Chanodichthys erythropterus (predatory carp): 137037847
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Entry
137037847 CDS
T10334
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42
KO
K14321
nucleoporin-like protein 2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137037847 (nup42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137037847 (nup42)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137037847 (nup42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_RBM22
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
137037847
NCBI-ProteinID:
XP_067268287
LinkDB
All DBs
Position
15:13963623..13968297
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AA seq
445 aa
AA seq
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MTVCSFFLQGRCRYGDKCWNEHPRDGRGGGGGEYRGNQQQPSRGGYGNRVWINPAQRGGG
EFIQPSSFSRGGNDGSRGGGNDWGRGGGNDRSRGGGNDWSRGGGGGGNDWGRASGNDGSR
GGGNDWGRGGGMSRDFSSQNRFSALSSQSSFDTAGQNAADDNAKHVETIQSDMEVWQTSG
QWPFSCYSVLNKQISGFVEWSPEELRQEYYTYRASGDIQPYVNSVQLLANQWSNRVQELR
TMSRPTQISVISELNNSSPQTPSHGLGSSSIQEFGSTASGFGATSSSTTSGFGAGGFGSG
TQSINSFSFAQSKTDFGAAPDFGGAAFSPAQTAPGFSSPAPSATSFSFAAPAADNQSSSA
AGFSFKTSSAGLGSGFGSSAPPPSGGFGQSGAVFTGAAQAAGNSGGSLFTAQSDLSAEEL
KEFTARRFTLGQIPLKPPPADLLMV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtgcagcttctttcttcaaggtcgctgtcgatacggagataagtgctggaat
gaacatccgagagacggaagaggaggaggaggaggagaatatcgaggaaaccagcagcag
cccagcagaggaggctatgggaaccgcgtgtggataaacccggctcaacggggcggcggt
gagttcatccagccctcctcgttctcccgcggcggtaatgatgggagcagaggcggcggt
aatgactggggtagaggcggcggtaatgaccggagcagaggtggcggaaatgactggagt
agaggcggcggaggtggcggtaatgactggggcagagccagcggtaatgacggaagcaga
ggtggcggtaatgactggggtagaggtggcgggatgtccagagacttcagcagccagaac
agattctcagcgctcagctctcagagcagctttgatacagctggacaaaacgcagcggat
gacaatgcaaaacatgtcgaaacaatccagagtgacatggaggtctggcagacttctggc
cagtggccgttttcgtgttattcggtcctcaacaaacagatctcagggtttgttgagtgg
tctcctgaggagctgagacaggaatattacacctacagagcatctggtgatatacagcct
tatgtgaactcagtccagctgctggccaaccaatggagtaacagagttcaggagctgcga
accatgagcagacccactcagatcagtgtgatctcagagctgaataactccagtccccag
acgccatcacatgggcttggctcgtcaagcattcaagagttcggttcgacagcatcaggg
tttggagccacatcatcgtcaacaacatctggctttggagcaggaggatttggttccggt
actcagagtatcaacagcttcagctttgcccagtccaaaactgactttggagcagcacct
gattttggaggcgctgcgttcagccctgctcagaccgcgccaggtttcagcagtcccgct
ccgtctgccacctccttttcttttgcagcaccagctgcggataatcaatccagctctgca
gccgggttcagtttcaagacgtcttcggcaggattgggcagcgggtttgggtcctcggca
ccgcccccgagcggcggctttggtcagagcggcgctgtgttcactggagctgcacaggct
gctgggaattcaggagggagtctgtttacggcccagagcgacctgagcgccgaagaactg
aaggagttcacagccagacgcttcacgctgggtcagatccctctcaaacctcctcctgct
gacctcctcatggtctaa
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