Cellulosimicrobium sp. TH-20: B8281_02980
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Entry
B8281_02980 CDS
T04804
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cet
Cellulosimicrobium sp. TH-20
Pathway
cet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B8281_02980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cet03400
]
B8281_02980
Enzymes [BR:
cet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
B8281_02980
DNA repair and recombination proteins [BR:
cet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B8281_02980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
MCR_gamma
Motif
Other DBs
NCBI-ProteinID:
ARK03850
UniProt:
A0A1W6DLM9
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All DBs
Position
668872..669654
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AA seq
260 aa
AA seq
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MRIGAHLDQSDVIAQAASIGADVAQIFLGDPQSWKGPEFTFPGGAEALKDAAAAADLELV
VHAPYVINVASPNNRIRIPSRKLLQQIVDGAAAVGATGVVVHGGHVTAKEDPAMGFDNWR
KAIDALQTDVTVYIENTAGGDFSMARRLDRIEGLWAAVQQADGAENVGFCLDTCHAWAGG
IDLTTAVDDVRAITGRVDLVHLNNSRDTAGSGADRHAGLTAGTIDPELLLGVVRAAGTSV
VCETHADVPADVAWLREQVG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcggagcccacctcgaccagtcggacgtcatcgcgcaggcagcgagcatcggc
gcggacgtcgcccagatctttctcggcgacccccagtcgtggaagggtccggagttcacg
ttcccgggtggcgcggaggccctgaaggacgccgccgcggcggcggacctcgagctcgtc
gtgcacgcgccgtacgtcatcaacgtcgcgagccccaacaaccgcatccgcatcccgagc
cgcaagctgctccagcagatcgtggacggcgcggcggcggtcggcgcgacgggcgtcgtg
gtccacggcgggcacgtcaccgcgaaggaggacccggcgatgggcttcgacaactggcgc
aaggcgatcgacgcgctccagacggacgtcaccgtgtacatcgagaacaccgctggcggc
gacttctcgatggcccgccgcctcgaccgcatcgagggcctgtgggcggccgtgcagcag
gccgacggcgccgagaacgtcgggttctgcctcgacacgtgccacgcgtgggcgggcggc
atcgacctcacgacggcggtcgacgacgtgcgcgcgatcaccggccgcgtcgacctcgtc
cacctcaacaacagccgcgacaccgcgggctccggcgccgaccgccacgccggcctcacg
gccgggacgatcgacccggagctcctgctcggggtcgtgcgcgcggcgggcacgtcggtc
gtctgcgagacgcacgccgacgtcccggccgacgtcgcgtggctgcgcgagcaggtcggc
tga
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