Chanodichthys erythropterus (predatory carp): 137037895
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Entry
137037895 CDS
T10334
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137037895 (vps50)
Membrane trafficking [BR:
cery04131
]
Protein recycling
Others
EARP complex
137037895 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
137037895
NCBI-ProteinID:
XP_067268378
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Position
15:complement(20973253..21135372)
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AA seq
988 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVVDMSPMESFRSPSQEELRELREQPTDPLAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEEVTTPDDS
SAEGSDESTVDRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSIA
QLHEFKFMGQCRSPSVSPSRQPESTELVELSLFEQYLQGGNPFEMQIDNKEEETEDVLAS
NGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDVPVKSVSRETLRSRKRSDYNLNR
ANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMHF
QSASLPSQGSQPGVSRQTIPDYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGESTGPH
ASPEERKEKVPSPHLSQLVILTASDALYGLAERVVATESLVFLAEQFEFLQPHLDTMMPS
AKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYV
DVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTNLV
TVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgtcccgtcagggcctgaaaagtccccaggagagtgtg
gttgacatgagccccatggagagcttcaggagccccagccaggaagagctgagggaactg
cgggagcagcccaccgatccactggcagaacaggaaatcattgacagcatagaggaagtg
tacttctccagtgattcctttgacatggtgcaatacgagcttgagaaactccctccggat
ctgaaccttctggagcttgaggagtacagagataagctgaagagacaacaagcagctgta
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagcttgag
agagtgacgtctctgcagaccaacctgcagctggctgcagtcatctgcactaatgcacga
aggcagcttcgttctgctaaagaaggcttcaccgaagcaagtcttgggctgttggccaat
cagagacgccggcagctgttgacaggattgctgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctgtgtttagaatgccagaaggccgccagcacattcaaacactacaactgtataagc
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtggcg
ctgtccaaaacctgcaagcactttgatgtttctcactacaccaaagttcaactggcatat
aagcttctaggcaagacacagacggctatggatcagctgcacatgcacttcactcaggcc
atccacaacactgtcttccaggtggtgctgggatacgtagagctgtgcgccggcaacgcc
gacacaaagttccagaagatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgcttagttaccat
ctaaccatgcagtggcacgatgagcactacaaagaggaagtgacgactcctgatgattca
agcgcagagggctcagacgaatctaccgtggaccgtagttatgtgaaaaagaagctggaa
catggcttaacgcggatctggcaggacgtccaattgaaagtgaaagcctatttgctggga
acagacatgtccaacttcaagtacgacgacttcattgtggttctggatgttatcagcagg
ttgatgcaggtaggagaggaattctgcggcagcaagtccgaggtgttgcaggagtccatt
aagagacaaagtgtgaactactttaagaactatcacagaactcgcttggaggagttgcga
atgttccttgaaaatgaaacctgggagttgtgccctgtgaagtccaacttcagtattgcc
cagctccacgagtttaagttcatgggtcagtgtcgttctccctcggtatctcccagcaga
cagccagaatccacagagctggtggagctttctctgtttgagcagtatctgcagggcgga
aatccttttgagatgcagattgacaacaaggaagaggagacagaggatgtcctggcttct
aatgggtatgagtcagatgagctggaaaagagtgtgtatcaggactacgacagtgacagt
gatgtacctgaggagctgaaacaagactatgtagatgagcagacaggagacgttccagtg
aagagcgtgtccagagagacacttcgcagccggaagaggtccgactacaatctgaaccga
gccaatgcccccatccttaccaacaccaccctcaacgtgattcgcctggtcgggaaatac
atgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgtgtgtctcaa
ctctttgattactatctgtatgccgtctacaccttctttggccgcaatgacatgcacttc
caatctgcatctctgccttcacaaggctctcaacctggtgtttccagacagacaatccct
gattattggtatgaatcatctgggctgggtttgatcagcagcagactgaggactacgctc
agccgaatccaggagagcctaatagacgtggaggctggaggggagagcacaggtcctcat
gcatctcctgaggaaaggaaggagaaggtccccagtcctcatctcagtcagctggtgatc
ttgacggctagtgatgcgctctatggcttggctgagagagtcgtcgccactgaatcacta
gtttttctggcagagcagtttgagttccttcagcctcatctcgacaccatgatgccttca
gccaagaagcccttcctccagcagttctactcacagactgtatctacagccagcgagctc
cgcaaacccatttactggatcgtggcagccaaagccatagattacgaacagatgctgtta
ctgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaacatctatgtg
gatgtccttttaaaggagtttgagaagttcaaccaaagactgggagatgtgtcgaaaata
gttcggattcctttgcctgtgtccaatgtcttatgggagcactgcatccgtctggccaac
aggacattagtggagggctatgctaatgtgaagaaatgcagtaatgaaggacgtgcactg
atgcagctggactttcagcagttcctgatgaagctggagaagctcaccgacctcagacca
attccagacaaggagtttgtcgagacctacatcaaagcatactacctaactgagaatgac
atggagcagttcatcaagaaccacagggagtactcaatgaagcagctgactaacctggtc
accgtctgcctcggatcccacatcaacaagaaagcacgacagaaactcctcgcagctatc
gatgacattgaccggccgaaaagataa
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