Chanodichthys erythropterus (predatory carp): 137037675
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Entry
137037675 CDS
T10334
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137037675
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
137037675
mRNA degradation factors
5'-3' decay
Decapping complex
137037675
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137037675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137037675
NCBI-ProteinID:
XP_067267966
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Position
15:complement(3879459..3890019)
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AA seq
495 aa
AA seq
DB search
MATRMENAGPAVMGLNTHNRQCIGQPKAPSQLGPQTAIAQPGKEPMGPQKPASAFQEGPG
IRFGDDWKRSLQLPDKDNRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEE
SIPIALSGRDILARAKNGTGKSGAYLIPLLERIDMKKDYIQAIVMVPTRELALQVSQISI
QISKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGIAKVDKVQMMVM
DEADKLLSRDFVVLIEDIIGFLAKNRQILLYSATFPISVQTFMAKHLQKPYEINLMEELT
LKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIH
AKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPRNAETYLHRIGRS
GRFGHLGLAINLITAEDRFNLKTIEDQLMTDIKPIPGSIDKSLYVAEFHSVDPDCEVEAE
AEAEAFQPTGGSDAP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaggatggagaatgctggcccagctgtcatggggttgaacacacacaacagg
cagtgtataggacagcctaaagccccctctcaattaggaccccaaactgcaattgctcag
cctggaaaggagcccatggggccccagaaacctgctagtgcatttcaggaaggacctggc
atcaggtttggtgatgactggaaaagaagcctacagcttcccgataaggacaatagagtc
aaaacttctgatgtgactgcaaccaaaggaaatgagtttgaggactactgtttaaagaga
gagctgctgatgggaatttttgagatgggctgggaaaagccctcccccattcaggaggag
agtattcctattgccctctctggacgcgatatactggctcgtgccaaaaacgggacagga
aagagtggtgcatacctgatccccctactagagagaattgacatgaaaaaggattatatc
caggccatcgtgatggttcccactcgtgaactagctctgcaggtcagtcagatcagtatt
cagatcagcaagcacctgggcggtgtcaaagtcatggcaaccacaggggggaccaacctt
cgagatgatatcatgcgcctggatgagacggttcatgttgtaatagcaacacctggaaga
attttggacttgataaaaaagggcatagccaaagtggataaagttcagatgatggttatg
gatgaggctgataagctgctctctcgggactttgtggttcttattgaggacatcattggt
ttccttgcgaagaacagacagatactgctctattcagccacgttccccatcagcgtacag
acgttcatggcaaagcacctgcagaagccctatgagattaatctgatggaggaactgacc
ctaaagggcattacccagtactatgcttacgtcacagaaagacagaaagtccactgcctc
aacactctgttctccaggttgcagatcaatcagtccatcatcttctgtaactctactcag
cgagtggagcttttagccaagaagatcacacagctgggctactcctgcttctacattcat
gcaaagatgatgcaggaatacagaaaccgtgttttccacgacttcagaaatggactctgc
aggaaccttgtttgcacagatttattcactagaggcattgacatccaggcagtaaatgtg
gtcatcaactttgacttccccaggaatgcagaaacgtatctgcatcgcataggacgctca
ggaaggtttggacatctgggtttagcaatcaatctcattaccgctgaggatcgttttaac
ctgaagaccattgaggaccagctgatgacggacataaagcccattcccggcagcatcgat
aagagcctgtatgtggcagagtttcactctgtcgaccctgactgtgaggtggaagcagag
gcagaagcagaggcatttcagcctaccggagggtctgacgccccttag
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