Chanodichthys erythropterus (predatory carp): 137037896
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Entry
137037896 CDS
T10334
Symbol
col22a1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
137037896
NCBI-ProteinID:
XP_067268381
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All DBs
Position
15:complement(8971051..9040161)
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AA seq
1622 aa
AA seq
DB search
MEFRFGLKISLVLAILALTLYGSGVEGQRAGCKNVHYDLVFILDTSSSVGKENFEKIRQW
VANLVESFDVGAEKTRVAVVRYSDRPTAEFNLGRYKTLEEVKRAAGNIRYLGGNTKTGDA
ISFTTNNIFTERTGARPAAKGIQKVAILLTDGRSQDFVLEPSLAAAAAGIRLFAVGIGEA
LREELEEIAAEPKSAHVFHVTDFDAIDKIRGRLRRRLCENVLCPNMKVQAGRFRPNSTSA
GLTEVPGFDLMEYFNVRDFLGEKFEPGQTPYVRLGTMPIVQQTEDVLPQGLPDEYAFVTT
FKFRKTSRKEDWYLWQVYDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRAVFKNPEVDN
LFDRNWHKIGMRVDSKSVSLFLDCKHIETLPIEDREDIDIQGKTVIGKRLYDSVPIDFDL
QRMVIYCDGKQSEQETCCDIPGGPCEQSLATEAPPVPLPTPKPTSAEQKKPAAVNCSCPA
GERGETGLPGATGPKGEKGDPGLKGAEGPPGLKGQKGERGQAVSIKGDRGEKGDSGESGA
PGARGDKGERGSDGLPGLAGKQGDKGERGERGVAGEAGLPGPLGPKGIQGESGPPGAPGP
KGVSGGAGNKGDKGSPGNRGEPGLDGFPGKPGLPGKDGLRGLIGTPGPNGVKGEKGERGP
AGIPGDAVQLAGLKGETGFPGERGPPGADGPPGPPGAPGPQGPPGEPGENGQRGKKGDAG
LPGVDGLPGPPGPQGPLGPAGSPGQTGPPGLPGEIGFPGKLGEPGKPGLPGKDGLDGFPG
NDGEKGQRGEPGQDGFPGKPGPKGDEGPPGPRGPAGERGESGLAGQVGPMGPKGERGGQG
ERGKDGPTGSKGEKGDKGEVGPRGPAGVPGNVANVIPEPGEPGKPGEKGEKGDQGNPGET
GQRGLPGEQGFRGHPGPAGPKGDAGDKGEAGRPGDPGPPGLMGSQGPRGLPGNVGIPGSI
GPPGIAGQRGEKGDAGKDGPAGPPGPTGEPGLRGEIGLPGKGKEGAKGDTGPPGPAGPPG
LKGLPGPQGMQGMPGNRGPPGEGTTGPQGSSGPPGPPGAAGLRGPPGVSGPQGPAGHNGL
PGRPGEKGSPGEPGKAADLSDLKVTDICSDCPPGPPGQPGTPGAPGDKGHSGPPGKNGQD
GYAGPPGPTGPAGPPGADGTKGVKGDRGPPGTPGDKGEKGVPGPPGYPGAAGAMGQPGND
GNPGPIGAPGPPGEKGKEGLKGIQGPPGLPGLMGMMGKPGKDGRPGETGEPGKQGEPGTP
GRDGLRGMPGFKGHRGEPGPPGSKGEDGKQGVPGREGPPGKDGNNGPPGPEGMRGPRGEP
GQPGEPGPAGKPGSQGNPGQPGHKGEAGSPGLPGFPGPKGPSGPSGPIGPEGKQGMLGKP
GDRGQKGEKGDNGIKGDKGPVGDPGVPGNPGPPGRKGHTGMMGMSGPPGEVGPSGPPGSP
GHPGLPGLRGETPSLEQMRRLIQEELSKQLDAKLAYLMAQMQPAHIKSTAGRPGPPGPPG
KDGPPGRQGPAGEPGMPGQNGAEGSRGPVGPKGERGSKGDKGEDGVGQRGEPGPVGPIGP
AGMPGYGKDGLPGAAGAQGEPGNPGPHGQPGPPGPPGQCDPSQCAYYASLASRPHTKNVK
GT
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgattcggcctcaagatctctctggtcctggccatactggctctgactctg
tatggaagtggtgttgaaggacaaagggcaggttgcaagaacgtccactatgatttggta
ttcatcttggacacctcttccagtgtgggaaaggaaaactttgagaagatccggcagtgg
gtggcaaacctggtggaatcttttgatgtaggtgcggagaagacacgtgtggccgtggtt
cgctacagtgaccgccccaccgccgaattcaacctgggcaggtacaaaactctcgaggag
gtcaagcgtgccgctgggaacatccgctacctgggtgggaacaccaagactggagacgcc
atcagcttcaccaccaacaacatcttcacggagaggacaggggcaaggcctgccgccaag
ggtattcagaaagttgctatcttgctaacggatggcaggagtcaggattttgttttggag
ccatcgcttgctgcagcggctgctggaatcaggttgttcgctgtagggattggggaagct
cttagggaggagctggaggagatcgccgccgagcccaaaagtgctcatgtgttccacgtg
acggactttgacgccattgacaagatcaggggcaggttgaggaggagactctgcgagaat
gttctgtgtcccaacatgaaggtccaggcaggccgtttcagaccaaacagcaccagtgct
ggactgacggaggttccaggttttgatttgatggaatacttcaatgtaagagattttctt
ggagaaaaatttgagccaggtcagaccccgtatgtccggctcggtaccatgcccatcgtc
caacaaacagaagatgtcttgcctcagggtttgcctgatgaatatgcgtttgtgaccaca
tttaagttcaggaagacctcccgtaaggaagactggtacctgtggcaggtctatgacaaa
tacggcatcccacaggtgtccatccgtctggatggagagaacaaggcggtggagtacaac
gctgtgggcctgacgaaggacgcagtccgggcggtctttaagaacccagaggtggacaac
ctgtttgaccgtaactggcataagattggcatgagggtggactccaagtctgtgtccctt
ttcctggactgcaagcacattgagacgctgcccatagaggacagagaagacattgacatc
cagggaaagactgtcattggcaagagactctatgacagcgttcccattgattttgacctc
cagaggatggtgatctactgtgatggtaaacagtctgagcaggagacatgttgcgatatt
cctggtggcccatgtgaacaatctttggcgaccgaggcccccccagtcccgctgcccacc
ccaaaaccaacaagtgctgagcagaagaaaccagctgcggtcaactgctcctgtcctgca
ggggaaaggggtgagacaggtctaccgggtgccacagggcccaagggtgaaaagggggat
cctggtctaaaaggggcagaaggaccgccagggctcaaagggcagaaaggagaacgtggc
caggctgtctctatcaaaggtgatagaggagagaagggggacagcggcgagagcggtgca
cctggagctagaggtgacaaaggagaaagaggatcagatggtttaccaggtctggctggg
aaacaaggcgataagggagaaagaggtgaacgaggagttgcaggtgaagctgggttacct
ggacctcttggaccaaagggtatccaaggtgaatctggtccgcccggagcaccgggtcct
aaaggggtgtctggtggcgccggaaataaaggagacaaaggatcccccggaaataggggt
gaaccaggtttagatgggtttccagggaaaccaggtcttccaggaaaagatggtcttagg
gggctgattggcactccaggtccaaatggagtcaaaggagaaaagggtgaacgaggtcct
gctggaatacctggcgatgcggttcagttggcaggactcaagggggagactggcttccca
ggagaacgtggacccccaggagcggacggcccccctggacctcctggcgcacctggacct
caaggcccgcccggtgagcctggtgagaatggacaaaggggtaaaaaaggggacgcagga
ttgccgggagttgatggccttccaggtccacctggtcctcaggggcctcttggacctgct
ggcagccctggacagacgggacctccaggattacctggtgaaatcggcttcccaggaaaa
ctaggagaaccaggaaaaccaggcctgccaggaaaagatggattggatggtttccctgga
aacgacggcgagaaggggcaacgaggagaacccggacaggacggtttccctggtaaacca
gggccgaagggagatgagggccctccaggcccccgaggacctgctggtgaacggggagag
tctggtttggctgggcaggtcggcccaatgggacccaaaggagagagaggaggccaaggg
gagagaggaaaagatggacctactggctcaaaaggagagaaaggagacaagggtgaggtg
ggccccaggggtccggccggggtcccaggcaatgtggccaatgtgattcctgaacctggt
gaaccgggcaagccgggagagaagggagagaaaggagatcaaggaaatccaggcgagacg
ggtcaaagaggacttcctggagagcaggggttcagagggcatccaggacctgcgggccct
aagggtgatgctggtgataaaggagaagcagggagacccggagatccaggtccgcccgga
ttgatgggctctcaagggccccgagggctgccaggcaatgtgggtattccaggcagcatc
ggcccacctggtatcgctggacagagaggagagaagggtgatgcaggtaaagatggtcct
gctggaccccctggtccaaccggtgagcctggtttaagaggagaaatcggtttgccagga
aaaggcaaagagggagcaaagggtgatacaggacccccgggcccagccggacctcccgga
ctgaagggtttgcctggcccacagggaatgcagggaatgccaggaaacagaggaccaccg
ggagaaggaaccactggaccccaggggtcttcaggacctccgggaccaccaggagctgcg
ggtttgagaggacctcctggagtgagcggaccgcagggacccgctggacataatggttta
ccaggaagacctggagagaagggctcacctggagaaccaggaaaagctgcagacctttct
gatctgaaggtaacagacatttgttcagattgtccccctggaccgcctggacaaccaggt
actccaggagctccaggtgacaaaggccattctggaccacctgggaaaaacggacaggat
ggatatgcgggtcctcctggaccaacaggacccgcaggaccacctggtgctgatggaacc
aagggggtcaaaggtgacagaggtcctccaggaacacctggagataagggtgaaaagggc
gtcccaggacctcctggttatccgggggctgctggagccatgggtcaacctggtaatgat
ggaaaccctggacctattggagcacctggacctccaggagaaaagggtaaagaaggactg
aaaggtattcagggacctccaggcctgccaggtctaatgggcatgatgggtaaacctgga
aaggatggaagaccaggagaaacaggagagccaggtaaacagggagagccaggaacacca
ggaagagacggactcagaggaatgcctggtttcaaaggtcacaggggggaaccaggacca
ccagggtcaaagggtgaagatgggaagcagggtgttcctggacgtgagggtccacctggg
aaagatggtaacaacggaccaccagggccagagggcatgagaggaccacgaggagaaccg
ggtcaacctggagaaccaggaccagcaggcaagcccggatctcagggaaatcctggtcag
ccaggacacaagggtgaagcaggtagcccaggattacccggattcccaggtccaaaaggg
ccatcgggtccgtctggtccaattggcccagagggaaaacaaggcatgttaggaaaacca
ggagacagaggacagaagggagaaaagggtgataatggaataaaaggagacaaaggaccc
gttggagatccgggtgttccgggtaaccctgggcctcccggtaggaagggtcacacaggt
atgatgggcatgtcgggacccccaggggaagtgggtccctctgggccccctggttctcca
ggacacccgggactcccaggtctcagaggcgagacgccatcactggaacaaatgcggcgg
ctcattcaagaggaactttccaaacaactggatgctaaactagcttacctcatggctcaa
atgcaacccgctcatatcaagagcacggctggccgtcctggtccacctggtcctccagga
aaagacggacctcctggcagacaaggtccagctggagagcctggaatgcctggacaaaat
ggagcagaaggatccagaggtccagttggtcctaaaggtgaacgaggttcaaaaggtgac
aagggagaagatggtgttggacagagaggagagcctggtccagttggtcccattggtcct
gcaggtatgccaggatatggaaaagacggtcttcctggagctgcaggtgctcagggagag
cctggtaatcctggtcctcacggtcagcccggacctcctggaccaccaggacagtgcgac
ccctcacaatgtgcctactatgccagtctggcatcaagacctcacactaaaaacgtcaag
gggacttaa
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