgtgaaaactgtg
aatgtcagctcacagccaggcaataatcatggctcaaatgggataaatggaggcttccgt
gaggatcctgagaatgtgaataataaagaatctgaatccatttctatgaaaaacttaaaa
aggagatcagagttttttgaacaaggctctgcagggctcacagtcagttctctggtctac
ctctgtggtggatccgatacagcaatatcaaatcttcccatgccctccatcactacatcc
actacacgctggtcctgggatccagaagaagagcgcagacgacaggagaagtggcagaaa
gagcaggagcgtttgctgcaggagaagtacaaaaaagaccaagaaaaacttgatgaggag
tggagaaaggcacagcaagatcttgtgaaggggggctccaaacattatgaggaggagatg
gagctggacagacacaacctctactcccctctgtcctccatcagacaacctactgtttct
tgggaagagcaagaggcttccagattagcccagcaagaggaagaaaggaagaaaagagaa
gaggagaggttacgtttagaggacgagaaaaaaagagagaaagagaggctgcagttagag
gaagagagaagaaaacaagaagaaaaagagcgtcttgaggaagaaaggaaaagagaagaa
gaaaagaggaagaaaagagaagaggagaggcagcgtttagaggaagagagaataaaaaga
gaggaagagaggctgtggttggaagagagaagaaagaaggaagaacaagagcgccttgag
gaacagaggaggaagagagaagatgaagagcgcctccttcaggaaaaagagaggaacaga
agagaggaggagaggaggcgactggaagagcagaagagatttcaggatcaagataaggtg
gactcctttggctataccaatgtttaccctgaattatcctactcacacaggtcaatttcc
aaatccactccagaacttgatgaggttgcaaaaccagatattaaaggtgtatacagcaga
cacaggggtttggcaggatggctgctggaggaggaattgaggcgaaagaaaaaccctcag
atccagagaaagcaggcagcgagtgagctagagcttgagaggaggagcatcctcaatgcc
atgaaatacagagacccagagagagcaagcagtggtttgggtgaggtcagcagggactat
aagaaagagcctctaactcaggctgaagtggaaaggcaacagatccttcaagaaatgaag
aagaagacttccttgaacacagacaacagctggattcgccagcagagctctgccagtgtc
accgccaaagaaccagttgatcttcccatgaggaggggcgagtctcttgacaacctcgat
atgcctcgttcctcctggagatcatcatggagcacatctaacagcacctcgctcatacca
gactacagccgtcctcattcggccctctctggctcctcatcctactatagtggacgtcca
gggtctgccactctgccggcatctcagtccatgagctccctcaagcagtcctggtctcca
tccccaactacaccagagccagagcctcaagctccactacggaataggtcagtgagtggc
aggaaaatctgttcgttctgtaatacaccactgggcaaaggagcagccatgatcatcgag
tccctggggctctgttatcatttgaattgtttcaagtgctctgactgcaagtctgatttg
ggaggctcacaagcaggagcagaagtcagaatacgaaaccaacagctttattgtaactcc
tgctatatgcgactcaaaactggccaacccacatccatgtga
DBGET
integrated database retrieval system
